MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82083 bp
Accession: NZ_CP071900 Location: 1..82083 Organism: Pseudomonas stutzeri isolate TPA3 Replicon: plasmid unnamed1
Accession: NZ_CP071900 Location: 1..82083 Organism: Pseudomonas stutzeri isolate TPA3 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4H94_RS20740 () | 785..1000 | + | 216 | WP_208218839.1 | hypothetical protein | - |
| J4H94_RS20745 () | 1080..1457 | + | 378 | WP_208218841.1 | hypothetical protein | - |
| J4H94_RS20750 () | 1498..1713 | + | 216 | WP_208218843.1 | hypothetical protein | - |
| J4H94_RS20755 () | 1726..1905 | + | 180 | WP_208218846.1 | hypothetical protein | - |
| J4H94_RS20760 () | 1919..2173 | + | 255 | WP_208218848.1 | hypothetical protein | - |
| J4H94_RS20765 () | 2302..2562 | + | 261 | WP_020308217.1 | hypothetical protein | - |
| J4H94_RS20770 () | 3753..4403 | - | 651 | WP_195883086.1 | hypothetical protein | - |
| J4H94_RS20775 () | 4396..5079 | - | 684 | WP_195883085.1 | P-loop NTPase | - |
| J4H94_RS20780 () | 5091..5567 | - | 477 | WP_208218850.1 | sigma-70 family RNA polymerase sigma factor | - |
| J4H94_RS20785 () | 5797..6099 | + | 303 | WP_208218852.1 | mobilization protein | - |
| J4H94_RS20790 () | 6096..8321 | + | 2226 | WP_208218853.1 | Protein TraI | Relaxase |
| J4H94_RS20795 () | 8382..8837 | + | 456 | WP_195883082.1 | DotD/TraH family lipoprotein | - |
| J4H94_RS20800 () | 8849..10312 | + | 1464 | WP_208218855.1 | hypothetical protein | VF |
| J4H94_RS20805 () | 10309..11976 | + | 1668 | WP_208218857.1 | Outer membrane lipoprotein BfpB | VF |
| J4H94_RS20810 () | 11979..13343 | + | 1365 | WP_208218859.1 | type 4b pilus protein PilO2 | - |
| J4H94_RS20815 () | 13330..13830 | + | 501 | WP_208218861.1 | type IV pilus biogenesis protein PilP | - |
| J4H94_RS20820 () | 13840..15384 | + | 1545 | WP_208218863.1 | Type II secretion system protein E | VF |
| J4H94_RS20825 () | 15384..16475 | + | 1092 | WP_208218873.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| J4H94_RS20830 () | 16502..17029 | + | 528 | WP_195883075.1 | pilus assembly protein PilX | - |
| J4H94_RS20835 () | 17011..17979 | + | 969 | WP_208218881.1 | putative protein YggR | VF |
| J4H94_RS20840 () | 17997..19196 | + | 1200 | WP_208218883.1 | hypothetical protein | VF |
| J4H94_RS20845 () | 21376..22542 | - | 1167 | WP_208218885.1 | tyrosine-type recombinase/integrase | - |
| J4H94_RS20850 () | 22514..22789 | - | 276 | WP_088193575.1 | helix-turn-helix domain-containing protein | - |
| J4H94_RS20855 () | 23618..23860 | - | 243 | WP_208218886.1 | hypothetical protein | - |
| J4H94_RS20860 () | 23985..24344 | - | 360 | WP_195883139.1 | hypothetical protein | - |
| J4H94_RS20865 () | 24419..25789 | - | 1371 | WP_195883138.1 | hypothetical protein | - |
| J4H94_RS20870 () | 25799..28015 | - | 2217 | WP_195883137.1 | hypothetical protein | VF |
| J4H94_RS20875 () | 28026..29306 | - | 1281 | WP_208218888.1 | DNA primase | - |
| J4H94_RS20880 () | 29335..30300 | - | 966 | WP_208218890.1 | thioredoxin fold domain-containing protein | - |
| J4H94_RS20885 () | 30302..31387 | - | 1086 | WP_208218897.1 | conjugal transfer protein TrbA | - |
| J4H94_RS20890 () | 31582..34077 | + | 2496 | WP_208218892.1 | topoisomerase C-terminal repeat-containing protein | - |
| J4H94_RS20895 () | 34074..34457 | + | 384 | WP_208218894.1 | hypothetical protein | - |
| J4H94_RS20900 () | 34457..34819 | + | 363 | WP_195883131.1 | hypothetical protein | - |
| J4H94_RS20905 () | 34816..35274 | + | 459 | WP_195883130.1 | hypothetical protein | - |
| J4H94_RS20910 () | 35835..41390 | + | 5556 | WP_208218896.1 | DEAD/DEAH box helicase family protein | - |
| J4H94_RS20915 () | 41647..41904 | + | 258 | WP_208218782.1 | hypothetical protein | - |
| J4H94_RS20920 () | 41998..42246 | + | 249 | WP_088192749.1 | Major pilu subunit operon regulatory protein PapB | VF |
| J4H94_RS20925 () | 42323..42574 | + | 252 | WP_178076964.1 | hypothetical protein | - |
| J4H94_RS20930 () | 42622..42801 | + | 180 | WP_088192750.1 | hypothetical protein | - |
| J4H94_RS20935 () | 42861..43043 | + | 183 | WP_208218783.1 | hypothetical protein | - |
| J4H94_RS20940 () | 43169..43585 | + | 417 | WP_208218785.1 | hypothetical protein | - |
| J4H94_RS20945 () | 43578..44186 | - | 609 | WP_208218786.1 | hypothetical protein | - |
| J4H94_RS20950 () | 44690..45214 | - | 525 | WP_208218788.1 | hypothetical protein | - |
| J4H94_RS20955 () | 45283..46119 | - | 837 | WP_208218790.1 | hypothetical protein | - |
| J4H94_RS20960 () | 46134..46406 | - | 273 | WP_208218798.1 | IcmT/TraK family protein | - |
| J4H94_RS20965 () | 46403..47560 | - | 1158 | WP_208218899.1 | Twitching mobility protein | VF |
| J4H94_RS20970 () | 47636..48166 | - | 531 | WP_195883117.1 | Soluble lytic murein transglycosylase | - |
| J4H94_RS20975 () | 48166..48597 | - | 432 | WP_195883116.1 | type IV pilus biogenesis protein PilM | - |
| J4H94_RS20980 () | 48600..49130 | - | 531 | WP_208218800.1 | hypothetical protein | - |
| J4H94_RS20985 () | 49161..51374 | - | 2214 | WP_208218802.1 | hypothetical protein | - |
| J4H94_RS20990 () | 51623..52162 | + | 540 | WP_088192768.1 | hypothetical protein | - |
| J4H94_RS20995 () | 52311..52826 | + | 516 | WP_208218901.1 | hypothetical protein | - |
| J4H94_RS21000 () | 52965..53276 | - | 312 | WP_208218804.1 | hypothetical protein | - |
| J4H94_RS21005 () | 53437..53859 | - | 423 | WP_088192770.1 | HicB family protein | Antitoxin Detail |
| J4H94_RS21010 () | 53896..54078 | - | 183 | WP_088192771.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J4H94_RS21015 () | 54343..55308 | + | 966 | WP_208218806.1 | DNA-binding protein | - |
| J4H94_RS21020 () | 55498..55635 | - | 138 | WP_208218808.1 | hypothetical protein | - |
| J4H94_RS21025 () | 55874..56401 | - | 528 | WP_208218810.1 | hypothetical protein | - |
| J4H94_RS21030 () | 56417..56773 | - | 357 | WP_208218811.1 | hypothetical protein | - |
| J4H94_RS21035 () | 56783..57364 | - | 582 | WP_208218813.1 | hypothetical protein | - |
| J4H94_RS21040 () | 57377..57727 | - | 351 | WP_088192782.1 | hypothetical protein | - |
| J4H94_RS21045 () | 57986..58372 | - | 387 | WP_208218815.1 | hypothetical protein | - |
| J4H94_RS21050 () | 58572..60491 | - | 1920 | WP_208218817.1 | hypothetical protein | - |
| J4H94_RS21055 () | 60525..61280 | - | 756 | WP_208218819.1 | hypothetical protein | - |
| J4H94_RS21060 () | 61292..61795 | - | 504 | WP_195883102.1 | hypothetical protein | - |
| J4H94_RS21065 () | 61930..64062 | - | 2133 | WP_195883144.1 | DotA/TraY family protein | - |
| J4H94_RS21070 () | 64106..64732 | - | 627 | WP_195883101.1 | hypothetical protein | - |
| J4H94_RS21075 () | 64732..65982 | - | 1251 | WP_208218821.1 | conjugal transfer protein TraW | - |
| J4H94_RS21080 () | 65979..69047 | - | 3069 | WP_208218823.1 | hypothetical protein | VF |
| J4H94_RS21085 () | 69057..69806 | - | 750 | WP_208218825.1 | HNH endonuclease | - |
| J4H94_RS21090 () | 69845..70303 | - | 459 | WP_088193954.1 | hypothetical protein | - |
| J4H94_RS21095 () | 70325..70858 | - | 534 | WP_195883098.1 | conjugal transfer protein TraQ | - |
| J4H94_RS21100 () | 70869..71720 | - | 852 | WP_208218827.1 | hypothetical protein | - |
| J4H94_RS21105 () | 71821..73047 | - | 1227 | WP_208218829.1 | conjugal transfer protein TraO | - |
| J4H94_RS21110 () | 73057..74190 | - | 1134 | WP_208218831.1 | hypothetical protein | VF |
| J4H94_RS21115 () | 74200..74970 | - | 771 | WP_208218902.1 | hypothetical protein | VF |
| J4H94_RS21120 () | 76022..77026 | + | 1005 | WP_208218904.1 | replication initiator protein A | - |
| J4H94_RS21125 () | 77361..77654 | + | 294 | WP_208218833.1 | hypothetical protein | - |
| J4H94_RS21130 () | 77971..78609 | + | 639 | WP_088193961.1 | Chromosome-partitioning ATPase Soj | VF |
| J4H94_RS21135 () | 78606..78884 | + | 279 | WP_088193962.1 | hypothetical protein | - |
| J4H94_RS21140 () | 79785..81545 | + | 1761 | WP_208218835.1 | DNA cytosine methyltransferase | - |
| J4H94_RS21145 () | 81542..81982 | + | 441 | WP_208218837.1 | ASCH domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|