MGE detailed information
MGE type: Genomic_island MGE length: 19649 bp
Accession: NZ_CP071840 Location: 149710..169358 Organism: Vibrio sp. SCSIO 43097 Replicon: chromosome
Accession: NZ_CP071840 Location: 149710..169358 Organism: Vibrio sp. SCSIO 43097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4N40_RS00725 (J4N40_00725) | 145007..146407 | - | 1401 | WP_005393772.1 | Si-specific NAD(P)(+) transhydrogenase | - |
| J4N40_RS00730 (J4N40_00730) | 146701..147342 | + | 642 | WP_005378632.1 | HTH-type transcriptional repressor FabR | - |
| J4N40_RS00735 (J4N40_00735) | 147342..147707 | + | 366 | WP_005378634.1 | YijD family membrane protein | - |
| J4N40_RS00740 (J4N40_00740) | 148003..149280 | + | 1278 | WP_025593104.1 | site-specific integrase | - |
| J4N40_RS00745 (J4N40_00745) | 149710..150615 | + | 906 | WP_025593100.1 | GGDEF domain-containing protein | - |
| J4N40_RS00750 (J4N40_00750) | 151085..152620 | - | 1536 | WP_250654334.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| J4N40_RS00755 (J4N40_00755) | 152989..154551 | + | 1563 | WP_140279175.1 | sensor domain-containing diguanylate cyclase | - |
| J4N40_RS00760 (J4N40_00760) | 154724..155512 | - | 789 | WP_025593094.1 | hypothetical protein | - |
| J4N40_RS00765 (J4N40_00765) | 155576..155929 | - | 354 | WP_025593093.1 | hypothetical protein | - |
| J4N40_RS00770 (J4N40_00770) | 155889..156299 | + | 411 | Protein_139 | DUF3387 domain-containing protein | - |
| J4N40_RS00775 (J4N40_00775) | 156407..157537 | - | 1131 | WP_140279176.1 | hypothetical protein | - |
| J4N40_RS00780 (J4N40_00780) | 157539..158966 | - | 1428 | WP_140279177.1 | hypothetical protein | - |
| J4N40_RS00785 (J4N40_00785) | 159033..159635 | - | 603 | WP_005393740.1 | penicillin-binding protein activator LpoB | - |
| J4N40_RS00790 (J4N40_00790) | 159644..161026 | - | 1383 | WP_025593641.1 | hypothetical protein | - |
| J4N40_RS00795 (J4N40_00795) | 161370..161837 | + | 468 | WP_025593642.1 | DNA repair protein RadC | - |
| J4N40_RS00800 (J4N40_00800) | 161834..162282 | + | 449 | Protein_145 | DUF2787 family protein | - |
| J4N40_RS00805 (J4N40_00805) | 162321..162752 | + | 432 | WP_140279178.1 | DUF2787 domain-containing protein | - |
| J4N40_RS00810 (J4N40_00810) | 162811..163020 | - | 210 | WP_025593645.1 | AlpA family transcriptional regulator | - |
| J4N40_RS00815 (J4N40_00815) | 163098..164087 | + | 990 | WP_025593646.1 | 50S ribosome-binding GTPase | - |
| J4N40_RS00820 (J4N40_00820) | 164197..164643 | + | 447 | WP_025593648.1 | hypothetical protein | - |
| J4N40_RS00825 (J4N40_00825) | 164683..165327 | - | 645 | WP_025593649.1 | inovirus Gp2 family protein | - |
| J4N40_RS00830 (J4N40_00830) | 165510..166526 | - | 1017 | WP_229644735.1 | hypothetical protein | - |
| J4N40_RS00835 (J4N40_00835) | 166671..167342 | + | 672 | WP_025593651.1 | hypothetical protein | - |
| J4N40_RS00840 (J4N40_00840) | 167671..168138 | + | 468 | WP_005378671.1 | DUF4065 domain-containing protein | Antitoxin Detail |
| J4N40_RS00845 (J4N40_00845) | 168135..169358 | + | 1224 | WP_025593654.1 | RelA/SpoT domain-containing protein | Toxin Detail |
| J4N40_RS00850 (J4N40_00850) | 169550..170659 | - | 1110 | WP_064376997.1 | tRNA (uridine(54)-C5)-methyltransferase TrmA | - |
| J4N40_RS00855 (J4N40_00855) | 171100..172935 | + | 1836 | WP_054579652.1 | TonB-dependent vitamin B12 receptor | - |
| J4N40_RS00860 (J4N40_00860) | 172995..173687 | + | 693 | WP_005378675.1 | ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|