MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 116562 bp
Accession: NZ_CP071806 Location: 360173..476734 Organism: Streptococcus suis strain GX69 Replicon: chromosome
Accession: NZ_CP071806 Location: 360173..476734 Organism: Streptococcus suis strain GX69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JZ789_RS01885 | 359853..360044 | - | 192 | Protein_328 | transposase | - |
| JZ789_RS01890 (JZ789_01875) | 360341..361693 | - | 1353 | WP_170244879.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| JZ789_RS01895 (JZ789_01880) | 361731..362507 | + | 777 | WP_170244878.1 | recombination regulator RecX | - |
| JZ789_RS01900 (JZ789_01885) | 362773..363936 | - | 1164 | Protein_331 | IS30 family transposase | - |
| JZ789_RS01905 (JZ789_01890) | 364134..364775 | + | 642 | WP_024394531.1 | amino acid ABC transporter permease | - |
| JZ789_RS01910 (JZ789_01895) | 364785..365417 | + | 633 | WP_009909533.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| JZ789_RS01915 (JZ789_01900) | 365444..366274 | + | 831 | WP_024381444.1 | amino acid ABC transporter substrate-binding protein | - |
| JZ789_RS01920 (JZ789_01905) | 366888..368144 | - | 1257 | WP_225533399.1 | IS110 family transposase ISSsu7 | Transposase |
| JZ789_RS01925 (JZ789_01910) | 368429..369592 | - | 1164 | WP_011921673.1 | IS110 family transposase ISAzo28 | Transposase |
| JZ789_RS01930 | 370143..370427 | + | 285 | Protein_337 | ISL3 family transposase | - |
| JZ789_RS01935 (JZ789_01915) | 370954..371592 | - | 639 | WP_024394530.1 | MBL fold metallo-hydrolase | - |
| JZ789_RS01940 (JZ789_01920) | 371709..374168 | + | 2460 | WP_225533321.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| JZ789_RS01945 (JZ789_01925) | 374332..375408 | + | 1077 | WP_024394528.1 | glutamate 5-kinase | - |
| JZ789_RS01950 (JZ789_01930) | 375473..376711 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JZ789_RS01955 (JZ789_01935) | 376721..377506 | + | 786 | WP_024394527.1 | pyrroline-5-carboxylate reductase | - |
| JZ789_RS01960 (JZ789_01940) | 377529..377933 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| JZ789_RS01965 (JZ789_01945) | 378060..378911 | + | 852 | WP_014636868.1 | DegV family protein | - |
| JZ789_RS01970 (JZ789_01950) | 379010..380269 | - | 1260 | WP_013730273.1 | PLP-dependent aminotransferase family protein | - |
| JZ789_RS01975 (JZ789_01955) | 380392..381126 | + | 735 | WP_024381470.1 | peroxide stress protein YaaA | - |
| JZ789_RS01980 (JZ789_01960) | 381256..382695 | + | 1440 | WP_013730275.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagT | VF |
| JZ789_RS01985 (JZ789_01965) | 382711..383400 | + | 690 | WP_013730276.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| JZ789_RS01990 (JZ789_01970) | 383410..384096 | + | 687 | WP_013730277.1 | Tyrosine-protein kinase CpsD | VF |
| JZ789_RS01995 (JZ789_01975) | 384135..384866 | + | 732 | WP_013730278.1 | Tyrosine-protein phosphatase CpsB | VF |
| JZ789_RS02000 (JZ789_01980) | 384896..386722 | + | 1827 | WP_024390822.1 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | VF |
| JZ789_RS02005 (JZ789_01985) | 387167..387865 | + | 699 | WP_014636873.1 | UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase | VF |
| JZ789_RS02010 (JZ789_01990) | 387875..389089 | + | 1215 | WP_014636874.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
| JZ789_RS02015 (JZ789_01995) | 389107..389892 | + | 786 | WP_014636875.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| JZ789_RS02020 (JZ789_02000) | 389924..390976 | + | 1053 | WP_024406033.1 | glycosyltransferase family 4 protein | - |
| JZ789_RS02025 (JZ789_02005) | 390992..391615 | + | 624 | WP_024406032.1 | hypothetical protein | - |
| JZ789_RS02030 (JZ789_02010) | 391612..392472 | + | 861 | WP_024406031.1 | putative glycosyltransferase EpsJ | VF |
| JZ789_RS02035 (JZ789_02015) | 392520..393794 | + | 1275 | WP_212753033.1 | O-antigen polymerase | - |
| JZ789_RS02040 (JZ789_02020) | 393812..395251 | + | 1440 | WP_024406029.1 | oligosaccharide flippase family protein | - |
| JZ789_RS02045 (JZ789_02025) | 395309..396556 | + | 1248 | WP_024406028.1 | UDP-glucose 6-dehydrogenase | VF |
| JZ789_RS02050 (JZ789_02030) | 396668..397945 | - | 1278 | Protein_361 | transposase | - |
| JZ789_RS02055 (JZ789_02035) | 398154..399410 | + | 1257 | WP_226316941.1 | ISL3 family transposase IS1193D | Transposase |
| JZ789_RS02060 (JZ789_02040) | 399419..400348 | - | 930 | WP_170244869.1 | IS66 family transposase ISCce5 | Transposase |
| JZ789_RS02065 (JZ789_02045) | 400302..400502 | - | 201 | WP_013730290.1 | IS66 family transposase ISBthe6 | Transposase |
| JZ789_RS02070 (JZ789_02050) | 400575..400712 | - | 138 | Protein_365 | IS110 family transposase | - |
| JZ789_RS02075 (JZ789_02055) | 400788..400973 | + | 186 | WP_013730291.1 | hypothetical protein | - |
| JZ789_RS02080 (JZ789_02060) | 401005..401901 | - | 897 | WP_013730292.1 | Tyrosine recombinase XerC | VF |
| JZ789_RS02085 (JZ789_02065) | 401997..403238 | + | 1242 | WP_014636889.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| JZ789_RS02090 | 403222..404130 | - | 909 | WP_226315297.1 | tetratricopeptide repeat protein | - |
| JZ789_RS02095 | 404149..405501 | - | 1353 | WP_225533320.1 | ATP-binding protein | - |
| JZ789_RS02100 (JZ789_02075) | 405716..406996 | + | 1281 | WP_014636887.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| JZ789_RS02105 (JZ789_02080) | 407005..407496 | + | 492 | WP_024393608.1 | shikimate kinase | - |
| JZ789_RS02110 (JZ789_02085) | 407487..408314 | + | 828 | WP_024381706.1 | prephenate dehydratase | - |
| JZ789_RS02115 (JZ789_02090) | 408326..409648 | + | 1323 | WP_013730298.1 | LCP family protein | - |
| JZ789_RS02120 (JZ789_02095) | 409715..411076 | + | 1362 | WP_024394786.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| JZ789_RS02125 (JZ789_02100) | 411287..411427 | + | 141 | WP_002935125.1 | hypothetical protein | - |
| JZ789_RS02130 (JZ789_02105) | 411424..412227 | + | 804 | WP_024394785.1 | replication initiator protein A | - |
| JZ789_RS02135 (JZ789_02110) | 412376..413731 | + | 1356 | WP_226316942.1 | DNA (cytosine-5-)-methyltransferase | - |
| JZ789_RS02140 (JZ789_02115) | 413715..414143 | + | 429 | WP_002935122.1 | hypothetical protein | - |
| JZ789_RS02145 (JZ789_02120) | 414154..414537 | + | 384 | WP_002935121.1 | hypothetical protein | - |
| JZ789_RS02150 (JZ789_02125) | 414546..414779 | + | 234 | WP_002935120.1 | hypothetical protein | - |
| JZ789_RS02155 (JZ789_02130) | 414782..415366 | + | 585 | WP_002935119.1 | CPBP family intramembrane metalloprotease | - |
| JZ789_RS02160 (JZ789_02135) | 415444..415932 | + | 489 | WP_002935118.1 | hypothetical protein | - |
| JZ789_RS02165 (JZ789_02140) | 415932..417749 | + | 1818 | WP_002935117.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JZ789_RS02170 (JZ789_02145) | 417767..418009 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| JZ789_RS02175 (JZ789_02150) | 418028..418882 | + | 855 | WP_002935114.1 | conjugal transfer protein TrbL | - |
| JZ789_RS02180 (JZ789_02155) | 418944..419297 | + | 354 | WP_002935113.1 | PrgI family protein | - |
| JZ789_RS02185 (JZ789_02160) | 419275..420747 | + | 1473 | WP_226315517.1 | type VI secretion protein | - |
| JZ789_RS02190 (JZ789_02165) | 421274..422947 | + | 1674 | WP_044680551.1 | group II intron reverse transcriptase/maturase | - |
| JZ789_RS02195 (JZ789_02170) | 423033..423914 | + | 882 | Protein_390 | AAA family ATPase | - |
| JZ789_RS02200 (JZ789_02175) | 423916..426717 | + | 2802 | WP_226316943.1 | phage tail tip lysozyme | - |
| JZ789_RS02205 (JZ789_02180) | 426783..427889 | + | 1107 | WP_023370120.1 | ImmA/IrrE family metallo-endopeptidase | - |
| JZ789_RS02210 (JZ789_02185) | 427893..428393 | + | 501 | WP_023370122.1 | DUF4411 family protein | - |
| JZ789_RS02215 (JZ789_02190) | 428811..433706 | + | 4896 | WP_226316908.1 | Agglutinin receptor | VF |
| JZ789_RS02220 (JZ789_02195) | 433707..433898 | + | 192 | WP_001068448.1 | calcium-binding protein | - |
| JZ789_RS02225 (JZ789_02200) | 433882..434433 | + | 552 | WP_023370126.1 | hypothetical protein | - |
| JZ789_RS02230 (JZ789_02205) | 434484..439946 | + | 5463 | WP_226316944.1 | SNF2-related protein | - |
| JZ789_RS02235 (JZ789_02210) | 440444..442222 | + | 1779 | WP_023370130.1 | reverse transcriptase/maturase family protein | - |
| JZ789_RS02240 (JZ789_02215) | 442315..443703 | + | 1389 | Protein_399 | helicase C-terminal domain-containing protein | - |
| JZ789_RS02245 (JZ789_02220) | 443774..444073 | + | 300 | WP_002935086.1 | DUF5962 family protein | - |
| JZ789_RS02250 (JZ789_02225) | 444087..444377 | + | 291 | WP_226316945.1 | DUF5966 family protein | - |
| JZ789_RS02255 (JZ789_02230) | 444473..445204 | + | 732 | WP_170244803.1 | peptidylprolyl isomerase | - |
| JZ789_RS02260 (JZ789_02235) | 445144..445518 | + | 375 | WP_001140406.1 | TnpV protein | - |
| JZ789_RS02265 (JZ789_02240) | 445885..447804 | + | 1920 | WP_170244804.1 | Tetracycline resistance protein TetO | VF |
| JZ789_RS02270 (JZ789_02245) | 447859..448029 | + | 171 | WP_004614788.1 | cysteine-rich KTR domain-containing protein | - |
| JZ789_RS02275 (JZ789_02250) | 448517..449029 | + | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| JZ789_RS02280 (JZ789_02255) | 449124..449549 | + | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| JZ789_RS02285 | 449633..449803 | + | 171 | WP_000331638.1 | hypothetical protein | - |
| JZ789_RS02290 | 449894..450010 | + | 117 | Protein_409 | RNA polymerase subunit sigma | - |
| JZ789_RS02295 (JZ789_02265) | 450262..451287 | + | 1026 | WP_001170964.1 | AAA family ATPase | - |
| JZ789_RS02300 (JZ789_02270) | 451812..452776 | + | 965 | Protein_411 | plasmid recombination protein | - |
| JZ789_RS02305 (JZ789_02275) | 452785..453639 | + | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| JZ789_RS02310 (JZ789_02280) | 453685..453915 | + | 231 | WP_001206986.1 | PC4/YdbC family ssDNA-binding protein | - |
| JZ789_RS02315 (JZ789_02285) | 453915..454178 | + | 264 | WP_000253176.1 | hypothetical protein | - |
| JZ789_RS02320 (JZ789_02290) | 454233..454409 | + | 177 | WP_002935078.1 | hypothetical protein | - |
| JZ789_RS02325 (JZ789_02295) | 454423..454683 | - | 261 | Protein_416 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| JZ789_RS02330 (JZ789_02300) | 454853..455590 | - | 738 | WP_002321849.1 | rRNA adenine N-6-methyltransferase | ARG |
| JZ789_RS02335 (JZ789_02305) | 455715..455810 | - | 96 | WP_001809736.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| JZ789_RS02340 (JZ789_02310) | 455859..456092 | - | 234 | WP_020220349.1 | peptide-binding protein | - |
| JZ789_RS02345 (JZ789_02315) | 456190..457086 | - | 897 | WP_001809760.1 | ParA family protein | - |
| JZ789_RS02350 (JZ789_02320) | 457212..458855 | + | 1644 | WP_230334541.1 | hypothetical protein ; Integrase | Integrase |
| JZ789_RS02355 (JZ789_02325) | 458919..459995 | + | 1077 | WP_226316946.1 | toprim domain-containing protein | - |
| JZ789_RS02360 (JZ789_02330) | 460049..460276 | + | 228 | WP_000110921.1 | DUF5965 family protein | - |
| JZ789_RS02365 (JZ789_02335) | 460273..460662 | + | 390 | WP_002935071.1 | DUF5945 family protein | - |
| JZ789_RS02370 (JZ789_02340) | 460712..461002 | + | 291 | WP_044666847.1 | hypothetical protein | - |
| JZ789_RS02375 (JZ789_02345) | 461071..461547 | + | 477 | WP_170244761.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| JZ789_RS02380 (JZ789_02350) | 461547..462314 | + | 768 | WP_170244762.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| JZ789_RS02385 (JZ789_02355) | 462380..464092 | + | 1713 | WP_170244763.1 | hypothetical protein | - |
| JZ789_RS02390 (JZ789_02360) | 464503..464862 | + | 360 | WP_170244764.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| JZ789_RS02395 (JZ789_02365) | 464872..465237 | + | 366 | WP_018163914.1 | plasmid mobilization relaxosome protein MobC | - |
| JZ789_RS02400 (JZ789_02370) | 465224..467086 | + | 1863 | WP_170244765.1 | SAG1250 family conjugative relaxase | - |
| JZ789_RS02410 (JZ789_02380) | 468469..469122 | + | 654 | WP_170244767.1 | PIG-L family deacetylase | - |
| JZ789_RS02415 (JZ789_02385) | 469112..469960 | + | 849 | WP_170244768.1 | nucleoside-diphosphate kinase | - |
| JZ789_RS02420 (JZ789_02390) | 469950..470699 | + | 750 | WP_170244769.1 | class I SAM-dependent methyltransferase | - |
| JZ789_RS02425 (JZ789_02395) | 470730..472010 | + | 1281 | WP_170244770.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| JZ789_RS02430 (JZ789_02400) | 471976..472953 | + | 978 | WP_170244771.1 | phosphotransferase | - |
| JZ789_RS02435 | 472950..476099 | + | 3150 | WP_226315501.1 | hypothetical protein | - |
| JZ789_RS02440 (JZ789_02410) | 476139..477365 | + | 1227 | WP_170244772.1 | glycosyltransferase | - |
| JZ789_RS02445 (JZ789_02415) | 477426..478541 | + | 1116 | WP_170244773.1 | 3-dehydroquinate synthase | - |
| JZ789_RS02450 (JZ789_02420) | 478534..479742 | + | 1209 | WP_170244774.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| JZ789_RS02455 (JZ789_02425) | 479732..481201 | + | 1470 | WP_170244775.1 | GMC family oxidoreductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|