MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103906 bp
Accession: NZ_CP071804 Location: 1..103906 Organism: Yersinia ruckeri strain KMM821 Replicon: plasmid pYRKMM821_2
Accession: NZ_CP071804 Location: 1..103906 Organism: Yersinia ruckeri strain KMM821 Replicon: plasmid pYRKMM821_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YR821_RS17185 (YR821_p20001) | 1..2703 | - | 2703 | WP_004720844.1 | hypothetical protein | - |
| YR821_RS17190 (YR821_p20002) | 3083..4132 | - | 1050 | WP_038251856.1 | Abi family protein | - |
| YR821_RS17195 (YR821_p20003) | 4429..6354 | - | 1926 | WP_004720847.1 | Protein TraI | Relaxase |
| YR821_RS17200 (YR821_p20004) | 6356..6700 | - | 345 | WP_004720848.1 | plasmid mobilization protein MobA | - |
| YR821_RS17205 (YR821_p20005) | 6969..7292 | + | 324 | WP_004720850.1 | hypothetical protein | - |
| YR821_RS17210 (YR821_p20007) | 7831..8649 | - | 819 | WP_004720855.1 | DUF932 domain-containing protein | - |
| YR821_RS17215 (YR821_p20009) | 9083..9379 | - | 297 | WP_004720859.1 | NadS family protein | Antitoxin Detail |
| YR821_RS17220 (YR821_p20010) | 9425..9748 | - | 324 | WP_038251855.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| YR821_RS17225 (YR821_p20011) | 9900..10133 | + | 234 | WP_038251853.1 | hypothetical protein | - |
| YR821_RS17230 (YR821_p20012) | 10141..10515 | - | 375 | WP_004720865.1 | hypothetical protein | - |
| YR821_RS17235 (YR821_p20013) | 10604..11299 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| YR821_RS17240 (YR821_p20015) | 11840..13039 | + | 1200 | WP_038251850.1 | AAA family ATPase | - |
| YR821_RS17245 (YR821_p20016) | 13048..14016 | + | 969 | WP_004723386.1 | ParB family protein | - |
| YR821_RS17250 (YR821_p20018) | 14468..14791 | - | 324 | Protein_13 | integrase core domain-containing protein | - |
| YR821_RS17255 (YR821_p20019) | 14856..15551 | - | 696 | WP_038251906.1 | IS6 family transposase ISYps1 | Transposase |
| YR821_RS17260 (YR821_p20020) | 15834..17174 | - | 1341 | WP_049688270.1 | hypothetical protein | - |
| YR821_RS17265 (YR821_p20021) | 17175..17771 | - | 597 | WP_038251904.1 | hypothetical protein | - |
| YR821_RS17275 (YR821_p20025) | 19610..20695 | + | 1086 | WP_038251900.1 | hypothetical protein | - |
| YR821_RS17280 (YR821_p20026) | 20850..22211 | - | 1362 | WP_004722020.1 | hypothetical protein | - |
| YR821_RS17285 (YR821_p20027) | 22766..23128 | + | 363 | WP_004722021.1 | hypothetical protein | - |
| YR821_RS17290 (YR821_p20028) | 23182..23883 | + | 702 | WP_004722022.1 | hypothetical protein | - |
| YR821_RS17295 (YR821_p20029) | 23885..24664 | + | 780 | WP_004722026.1 | tyrosine-type recombinase/integrase | - |
| YR821_RS17300 (YR821_p20030) | 24896..26575 | + | 1680 | WP_004722028.1 | IS3 family transposase ISXca2 | Transposase |
| YR821_RS17305 (YR821_p20031) | 26578..27486 | + | 909 | WP_004722030.1 | TniB family NTP-binding protein | - |
| YR821_RS17310 (YR821_p20032) | 27483..28703 | + | 1221 | WP_049688202.1 | TniQ family protein | - |
| YR821_RS17315 (YR821_p20033) | 28700..29020 | - | 321 | WP_038251894.1 | hypothetical protein | - |
| YR821_RS17320 (YR821_p20034) | 29048..29788 | - | 741 | WP_038251931.1 | tyrosine-type recombinase/integrase | - |
| YR821_RS17325 (YR821_p20035) | 30215..33472 | + | 3258 | WP_004722039.1 | P-loop NTPase fold protein | - |
| YR821_RS17330 (YR821_p20036) | 33570..35072 | + | 1503 | WP_004722040.1 | DUF4041 domain-containing protein | - |
| YR821_RS17335 (YR821_p20037) | 35361..36008 | + | 648 | WP_038251892.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| YR821_RS17340 (YR821_p20038) | 36320..36616 | - | 297 | WP_038251890.1 | hypothetical protein | - |
| YR821_RS17345 (YR821_p20039) | 37015..37785 | + | 771 | WP_004722046.1 | HEPN domain-containing protein | - |
| YR821_RS17350 (YR821_p20040) | 37823..38233 | + | 411 | Protein_33 | IS6 family transposase IS1635 | Transposase |
| YR821_RS17355 | 38267..38566 | - | 300 | WP_050777622.1 | hypothetical protein | - |
| YR821_RS17360 (YR821_p20041) | 38707..41519 | - | 2813 | Protein_35 | Tn3 family transposase ISPsy42 | Transposase |
| YR821_RS17365 (YR821_p20043) | 41686..42306 | + | 621 | WP_004722053.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| YR821_RS17370 (YR821_p20044) | 42303..44954 | + | 2652 | WP_115175337.1 | AAA family ATPase | - |
| YR821_RS17375 (YR821_p20045) | 45161..45514 | + | 354 | Protein_38 | ISKra4 family transposase ISKpn19 | Transposase |
| YR821_RS17380 (YR821_p20046) | 45624..46772 | - | 1149 | WP_038251888.1 | putative DNA binding domain-containing protein | - |
| YR821_RS17385 (YR821_p20047) | 46751..49378 | - | 2628 | WP_004722060.1 | hypothetical protein | - |
| YR821_RS17390 | 49406..49790 | - | 385 | Protein_41 | type I restriction endonuclease subunit M | - |
| YR821_RS17395 (YR821_p20051) | 49843..50082 | - | 240 | WP_004722063.1 | hypothetical protein | - |
| YR821_RS17400 (YR821_p20052) | 50504..51709 | + | 1206 | WP_004722065.1 | IS91 family transposase ISVa3 | Transposase |
| YR821_RS17405 (YR821_p20053) | 52086..52985 | - | 900 | WP_139127572.1 | hypothetical protein | - |
| YR821_RS17410 (YR821_p20055) | 53896..54546 | - | 651 | WP_040155137.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| YR821_RS17415 (YR821_p20056) | 54667..57645 | + | 2979 | WP_004723380.1 | Tn3 family transposase TnBth2 | Transposase |
| YR821_RS17420 (YR821_p20057) | 57712..57807 | - | 96 | Protein_47 | IS6 family transposase | - |
| YR821_RS17425 | 57872..57964 | + | 93 | Protein_48 | helix-turn-helix domain-containing protein | - |
| YR821_RS17430 (YR821_p20058) | 58027..58380 | + | 354 | WP_038251884.1 | hypothetical protein | - |
| YR821_RS17435 (YR821_p20059) | 58610..59362 | + | 753 | WP_069971731.1 | HEAT repeat domain-containing protein | - |
| YR821_RS17440 (YR821_p20060) | 60466..61563 | - | 1098 | WP_230596536.1 | Replication protein | - |
| YR821_RS17445 (YR821_p20062) | 62312..63022 | + | 711 | WP_004720782.1 | PAS domain-containing protein | - |
| YR821_RS17450 (YR821_p20063) | 63079..63240 | - | 162 | WP_004720783.1 | hypothetical protein | - |
| YR821_RS17455 (YR821_p20065) | 63537..63908 | - | 372 | WP_004720785.1 | helix-turn-helix transcriptional regulator | - |
| YR821_RS17460 (YR821_p20066) | 64199..64708 | + | 510 | WP_004720786.1 | transcription termination/antitermination NusG family protein | - |
| YR821_RS17465 (YR821_p20068) | 64935..65636 | + | 702 | WP_004720789.1 | DUF2913 family protein | - |
| YR821_RS17470 (YR821_p20069) | 65699..65899 | + | 201 | WP_004720790.1 | hypothetical protein | - |
| YR821_RS17475 (YR821_p20070) | 65977..67020 | + | 1044 | WP_072012918.1 | hypothetical protein | VF |
| YR821_RS17480 (YR821_p20071) | 67020..67445 | + | 426 | WP_049688159.1 | type IV pilus biogenesis protein PilM | - |
| YR821_RS17485 (YR821_p20072) | 67466..69088 | + | 1623 | WP_004720794.1 | Outer membrane lipoprotein BfpB | VF |
| YR821_RS17490 (YR821_p20073) | 69163..69816 | + | 654 | WP_143715016.1 | hypothetical protein | - |
| YR821_RS17495 (YR821_p20074) | 69820..71133 | + | 1314 | WP_038251882.1 | type 4b pilus protein PilO2 | - |
| YR821_RS17500 (YR821_p20075) | 71120..71707 | + | 588 | WP_049688157.1 | hypothetical protein | VF |
| YR821_RS17505 (YR821_p20076) | 71711..73204 | + | 1494 | WP_069971730.1 | Type II secretion system protein E | VF |
| YR821_RS17510 (YR821_p20077) | 73201..74343 | + | 1143 | WP_230596535.1 | hypothetical protein | VF |
| YR821_RS17515 (YR821_p20078) | 74381..74974 | + | 594 | WP_038251880.1 | hypothetical protein | VF |
| YR821_RS17520 (YR821_p20079) | 75036..75521 | + | 486 | WP_004720806.1 | hypothetical protein | VF |
| YR821_RS17525 (YR821_p20080) | 75521..76171 | + | 651 | WP_038251878.1 | hypothetical protein | VF |
| YR821_RS17530 (YR821_p20081) | 76168..77541 | + | 1374 | WP_099511713.1 | hypothetical protein | VF |
| YR821_RS17535 (YR821_p20082) | 78067..78522 | + | 456 | WP_004720812.1 | hypothetical protein | VF |
| YR821_RS17540 (YR821_p20083) | 78519..79307 | + | 789 | WP_038251876.1 | hypothetical protein | VF |
| YR821_RS17545 (YR821_p20084) | 79307..80461 | + | 1155 | WP_004720814.1 | Twitching mobility protein | VF |
| YR821_RS17550 (YR821_p20085) | 80458..80718 | + | 261 | WP_038251874.1 | IcmT/TraK family protein | - |
| YR821_RS17555 (YR821_p20086) | 80734..84087 | + | 3354 | WP_004720815.1 | DUF5710 domain-containing protein | - |
| YR821_RS17560 (YR821_p20087) | 84092..84550 | + | 459 | WP_049688154.1 | hypothetical protein | - |
| YR821_RS17565 (YR821_p20088) | 84567..85289 | + | 723 | WP_004720818.1 | DotI/IcmL/TraM family protein | - |
| YR821_RS17570 (YR821_p20089) | 85308..86303 | + | 996 | WP_038251870.1 | hypothetical protein | VF |
| YR821_RS17575 (YR821_p20090) | 86306..87559 | + | 1254 | WP_004720823.1 | conjugal transfer protein TraO | - |
| YR821_RS17580 (YR821_p20091) | 87619..88326 | + | 708 | WP_126940165.1 | hypothetical protein | - |
| YR821_RS17585 (YR821_p20092) | 88326..88853 | + | 528 | WP_038251868.1 | conjugal transfer protein TraQ | - |
| YR821_RS17590 (YR821_p20093) | 88878..89261 | + | 384 | WP_004720828.1 | hypothetical protein | - |
| YR821_RS17595 (YR821_p20094) | 89322..90278 | + | 957 | WP_004720829.1 | hypothetical protein | - |
| YR821_RS17600 (YR821_p20095) | 90301..93378 | + | 3078 | WP_038251865.1 | conjugal transfer protein | - |
| YR821_RS17605 (YR821_p20096) | 93392..94585 | + | 1194 | WP_004720831.1 | conjugal transfer protein TraW | - |
| YR821_RS17610 (YR821_p20097) | 94585..95190 | + | 606 | WP_038251864.1 | conjugal transfer protein TraX | - |
| YR821_RS17615 (YR821_p20098) | 95257..97398 | + | 2142 | WP_004720832.1 | DotA/TraY family protein | - |
| YR821_RS17620 (YR821_p20099) | 97504..97722 | + | 219 | WP_038251862.1 | plasmid stabilization protein | - |
| YR821_RS17625 (YR821_p20100) | 97744..98424 | + | 681 | WP_038251860.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| YR821_RS17630 (YR821_p20101) | 98520..99803 | + | 1284 | WP_004720838.1 | hypothetical protein | - |
| YR821_RS17635 (YR821_p20102) | 99808..100872 | + | 1065 | WP_004720840.1 | DsbC family protein | - |
| YR821_RS17640 (YR821_p20103) | 100883..103183 | + | 2301 | WP_049688149.1 | hypothetical protein | VF |
| YR821_RS17645 (YR821_p20104) | 103270..103806 | + | 537 | WP_038251858.1 | Phospholipase D | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|