MGE detailed information
MGE type: Prophage MGE length: 37560 bp
Accession: NZ_CP071750 Location: 2394407..2431966 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Accession: NZ_CP071750 Location: 2394407..2431966 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3B47_RS28170 (J3B47_28170) | 2390623..2392092 | - | 1470 | WP_038754871.1 | efflux RND transporter periplasmic adaptor subunit | - |
| J3B47_RS28175 (J3B47_28175) | 2392103..2393488 | - | 1386 | WP_004524132.1 | TolC family protein | - |
| J3B47_RS28180 (J3B47_28180) | 2393723..2394007 | - | 285 | WP_004532722.1 | hypothetical protein | - |
| J3B47_RS28185 (J3B47_28185) | 2394407..2394547 | - | 141 | WP_004524134.1 | bacteriophage protein | - |
| J3B47_RS28190 (J3B47_28190) | 2395241..2395729 | - | 489 | WP_004528293.1 | adenosine-specific kinase | - |
| J3B47_RS28195 (J3B47_28195) | 2396061..2396546 | + | 486 | WP_004197880.1 | YbaK/EbsC family protein | - |
| J3B47_RS28200 (J3B47_28200) | 2396724..2397062 | - | 339 | WP_009897097.1 | DUF3693 domain-containing protein | - |
| J3B47_RS28205 (J3B47_28205) | 2397452..2398225 | + | 774 | WP_229653442.1 | hypothetical protein | - |
| J3B47_RS28210 (J3B47_28210) | 2398541..2398762 | + | 222 | WP_009897093.1 | hypothetical protein | - |
| J3B47_RS28215 (J3B47_28215) | 2398990..2399127 | + | 138 | WP_006027274.1 | hypothetical protein | - |
| J3B47_RS28220 (J3B47_28220) | 2399284..2399502 | + | 219 | WP_023358395.1 | hypothetical protein | - |
| J3B47_RS28225 (J3B47_28225) | 2399755..2401182 | + | 1428 | WP_207866375.1 | DNA cytosine methyltransferase | - |
| J3B47_RS28230 (J3B47_28230) | 2401182..2402975 | + | 1794 | WP_038778439.1 | replication endonuclease | - |
| J3B47_RS28235 (J3B47_28235) | 2402991..2403257 | + | 267 | WP_004532697.1 | ogr/Delta-like zinc finger family protein | - |
| J3B47_RS28240 (J3B47_28240) | 2403254..2403460 | + | 207 | WP_004532731.1 | ogr/Delta-like zinc finger family protein | - |
| J3B47_RS28245 (J3B47_28245) | 2403550..2404203 | + | 654 | WP_004532770.1 | Chromosome-partitioning ATPase Soj | VF |
| J3B47_RS32295 | 2404278..2404559 | + | 282 | WP_015985021.1 | hypothetical protein | - |
| J3B47_RS28255 (J3B47_28255) | 2404662..2405195 | + | 534 | WP_004532793.1 | PAAR domain-containing protein | - |
| J3B47_RS28260 (J3B47_28260) | 2405192..2405929 | + | 738 | WP_004532838.1 | VRR-NUC domain-containing protein | - |
| J3B47_RS28265 (J3B47_28265) | 2405944..2407059 | + | 1116 | WP_029670743.1 | DUF3396 domain-containing protein | - |
| J3B47_RS28270 (J3B47_28270) | 2407651..2407947 | + | 297 | WP_024431052.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J3B47_RS28275 (J3B47_28275) | 2407950..2408306 | + | 357 | WP_004202809.1 | putative addiction module antidote protein | Antitoxin Detail |
| J3B47_RS28280 (J3B47_28280) | 2408350..2409405 | - | 1056 | WP_207866379.1 | phage portal protein | - |
| J3B47_RS28285 (J3B47_28285) | 2409402..2411171 | - | 1770 | WP_207865891.1 | terminase ATPase subunit family protein | - |
| J3B47_RS28290 (J3B47_28290) | 2411315..2412124 | + | 810 | WP_004532870.1 | GPO family capsid scaffolding protein | - |
| J3B47_RS28295 (J3B47_28295) | 2412158..2413171 | + | 1014 | WP_004531048.1 | phage major capsid protein, P2 family | - |
| J3B47_RS28300 (J3B47_28300) | 2413168..2413857 | + | 690 | WP_053565565.1 | terminase endonuclease subunit | - |
| J3B47_RS28305 (J3B47_28305) | 2413957..2414436 | + | 480 | WP_004531050.1 | head completion/stabilization protein | - |
| J3B47_RS28310 (J3B47_28310) | 2414436..2414687 | + | 252 | WP_009971798.1 | hypothetical protein | - |
| J3B47_RS28315 (J3B47_28315) | 2414684..2414890 | + | 207 | WP_004524438.1 | tail protein X | - |
| J3B47_RS28320 (J3B47_28320) | 2414905..2415249 | + | 345 | WP_004524439.1 | putative holin | - |
| J3B47_RS28325 (J3B47_28325) | 2415251..2415523 | + | 273 | WP_004524440.1 | phage holin family protein | - |
| J3B47_RS28330 (J3B47_28330) | 2415520..2416332 | + | 813 | WP_009897048.1 | N-acetylmuramidase family protein | - |
| J3B47_RS28335 (J3B47_28335) | 2416329..2416685 | + | 357 | Protein_2022 | Rz-like lysis system protein LysB | - |
| J3B47_RS32300 | 2416606..2416881 | + | 276 | WP_237567164.1 | Rz1-like lysis system protein LysC | - |
| J3B47_RS28340 (J3B47_28340) | 2416874..2417290 | + | 417 | WP_161654462.1 | phage tail protein | - |
| J3B47_RS28345 (J3B47_28345) | 2417287..2417754 | + | 468 | WP_207866381.1 | phage virion morphogenesis protein | - |
| J3B47_RS28350 (J3B47_28350) | 2418154..2418912 | - | 759 | WP_207866383.1 | site-specific DNA-methyltransferase | - |
| J3B47_RS32305 | 2418931..2419167 | + | 237 | Protein_2027 | hypothetical protein | - |
| J3B47_RS28355 (J3B47_28355) | 2419086..2419766 | + | 681 | WP_009941342.1 | phage baseplate assembly protein V | - |
| J3B47_RS28360 (J3B47_28360) | 2419763..2420125 | + | 363 | WP_004531058.1 | GPW/gp25 family protein | - |
| J3B47_RS28365 (J3B47_28365) | 2420122..2421027 | + | 906 | WP_004531059.1 | baseplate assembly protein | - |
| J3B47_RS28370 (J3B47_28370) | 2421020..2421574 | + | 555 | WP_004531060.1 | phage tail protein I | - |
| J3B47_RS28375 (J3B47_28375) | 2421585..2423948 | + | 2364 | WP_057031070.1 | phage tail protein | - |
| J3B47_RS28380 (J3B47_28380) | 2423965..2424636 | + | 672 | WP_004531062.1 | phage tail fiber assembly protein | - |
| J3B47_RS28385 (J3B47_28385) | 2424692..2425864 | + | 1173 | WP_004531063.1 | phage tail sheath protein | - |
| J3B47_RS28390 (J3B47_28390) | 2425880..2426389 | + | 510 | WP_004524455.1 | phage major tail tube protein | - |
| J3B47_RS28395 (J3B47_28395) | 2426447..2426791 | + | 345 | WP_004531064.1 | phage tail assembly protein | - |
| J3B47_RS28400 (J3B47_28400) | 2426800..2426913 | + | 114 | WP_004552648.1 | GpE family phage tail protein | - |
| J3B47_RS28405 (J3B47_28405) | 2426916..2429876 | + | 2961 | WP_207866385.1 | hypothetical protein | - |
| J3B47_RS28410 (J3B47_28410) | 2429894..2430319 | + | 426 | WP_009935906.1 | phage tail protein | - |
| J3B47_RS28415 (J3B47_28415) | 2430319..2431419 | + | 1101 | WP_207866387.1 | phage late control D family protein | - |
| J3B47_RS28420 (J3B47_28420) | 2431430..2431966 | - | 537 | WP_172961430.1 | IS21 family transposase | - |
| J3B47_RS28425 (J3B47_28425) | 2432234..2433349 | - | 1116 | WP_004528294.1 | alanine dehydrogenase | - |
| J3B47_RS28430 (J3B47_28430) | 2434074..2434403 | - | 330 | WP_004524142.1 | H-NS histone family protein | - |
| J3B47_RS28435 (J3B47_28435) | 2434417..2434956 | - | 540 | WP_004528296.1 | ProQ/FinO family protein | - |
| J3B47_RS28440 (J3B47_28440) | 2435468..2436232 | + | 765 | WP_207866389.1 | fumarylacetoacetate hydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|