MGE detailed information
MGE type: Prophage MGE length: 21930 bp
Accession: NZ_CP071749 Location: 180960..202889 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Accession: NZ_CP071749 Location: 180960..202889 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3B47_RS00800 (J3B47_00800) | 176971..177330 | - | 360 | WP_004195883.1 | lipoprotein | - |
| J3B47_RS00805 (J3B47_00805) | 177502..178554 | - | 1053 | WP_004185221.1 | oxidoreductase | - |
| J3B47_RS00810 (J3B47_00810) | 179068..179802 | - | 735 | WP_004195885.1 | SGNH/GDSL hydrolase family protein | - |
| J3B47_RS00815 (J3B47_00815) | 179868..180662 | - | 795 | WP_004195887.1 | hypothetical protein | - |
| J3B47_RS00820 (J3B47_00820) | 180960..183047 | + | 2088 | WP_004524472.1 | UvrD-helicase domain-containing protein | - |
| J3B47_RS00825 (J3B47_00825) | 183368..184267 | - | 900 | WP_004202928.1 | c-type cytochrome | - |
| J3B47_RS00835 (J3B47_00835) | 185100..185318 | - | 219 | WP_080306295.1 | hypothetical protein | - |
| J3B47_RS00840 (J3B47_00840) | 185770..186069 | + | 300 | WP_038726526.1 | hypothetical protein | - |
| J3B47_RS00845 (J3B47_00845) | 186155..186364 | + | 210 | WP_011852350.1 | major capsid protein | - |
| J3B47_RS00850 (J3B47_00850) | 186431..186754 | + | 324 | WP_038726523.1 | hypothetical protein | - |
| J3B47_RS00855 (J3B47_00855) | 186834..188750 | + | 1917 | WP_243435408.1 | virulence factor TspB C-terminal domain-related protein | - |
| J3B47_RS00860 (J3B47_00860) | 188747..189028 | + | 282 | WP_011852347.1 | DUF2523 family protein | - |
| J3B47_RS00865 (J3B47_00865) | 189025..189951 | + | 927 | WP_011852346.1 | zonular occludens toxin domain-containing protein | - |
| J3B47_RS00870 (J3B47_00870) | 189948..191294 | + | 1347 | WP_038726519.1 | type II secretory pathway protein | - |
| J3B47_RS00875 (J3B47_00875) | 191308..191541 | - | 234 | WP_038726517.1 | hypothetical protein | - |
| J3B47_RS00880 (J3B47_00880) | 192056..192835 | + | 780 | WP_038799540.1 | hypothetical protein | - |
| J3B47_RS00885 (J3B47_00885) | 193121..193789 | + | 669 | WP_243435409.1 | IS91 family transposase ISTha3 | Transposase |
| J3B47_RS00890 (J3B47_00890) | 193830..194174 | + | 345 | WP_187328920.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J3B47_RS00895 (J3B47_00895) | 194212..194487 | + | 276 | WP_243435429.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| J3B47_RS31430 | 194667..194900 | + | 234 | WP_131201521.1 | hypothetical protein | - |
| J3B47_RS00900 (J3B47_00900) | 195390..195932 | + | 543 | WP_131201532.1 | PAAR domain-containing protein | - |
| J3B47_RS00905 (J3B47_00905) | 195929..196642 | + | 714 | WP_207865924.1 | VRR-NUC domain-containing protein | - |
| J3B47_RS00910 (J3B47_00910) | 196642..197721 | + | 1080 | WP_151271492.1 | DUF3396 domain-containing protein | - |
| J3B47_RS00915 (J3B47_00915) | 198189..198422 | + | 234 | WP_131201523.1 | hypothetical protein | - |
| J3B47_RS00920 (J3B47_00920) | 198597..199010 | + | 414 | WP_131201524.1 | very short patch repair endonuclease | - |
| J3B47_RS00925 (J3B47_00925) | 199015..200238 | + | 1224 | WP_059645399.1 | DNA cytosine methyltransferase | - |
| J3B47_RS00930 (J3B47_00930) | 200235..200897 | + | 663 | WP_082745138.1 | Eco29kI family restriction endonuclease | - |
| J3B47_RS00935 (J3B47_00935) | 201059..201223 | + | 165 | WP_175427564.1 | hypothetical protein | - |
| J3B47_RS00940 (J3B47_00940) | 201250..201636 | - | 387 | WP_151270804.1 | hypothetical protein | - |
| J3B47_RS31435 | 201604..202419 | + | 816 | WP_053566041.1 | Prophage integrase IntA ; Integrase | Integrase |
| J3B47_RS31440 | 202422..202889 | + | 468 | WP_235511683.1 | Prophage integrase IntS ; Integrase | Integrase |
| J3B47_RS00950 (J3B47_00950) | 202988..203362 | - | 375 | WP_137984719.1 | hypothetical protein | - |
| J3B47_RS00955 (J3B47_00955) | 204183..206378 | - | 2196 | WP_151270805.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|