MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104430 bp
Accession: NZ_CP071749 Location: 1481406..1585835 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Accession: NZ_CP071749 Location: 1481406..1585835 Organism: Burkholderia pseudomallei strain VBM21885 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3B47_RS06890 (J3B47_06890) | 1477137..1478108 | + | 972 | WP_004193249.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| J3B47_RS06895 (J3B47_06895) | 1478152..1479621 | + | 1470 | WP_038736859.1 | tRNA lysidine(34) synthetase TilS | - |
| J3B47_RS06900 (J3B47_06900) | 1479737..1479979 | - | 243 | WP_004192925.1 | hypothetical protein | - |
| J3B47_RS06905 (J3B47_06905) | 1479962..1481212 | + | 1251 | WP_004191166.1 | aspartate kinase | - |
| J3B47_RS06915 (J3B47_06915) | 1481775..1483493 | - | 1719 | WP_243435417.1 | ATP-binding protein | - |
| J3B47_RS06920 (J3B47_06920) | 1483666..1486404 | - | 2739 | WP_207866041.1 | DEAD/DEAH box helicase family protein | - |
| J3B47_RS06925 (J3B47_06925) | 1486404..1488092 | - | 1689 | WP_207866043.1 | site-specific DNA-methyltransferase | - |
| J3B47_RS06930 (J3B47_06930) | 1488107..1488796 | - | 690 | WP_243435418.1 | hypothetical protein | - |
| J3B47_RS06935 (J3B47_06935) | 1488789..1490435 | - | 1647 | WP_243435419.1 | AIPR family protein | - |
| J3B47_RS06940 (J3B47_06940) | 1490459..1493338 | - | 2880 | WP_207866047.1 | SNF2-related protein | - |
| J3B47_RS06945 (J3B47_06945) | 1493540..1495372 | - | 1833 | WP_207866049.1 | MobH family relaxase | - |
| J3B47_RS06950 (J3B47_06950) | 1495685..1497343 | + | 1659 | WP_207866051.1 | MASE1 domain-containing protein | - |
| J3B47_RS06955 (J3B47_06955) | 1497377..1497844 | - | 468 | WP_207866053.1 | hypothetical protein | - |
| J3B47_RS06960 (J3B47_06960) | 1498333..1498566 | + | 234 | WP_042583866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| J3B47_RS06965 (J3B47_06965) | 1498553..1498966 | + | 414 | WP_207866055.1 | PIN domain-containing protein | Toxin Detail |
| J3B47_RS06970 (J3B47_06970) | 1499000..1499368 | + | 369 | WP_207866057.1 | DUF3742 family protein | - |
| J3B47_RS06975 (J3B47_06975) | 1499378..1500883 | - | 1506 | WP_207866059.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| J3B47_RS06980 (J3B47_06980) | 1500897..1501238 | - | 342 | WP_207866061.1 | hypothetical protein | - |
| J3B47_RS06985 (J3B47_06985) | 1501241..1502656 | - | 1416 | WP_207866063.1 | integrating conjugative element protein | - |
| J3B47_RS06990 (J3B47_06990) | 1502665..1503606 | - | 942 | WP_207866065.1 | TIGR03756 family integrating conjugative element protein | - |
| J3B47_RS06995 (J3B47_06995) | 1503603..1503926 | - | 324 | WP_243435420.1 | TIGR03757 family integrating conjugative element protein | - |
| J3B47_RS07000 (J3B47_07000) | 1504243..1507557 | - | 3315 | WP_207866069.1 | NERD domain-containing protein | - |
| J3B47_RS07005 (J3B47_07005) | 1507554..1508342 | - | 789 | WP_207866071.1 | hypothetical protein | - |
| J3B47_RS07010 (J3B47_07010) | 1508435..1509364 | - | 930 | WP_207866073.1 | LysR substrate-binding domain-containing protein | - |
| J3B47_RS07015 (J3B47_07015) | 1509473..1510546 | + | 1074 | WP_207866075.1 | ABC transporter substrate-binding protein | - |
| J3B47_RS07020 (J3B47_07020) | 1510622..1511692 | + | 1071 | WP_207866077.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| J3B47_RS07025 (J3B47_07025) | 1511685..1512581 | + | 897 | WP_207866079.1 | Spermidine/putrescine transport system permease protein PotB | VF |
| J3B47_RS07030 (J3B47_07030) | 1512578..1513372 | + | 795 | WP_207866081.1 | ABC transporter permease | - |
| J3B47_RS07035 (J3B47_07035) | 1513369..1513671 | + | 303 | WP_207866083.1 | (2Fe-2S)-binding protein | - |
| J3B47_RS07040 (J3B47_07040) | 1513658..1515049 | + | 1392 | WP_207866085.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| J3B47_RS07045 (J3B47_07045) | 1515046..1516224 | + | 1179 | WP_207866087.1 | FAD-binding oxidoreductase | - |
| J3B47_RS07050 (J3B47_07050) | 1516365..1517558 | + | 1194 | WP_207866089.1 | porin | - |
| J3B47_RS07055 (J3B47_07055) | 1517598..1518716 | - | 1119 | WP_207866091.1 | saccharopine dehydrogenase NADP-binding domain-containing protein | - |
| J3B47_RS07060 (J3B47_07060) | 1519057..1520190 | + | 1134 | WP_243435421.1 | iron-containing redox enzyme family protein | - |
| J3B47_RS07065 (J3B47_07065) | 1520126..1520728 | + | 603 | WP_243435422.1 | TetR/AcrR family transcriptional regulator | - |
| J3B47_RS07070 (J3B47_07070) | 1520753..1521757 | - | 1005 | WP_243435423.1 | cytochrome c peroxidase | - |
| J3B47_RS31535 | 1521826..1522329 | - | 504 | WP_243435424.1 | hypothetical protein | - |
| J3B47_RS07080 (J3B47_07080) | 1522575..1528601 | + | 6027 | WP_207866093.1 | IPT/TIG domain-containing protein | - |
| J3B47_RS07085 (J3B47_07085) | 1528682..1533985 | + | 5304 | WP_243435425.1 | RHS repeat-associated core domain-containing protein | - |
| J3B47_RS07090 (J3B47_07090) | 1534004..1534306 | + | 303 | WP_207866095.1 | hypothetical protein | - |
| J3B47_RS07095 (J3B47_07095) | 1534860..1537100 | - | 2241 | WP_207866098.1 | Autotransporter adhesin UpaG | VF |
| J3B47_RS07100 (J3B47_07100) | 1537377..1537874 | - | 498 | WP_207866100.1 | JAB domain-containing protein | - |
| J3B47_RS07105 (J3B47_07105) | 1538076..1538822 | - | 747 | WP_207866102.1 | thioredoxin domain-containing protein | - |
| J3B47_RS07110 (J3B47_07110) | 1538819..1541707 | - | 2889 | WP_243435426.1 | conjugative transfer ATPase | - |
| J3B47_RS07115 (J3B47_07115) | 1541707..1542138 | - | 432 | WP_207866104.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| J3B47_RS07120 (J3B47_07120) | 1542119..1543582 | - | 1464 | WP_207866107.1 | TIGR03752 family integrating conjugative element protein | - |
| J3B47_RS07125 (J3B47_07125) | 1543572..1544402 | - | 831 | WP_243435431.1 | TIGR03749 family integrating conjugative element protein | - |
| J3B47_RS07130 (J3B47_07130) | 1544453..1545130 | - | 678 | WP_207866109.1 | TIGR03746 family integrating conjugative element protein | - |
| J3B47_RS07135 (J3B47_07135) | 1545127..1545549 | - | 423 | WP_207866110.1 | TIGR03750 family conjugal transfer protein | - |
| J3B47_RS07140 (J3B47_07140) | 1545557..1545925 | - | 369 | WP_207866112.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| J3B47_RS07145 (J3B47_07145) | 1545942..1546181 | - | 240 | WP_015602138.1 | TIGR03758 family integrating conjugative element protein | - |
| J3B47_RS07150 (J3B47_07150) | 1546178..1546525 | - | 348 | WP_207866114.1 | RAQPRD family integrative conjugative element protein | - |
| J3B47_RS07155 (J3B47_07155) | 1546812..1551491 | + | 4680 | WP_207866116.1 | ATP-binding protein | - |
| J3B47_RS07160 (J3B47_07160) | 1551832..1552347 | + | 516 | WP_207866117.1 | HNH endonuclease | - |
| J3B47_RS07165 (J3B47_07165) | 1552356..1553102 | - | 747 | WP_207866119.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| J3B47_RS07170 (J3B47_07170) | 1553122..1555281 | - | 2160 | WP_207866121.1 | type IV conjugative transfer system coupling protein TraD | - |
| J3B47_RS07175 (J3B47_07175) | 1555283..1555804 | - | 522 | WP_207866123.1 | integrating conjugative element protein | - |
| J3B47_RS07180 (J3B47_07180) | 1555818..1556309 | - | 492 | WP_243435432.1 | hypothetical protein | VF |
| J3B47_RS07185 (J3B47_07185) | 1556372..1557094 | - | 723 | WP_207866127.1 | TIGR03759 family integrating conjugative element protein | - |
| J3B47_RS07190 (J3B47_07190) | 1557103..1557678 | - | 576 | WP_207866129.1 | hypothetical protein | - |
| J3B47_RS07195 (J3B47_07195) | 1557732..1558328 | - | 597 | WP_207866131.1 | hypothetical protein | VF |
| J3B47_RS07200 (J3B47_07200) | 1558462..1558701 | - | 240 | WP_207866133.1 | carbon storage regulator CsrA | - |
| J3B47_RS07205 (J3B47_07205) | 1558933..1560606 | - | 1674 | WP_207866134.1 | hypothetical protein | - |
| J3B47_RS07210 (J3B47_07210) | 1560898..1563165 | - | 2268 | WP_207866136.1 | DEAD/DEAH box helicase | - |
| J3B47_RS07215 (J3B47_07215) | 1563251..1563544 | - | 294 | WP_207866138.1 | hypothetical protein | - |
| J3B47_RS07220 (J3B47_07220) | 1563640..1564749 | - | 1110 | WP_207866140.1 | DUF6094 domain-containing protein | - |
| J3B47_RS07225 (J3B47_07225) | 1564810..1565460 | - | 651 | WP_207866142.1 | hypothetical protein | - |
| J3B47_RS07230 (J3B47_07230) | 1565562..1566164 | - | 603 | WP_207866144.1 | DUF3275 family protein | - |
| J3B47_RS07235 (J3B47_07235) | 1566259..1566777 | - | 519 | WP_207866146.1 | STY4534 family ICE replication protein | - |
| J3B47_RS07240 (J3B47_07240) | 1567498..1567857 | - | 360 | WP_207866148.1 | DUF3085 domain-containing protein | - |
| J3B47_RS07245 (J3B47_07245) | 1567972..1568772 | - | 801 | WP_207866150.1 | GTPase | - |
| J3B47_RS07250 (J3B47_07250) | 1568893..1569606 | - | 714 | WP_207866152.1 | ABC transporter substrate-binding protein | - |
| J3B47_RS07255 (J3B47_07255) | 1569744..1570133 | - | 390 | WP_207866154.1 | hypothetical protein | - |
| J3B47_RS07260 (J3B47_07260) | 1570153..1570398 | - | 246 | WP_207866156.1 | hypothetical protein | - |
| J3B47_RS07265 (J3B47_07265) | 1570698..1572203 | - | 1506 | WP_207866158.1 | DNA cytosine methyltransferase | - |
| J3B47_RS07270 (J3B47_07270) | 1572634..1574664 | - | 2031 | WP_207866160.1 | DNA topoisomerase III | - |
| J3B47_RS07275 (J3B47_07275) | 1574746..1574937 | + | 192 | WP_207866162.1 | hypothetical protein | - |
| J3B47_RS07280 (J3B47_07280) | 1574949..1576724 | + | 1776 | WP_207866164.1 | hypothetical protein | - |
| J3B47_RS07285 (J3B47_07285) | 1576845..1577258 | - | 414 | WP_207866166.1 | single-stranded DNA-binding protein | - |
| J3B47_RS07290 (J3B47_07290) | 1577255..1577794 | - | 540 | WP_207866168.1 | DUF3158 family protein | - |
| J3B47_RS07295 (J3B47_07295) | 1577791..1578591 | - | 801 | WP_207866170.1 | TIGR03761 family integrating conjugative element protein | - |
| J3B47_RS07300 (J3B47_07300) | 1578892..1580052 | - | 1161 | WP_207866171.1 | STY4528 family pathogenicity island replication protein | - |
| J3B47_RS07305 (J3B47_07305) | 1580056..1580616 | - | 561 | WP_207866173.1 | DUF2857 domain-containing protein | - |
| J3B47_RS07310 (J3B47_07310) | 1580616..1582310 | - | 1695 | WP_207866175.1 | ParB family protein | - |
| J3B47_RS07315 (J3B47_07315) | 1582316..1583188 | - | 873 | WP_207866177.1 | Sporulation initiation inhibitor protein Soj | VF |
| J3B47_RS07320 (J3B47_07320) | 1583211..1583438 | - | 228 | WP_207866179.1 | AlpA family transcriptional regulator | - |
| J3B47_RS07325 (J3B47_07325) | 1584454..1585638 | - | 1185 | WP_207866181.1 | Prophage integrase IntA ; Integrase | Integrase |
| J3B47_RS07330 (J3B47_07330) | 1585794..1586111 | + | 318 | WP_207866277.1 | hypothetical protein | - |
| J3B47_RS07335 (J3B47_07335) | 1586395..1586883 | - | 489 | WP_162472523.1 | hypothetical protein | - |
| J3B47_RS07340 (J3B47_07340) | 1586873..1587919 | + | 1047 | WP_151271109.1 | acetyltransferase | - |
| J3B47_RS07345 (J3B47_07345) | 1588111..1589943 | + | 1833 | WP_004195901.1 | autotransporter BatA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|