MGE detailed information
MGE type: Mobilizable plasmid MGE length: 94094 bp
Accession: NZ_CP071714 Location: 1..94094 Organism: Escherichia coli strain EC20017429 Replicon: plasmid pL3
Accession: NZ_CP071714 Location: 1..94094 Organism: Escherichia coli strain EC20017429 Replicon: plasmid pL3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQM62_RS29480 (JQM62_29240) | 1..1032 | + | 1032 | WP_000907857.1 | plasmid replication initiator RepA | - |
| JQM62_RS29485 (JQM62_29245) | 1992..11488 | - | 9497 | Protein_1 | toxin B | - |
| JQM62_RS29490 (JQM62_29250) | 11602..11832 | - | 231 | WP_001443774.1 | IS1 family transposase | - |
| JQM62_RS29495 (JQM62_29255) | 11755..12247 | + | 493 | Protein_3 | IS3 family transposase | - |
| JQM62_RS29500 (JQM62_29260) | 12314..13763 | - | 1450 | Protein_4 | IS66 family transposase | - |
| JQM62_RS29505 (JQM62_29265) | 13826..14978 | - | 1153 | Protein_5 | IS3-like element IS911 family transposase | - |
| JQM62_RS29510 (JQM62_29270) | 14959..15435 | - | 477 | WP_000422675.1 | IS66 family transposase ISEc23 | Transposase |
| JQM62_RS29515 (JQM62_29275) | 15522..15636 | + | 115 | Protein_7 | IS3 family transposase | - |
| JQM62_RS29520 (JQM62_29280) | 15687..17196 | - | 1510 | Protein_8 | ISL3 family transposase | - |
| JQM62_RS29525 (JQM62_29285) | 17816..18823 | - | 1008 | Protein_9 | IS91 family transposase ISEc37 | Transposase |
| JQM62_RS29530 (JQM62_29290) | 19414..20601 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| JQM62_RS29535 (JQM62_29295) | 20601..20966 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| JQM62_RS29540 (JQM62_29300) | 21367..21756 | - | 390 | Protein_12 | IS91 family transposase ISMno23 | Transposase |
| JQM62_RS29545 (JQM62_29305) | 21790..23342 | - | 1553 | Protein_13 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29550 (JQM62_29310) | 23362..23709 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29555 (JQM62_29315) | 23706..24379 | - | 674 | Protein_15 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29560 (JQM62_29320) | 24576..25253 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JQM62_RS29565 (JQM62_29325) | 25253..25600 | + | 348 | WP_042854352.1 | IS66 family transposase ISCro1 | Transposase |
| JQM62_RS29570 (JQM62_29330) | 25620..27191 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| JQM62_RS29575 (JQM62_29335) | 27530..28507 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| JQM62_RS29580 (JQM62_29340) | 29313..30526 | + | 1214 | WP_169072758.1 | IS3 family transposase IS1203 | Transposase |
| JQM62_RS29585 (JQM62_29345) | 30699..32909 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| JQM62_RS29590 (JQM62_29350) | 32953..33342 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| JQM62_RS29595 (JQM62_29355) | 33456..33643 | + | 188 | Protein_23 | IS3 family transposase IS629 | Transposase |
| JQM62_RS29600 (JQM62_29360) | 33709..34865 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| JQM62_RS29605 (JQM62_29365) | 34911..35490 | + | 580 | Protein_25 | IS3 family transposase | - |
| JQM62_RS29610 (JQM62_29370) | 35570..35965 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| JQM62_RS29615 (JQM62_29375) | 35965..36924 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| JQM62_RS29620 (JQM62_29380) | 37197..38099 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| JQM62_RS29625 (JQM62_29385) | 38096..38407 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| JQM62_RS29630 (JQM62_29390) | 38483..39166 | + | 684 | WP_032324142.1 | DNA methylase | - |
| JQM62_RS29635 (JQM62_29395) | 39166..39384 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| JQM62_RS29640 (JQM62_29400) | 39344..39830 | + | 487 | Protein_32 | DUF1380 family protein | - |
| JQM62_RS29645 (JQM62_29405) | 39875..40114 | + | 240 | Protein_33 | hypothetical protein | - |
| JQM62_RS29650 (JQM62_29410) | 40109..40357 | + | 249 | Protein_34 | conjugation system SOS inhibitor PsiB | - |
| JQM62_RS29655 (JQM62_29415) | 40354..41073 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| JQM62_RS29660 (JQM62_29420) | 41070..41667 | + | 598 | Protein_36 | hypothetical protein | - |
| JQM62_RS29665 (JQM62_29425) | 42130..42630 | + | 501 | WP_044788412.1 | antirestriction protein ArdA | - |
| JQM62_RS29670 (JQM62_29430) | 42632..43252 | - | 621 | WP_162137195.1 | hypothetical protein | - |
| JQM62_RS29675 | 43358..43791 | + | 434 | Protein_39 | post-segregation killing protein PndC | - |
| JQM62_RS29680 (JQM62_29440) | 43884..44150 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| JQM62_RS29685 (JQM62_29445) | 44215..45105 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| JQM62_RS29690 (JQM62_29450) | 45105..45350 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| JQM62_RS29695 (JQM62_29455) | 45381..45632 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| JQM62_RS29700 (JQM62_29460) | 45691..45966 | - | 276 | WP_001431784.1 | hypothetical protein | - |
| JQM62_RS29705 (JQM62_29465) | 46211..47059 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| JQM62_RS29710 (JQM62_29470) | 47145..47480 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JQM62_RS29715 (JQM62_29475) | 47712..48044 | + | 333 | WP_001291056.1 | plasmid mobilization protein MobA | - |
| JQM62_RS29720 (JQM62_29480) | 48056..50775 | + | 2720 | Protein_48 | relaxase/mobilization nuclease domain-containing protein | - |
| JQM62_RS29725 (JQM62_29485) | 50996..51289 | - | 294 | Protein_49 | conjugal transfer protein TrbC | - |
| JQM62_RS29730 (JQM62_29490) | 51355..52042 | + | 688 | Protein_50 | IS3 family transposase IS600 | Transposase |
| JQM62_RS29735 (JQM62_29495) | 52083..53304 | - | 1222 | Protein_51 | IS3 family transposase IS629 | Transposase |
| JQM62_RS29740 | 53450..53716 | + | 267 | Protein_52 | DUF1449 family protein | - |
| JQM62_RS29745 (JQM62_29505) | 53764..53976 | - | 213 | Protein_53 | IS3 family transposase ISSfl10 | Transposase |
| JQM62_RS29750 (JQM62_29510) | 54015..54272 | + | 258 | WP_000112000.1 | hypothetical protein | - |
| JQM62_RS29755 (JQM62_29515) | 54520..58422 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| JQM62_RS29760 (JQM62_29520) | 58865..59038 | - | 174 | Protein_56 | IS66 family transposase | - |
| JQM62_RS29765 (JQM62_29525) | 59100..59312 | + | 213 | Protein_57 | IS3 family transposase ISSfl10 | Transposase |
| JQM62_RS29770 | 59360..59626 | - | 267 | Protein_58 | DUF1449 family protein | - |
| JQM62_RS29775 (JQM62_29535) | 59710..60384 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29780 (JQM62_29540) | 60381..60728 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29785 (JQM62_29545) | 60748..62299 | + | 1552 | Protein_61 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29790 (JQM62_29550) | 62578..63765 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| JQM62_RS29795 (JQM62_29555) | 63716..64129 | - | 414 | WP_001344870.1 | hypothetical protein | - |
| JQM62_RS29800 (JQM62_29560) | 64366..64713 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| JQM62_RS29805 (JQM62_29565) | 64763..66297 | + | 1535 | Protein_65 | IS66 family transposase ISEc8 | Transposase |
| JQM62_RS29810 (JQM62_29570) | 66360..66548 | - | 189 | Protein_66 | hypothetical protein | - |
| JQM62_RS29815 (JQM62_29575) | 66601..67599 | - | 999 | WP_012680945.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JQM62_RS29820 (JQM62_29580) | 67673..69394 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| JQM62_RS29825 (JQM62_29585) | 69488..70594 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| JQM62_RS29830 (JQM62_29590) | 70594..71415 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| JQM62_RS29835 (JQM62_29595) | 72888..73540 | + | 653 | Protein_71 | IS3 family transposase IS629 | Transposase |
| JQM62_RS29840 (JQM62_29600) | 74063..74577 | + | 515 | Protein_72 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| JQM62_RS29845 (JQM62_29605) | 74579..77575 | + | 2997 | WP_000217745.1 | Hemolysin, chromosomal | VF |
| JQM62_RS29850 (JQM62_29610) | 77625..79745 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| JQM62_RS29855 (JQM62_29615) | 79749..81188 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| JQM62_RS29860 (JQM62_29620) | 81255..81398 | + | 144 | Protein_76 | transcriptional regulator | - |
| JQM62_RS29865 (JQM62_29625) | 81402..81593 | + | 192 | Protein_77 | lipid II-degrading bacteriocin | - |
| JQM62_RS29870 (JQM62_29630) | 81601..81954 | - | 354 | WP_000864810.1 | colicin M immunity protein | - |
| JQM62_RS29875 (JQM62_29635) | 82127..82909 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| JQM62_RS29880 (JQM62_29640) | 82911..83324 | - | 414 | WP_000465041.1 | hypothetical protein | - |
| JQM62_RS29885 (JQM62_29645) | 83884..84114 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| JQM62_RS29890 (JQM62_29650) | 84111..84527 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JQM62_RS29895 (JQM62_29655) | 84689..85234 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| JQM62_RS29900 (JQM62_29660) | 85302..86458 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| JQM62_RS29905 (JQM62_29665) | 87263..88123 | - | 861 | WP_000704534.1 | putative protein YcjY | VF |
| JQM62_RS29910 (JQM62_29670) | 88251..88607 | + | 357 | Protein_86 | tyrosine-type recombinase/integrase | - |
| JQM62_RS29915 (JQM62_29675) | 88691..89365 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29920 (JQM62_29680) | 89362..89709 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29925 (JQM62_29685) | 89729..91280 | + | 1552 | Protein_89 | IS66 family transposase ISSfl3 | Transposase |
| JQM62_RS29930 (JQM62_29690) | 91284..91673 | - | 390 | WP_000176505.1 | DUF1449 family protein | - |
| JQM62_RS29935 (JQM62_29695) | 91939..92604 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| JQM62_RS29940 (JQM62_29700) | 92745..93386 | - | 642 | WP_077792700.1 | transcription termination factor NusG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|