MGE detailed information
MGE type: Prophage MGE length: 65598 bp
Accession: NZ_CP071686 Location: 2649656..2715253 Organism: Salmonella sp. SAL-007 Replicon: chromosome
Accession: NZ_CP071686 Location: 2649656..2715253 Organism: Salmonella sp. SAL-007 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G46_RS12870 () | 2644926..2646974 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| J1G46_RS12875 () | 2646994..2647680 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| J1G46_RS12880 () | 2647778..2648275 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| J1G46_RS12885 () | 2648404..2649687 | + | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| J1G46_RS12890 () | 2649656..2652289 | + | 2634 | WP_001529852.1 | hypothetical protein | VF |
| J1G46_RS12895 () | 2652367..2653806 | + | 1440 | WP_001531515.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| J1G46_RS12900 () | 2653924..2654160 | + | 237 | WP_024131108.1 | DUF1480 family protein | - |
| J1G46_RS12905 () | 2654271..2654462 | + | 192 | WP_000457838.1 | YebW family protein | - |
| J1G46_RS12910 () | 2654481..2655131 | - | 651 | WP_000986173.1 | protein-serine/threonine phosphatase | - |
| J1G46_RS12915 () | 2655355..2655519 | - | 165 | WP_001134856.1 | membrane protein | - |
| J1G46_RS12920 () | 2655804..2656526 | - | 723 | WP_000182071.1 | Guanine nucleotide exchange factor sopE2 | VF |
| J1G46_RS12925 () | 2657210..2657605 | + | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| J1G46_RS12930 () | 2657935..2658411 | + | 477 | WP_000030934.1 | hypothetical protein | - |
| J1G46_RS12935 () | 2658784..2659203 | - | 420 | WP_001025515.1 | GNAT family N-acetyltransferase | - |
| J1G46_RS12940 () | 2659576..2659845 | + | 270 | WP_001576019.1 | hypothetical protein | - |
| J1G46_RS12945 () | 2660011..2660151 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| J1G46_RS12950 () | 2660297..2661504 | - | 1208 | Protein_2533 | IS256 family transposase ISEc39 | Transposase |
| J1G46_RS12955 () | 2661574..2662040 | + | 467 | Protein_2534 | tyrosine-type recombinase/integrase | - |
| J1G46_RS12960 () | 2663290..2664204 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| J1G46_RS12965 () | 2664337..2664495 | + | 159 | WP_000480735.1 | hypothetical protein | - |
| J1G46_RS12970 () | 2664505..2665119 | + | 615 | WP_000848072.1 | disulfide bond formation protein B | - |
| J1G46_RS12975 () | 2665446..2665592 | - | 147 | Protein_2538 | helix-turn-helix domain-containing protein | - |
| J1G46_RS12980 () | 2665607..2665753 | + | 147 | WP_000951652.1 | hypothetical protein | - |
| J1G46_RS12985 () | 2666254..2666379 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| J1G46_RS12990 () | 2666949..2667149 | + | 201 | WP_012543349.1 | phage virulence factor PagK family protein | - |
| J1G46_RS12995 () | 2667246..2668126 | - | 881 | Protein_2542 | tail fiber assembly protein | - |
| J1G46_RS13000 () | 2668313..2669298 | - | 986 | Protein_2543 | tail fiber protein | - |
| J1G46_RS13005 () | 2669297..2669864 | - | 568 | Protein_2544 | phage terminase large subunit family protein | - |
| J1G46_RS13010 () | 2669851..2670342 | - | 492 | WP_000348541.1 | DUF1441 family protein | - |
| J1G46_RS13015 () | 2670397..2670585 | + | 189 | WP_001576014.1 | hypothetical protein | - |
| J1G46_RS13020 () | 2670650..2670817 | + | 168 | WP_000789530.1 | lytic enzyme | - |
| J1G46_RS13025 () | 2671074..2671607 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| J1G46_RS13030 () | 2671661..2671852 | - | 192 | Protein_2549 | glycoside hydrolase family 19 protein | - |
| J1G46_RS13035 () | 2671841..2672566 | + | 726 | Protein_2550 | exonuclease VIII | - |
| J1G46_RS13040 () | 2672566..2673488 | + | 923 | Protein_2551 | hypothetical protein ; Integrase | Integrase |
| J1G46_RS13045 () | 2674433..2675233 | + | 801 | WP_001536069.1 | hypothetical protein | - |
| J1G46_RS13050 () | 2675262..2675503 | - | 242 | Protein_2553 | helix-turn-helix domain-containing protein | - |
| J1G46_RS13055 () | 2675713..2676435 | + | 723 | WP_000161704.1 | hypothetical protein | VF |
| J1G46_RS13060 () | 2676637..2676981 | - | 345 | Protein_2555 | tail fiber assembly protein | - |
| J1G46_RS13065 () | 2676986..2677849 | - | 864 | WP_072100756.1 | DUF1983 domain-containing protein | - |
| J1G46_RS13070 () | 2677845..2680220 | - | 2376 | Protein_2557 | host specificity protein J | - |
| J1G46_RS13075 () | 2680220..2680480 | - | 261 | Protein_2558 | Mov34/MPN/PAD-1 family protein | - |
| J1G46_RS13080 () | 2680490..2681185 | - | 696 | WP_001152416.1 | phage minor tail protein L | - |
| J1G46_RS13085 () | 2681275..2681808 | + | 534 | WP_000877926.1 | hypothetical protein | VF |
| J1G46_RS13090 () | 2681925..2682185 | - | 261 | Protein_2561 | porin family protein | - |
| J1G46_RS13095 () | 2682184..2682495 | - | 312 | Protein_2562 | DUF1441 family protein | - |
| J1G46_RS13100 () | 2682703..2683182 | - | 480 | WP_001541990.1 | lysis protein | - |
| J1G46_RS13105 () | 2683200..2683652 | - | 453 | WP_000984586.1 | lysozyme | - |
| J1G46_RS13110 () | 2683636..2683965 | - | 330 | WP_001574216.1 | phage holin, lambda family | - |
| J1G46_RS13115 () | 2684241..2684927 | + | 687 | WP_001574215.1 | PipA/GogA/GtgA family type III secretion system effector | - |
| J1G46_RS13120 () | 2685288..2685737 | + | 450 | WP_000798708.1 | hypothetical protein | - |
| J1G46_RS13125 () | 2686111..2686635 | - | 525 | WP_001574213.1 | hypothetical protein | - |
| J1G46_RS13130 () | 2686732..2687421 | - | 690 | WP_001097218.1 | antitermination protein | - |
| J1G46_RS13135 () | 2687418..2687554 | - | 137 | Protein_2570 | YlcG family protein | - |
| J1G46_RS13140 () | 2687551..2687778 | - | 228 | WP_000784710.1 | recombination protein NinG | - |
| J1G46_RS13145 () | 2687775..2688374 | - | 600 | WP_000940753.1 | DUF1367 family protein | - |
| J1G46_RS13150 () | 2688438..2688686 | - | 249 | WP_000911593.1 | hypothetical protein | - |
| J1G46_RS13155 () | 2688958..2689110 | - | 153 | WP_000248679.1 | hypothetical protein | - |
| J1G46_RS13160 () | 2689375..2691354 | - | 1980 | WP_001237395.1 | MBL fold metallo-hydrolase | - |
| J1G46_RS13165 () | 2691768..2692046 | + | 279 | WP_001575998.1 | excisionase | - |
| J1G46_RS13170 () | 2692021..2693100 | + | 1080 | WP_000087636.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2693238..2693383 | + | 146 | - | - | Antitoxin Detail |
| - () | 2693240..2693343 | - | 104 | - | - | Toxin Detail |
| J1G46_RS13175 () | 2693483..2693836 | - | 354 | WP_000722370.1 | YebY family protein | - |
| J1G46_RS13180 () | 2693853..2694728 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| J1G46_RS13185 () | 2694729..2695103 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| J1G46_RS13190 () | 2695241..2695471 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| J1G46_RS13195 () | 2695579..2696235 | + | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| J1G46_RS13200 () | 2696259..2696957 | + | 699 | WP_000944288.1 | exodeoxyribonuclease X | - |
| J1G46_RS13205 () | 2696994..2699045 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| J1G46_RS13210 () | 2699258..2699917 | - | 660 | WP_000024715.1 | tellurite resistance TerB family protein | - |
| J1G46_RS13215 () | 2700011..2700364 | - | 354 | WP_001042123.1 | hypothetical protein | - |
| J1G46_RS13220 () | 2700432..2700722 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| J1G46_RS13225 () | 2700853..2702031 | + | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| J1G46_RS13230 () | 2702131..2702772 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| J1G46_RS13235 () | 2702810..2704621 | - | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| J1G46_RS13240 () | 2704856..2706331 | - | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| J1G46_RS13245 () | 2706673..2707542 | + | 870 | WP_001056720.1 | MurR/RpiR family transcriptional regulator | - |
| J1G46_RS13250 () | 2707666..2709108 | + | 1443 | WP_000091156.1 | pyruvate kinase | - |
| J1G46_RS13255 () | 2709181..2710152 | - | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| J1G46_RS13260 () | 2710269..2711588 | - | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| J1G46_RS13265 () | 2711604..2712548 | - | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| J1G46_RS13270 () | 2712627..2713382 | + | 756 | WP_000203023.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| J1G46_RS13275 () | 2713379..2714164 | + | 786 | WP_000571508.1 | hypothetical protein | VF |
| J1G46_RS13280 () | 2714243..2715253 | - | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| J1G46_RS13285 () | 2715262..2715873 | - | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| J1G46_RS13290 () | 2716233..2716925 | - | 693 | WP_001680382.1 | hypothetical protein | - |
| J1G46_RS13295 () | 2717134..2717733 | + | 600 | WP_000716756.1 | YebB family permuted papain-like enzyme | - |
| J1G46_RS13300 () | 2717735..2718256 | - | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| J1G46_RS13305 () | 2718293..2719033 | - | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| J1G46_RS13310 () | 2719063..2719515 | - | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|