MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP071522 Location: 3882477..3902831 Organism: Escherichia coli strain UPEC129 Replicon: chromosome
Accession: NZ_CP071522 Location: 3882477..3902831 Organism: Escherichia coli strain UPEC129 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J3P56_RS19050 () | 3877842..3878300 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| J3P56_RS19055 () | 3878561..3880018 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| J3P56_RS19060 () | 3880075..3880689 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| J3P56_RS19065 () | 3880686..3881825 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| J3P56_RS19070 () | 3882015..3882467 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| J3P56_RS19075 () | 3882477..3882875 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| J3P56_RS19080 () | 3882878..3883171 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| J3P56_RS19085 () | 3883223..3884278 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| J3P56_RS19090 () | 3884349..3885134 | - | 786 | WP_000207544.1 | Chemotaxis protein LafU | VF |
| J3P56_RS19095 () | 3885106..3886818 | + | 1713 | Protein_3737 | Flagellar biosynthesis protein FlhA | VF |
| J3P56_RS19100 () | 3886897..3887055 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| J3P56_RS19105 () | 3887138..3887635 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| J3P56_RS19110 () | 3887811..3888560 | - | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| J3P56_RS19115 () | 3888872..3889612 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| J3P56_RS19120 () | 3889583..3890350 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| J3P56_RS19125 () | 3890555..3891133 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| J3P56_RS19130 () | 3891373..3893817 | + | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| J3P56_RS19135 () | 3893860..3894306 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| J3P56_RS19140 () | 3894487..3895257 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| J3P56_RS19145 () | 3895308..3895502 | - | 195 | Protein_3747 | transposase | - |
| J3P56_RS19150 () | 3895528..3896016 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| J3P56_RS19155 () | 3896110..3896613 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| J3P56_RS19160 () | 3896842..3897606 | - | 765 | Protein_3750 | ISAs1 family transposase ISEc1 | Transposase |
| J3P56_RS19165 () | 3897864..3898154 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| J3P56_RS19170 () | 3898129..3899568 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| J3P56_RS19175 () | 3899561..3900607 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| J3P56_RS19180 () | 3900714..3902696 | - | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| J3P56_RS19185 () | 3902917..3903435 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| J3P56_RS19190 () | 3904141..3904644 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| J3P56_RS19195 () | 3904667..3906151 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| J3P56_RS19200 () | 3906156..3906581 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|