MGE detailed information
MGE type: Prophage MGE length: 74620 bp
Accession: NZ_CP071521 Location: 1054296..1128915 Organism: Escherichia coli strain 11202 Replicon: chromosome
Accession: NZ_CP071521 Location: 1054296..1128915 Organism: Escherichia coli strain 11202 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J2D70_RS05025 (1050029) | 1050029..1051162 | - | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
| J2D70_RS05030 (1051159) | 1051159..1052598 | - | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| J2D70_RS05035 (1052785) | 1052785..1054299 | + | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| J2D70_RS05040 (1054296) | 1054296..1055261 | - | 966 | WP_001287420.1 | hypothetical protein | VF |
| J2D70_RS05045 (1055254) | 1055254..1056027 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| J2D70_RS05050 (1056094) | 1056094..1056453 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| J2D70_RS05055 (1056558) | 1056558..1057337 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| J2D70_RS05060 (1057341) | 1057341..1057712 | - | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| J2D70_RS05065 (1057723) | 1057723..1058682 | - | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| J2D70_RS05070 (1058679) | 1058679..1059242 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| J2D70_RS05075 (1059498) | 1059498..1060583 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| J2D70_RS05080 (1060728) | 1060728..1061225 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| J2D70_RS05085 (1061305) | 1061305..1062366 | + | 1062 | WP_000963143.1 | recombinase RecA | - |
| J2D70_RS05090 (1062435) | 1062435..1062935 | + | 501 | WP_000140508.1 | recombination regulator RecX | - |
| J2D70_RS05095 (1063063) | 1063063..1065693 | + | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| J2D70_RS05100 (1065928) | 1065928..1066113 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| J2D70_RS05130 (1067571) | 1067571..1068137 | + | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| J2D70_RS05135 (1068134) | 1068134..1068562 | + | 429 | WP_001287454.1 | YqaA family protein | - |
| J2D70_RS05140 (1068635) | 1068635..1070191 | + | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| J2D70_RS05145 (1070341) | 1070341..1070856 | + | 516 | WP_001130211.1 | hypothetical protein | VF |
| J2D70_RS05150 (1070920) | 1070920..1072458 | - | 1539 | WP_001295176.1 | hypothetical protein | VF |
| J2D70_RS05155 (1072475) | 1072475..1073647 | - | 1173 | WP_001326681.1 | hypothetical protein | VF |
| J2D70_RS05160 (1073774) | 1073774..1074304 | - | 531 | WP_000378442.1 | hypothetical protein | VF |
| J2D70_RS05165 (1074395) | 1074395..1074730 | - | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| J2D70_RS05170 (1074720) | 1074720..1075457 | - | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| J2D70_RS05175 (1075581) | 1075581..1076758 | - | 1178 | Protein_1018 | MFS transporter | - |
| J2D70_RS05180 (1076950) | 1076950..1077942 | - | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| J2D70_RS05185 (1078000) | 1078000..1079064 | - | 1065 | WP_000774988.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| J2D70_RS05190 (1079057) | 1079057..1080259 | - | 1203 | WP_000985494.1 | hypothetical protein | VF |
| J2D70_RS05195 (1080613) | 1080613..1081572 | - | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| J2D70_RS05200 (1081582) | 1081582..1083726 | - | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| J2D70_RS05205 (1083699) | 1083699..1084109 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| J2D70_RS05210 (1084106) | 1084106..1084351 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| J2D70_RS05215 (1084599) | 1084599..1084928 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| J2D70_RS05220 (1085080) | 1085080..1085424 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| J2D70_RS05225 (1085461) | 1085461..1085910 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| J2D70_RS05230 (1086579) | 1086579..1086983 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| J2D70_RS05235 (1087030) | 1087030..1087554 | - | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| J2D70_RS05240 (1087564) | 1087564..1087863 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| J2D70_RS05245 (1088046) | 1088046..1088204 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| J2D70_RS05250 (1088288) | 1088288..1088737 | + | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| J2D70_RS05255 (1088738) | 1088738..1089400 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| J2D70_RS05260 (1089421) | 1089421..1090821 | - | 1401 | WP_001295173.1 | GABA permease | - |
| J2D70_RS05265 (1091059) | 1091059..1092339 | - | 1281 | WP_001087611.1 | hypothetical protein | VF |
| J2D70_RS05270 (1092353) | 1092353..1093801 | - | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| J2D70_RS05275 (1093824) | 1093824..1095092 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| J2D70_RS05280 (1095112) | 1095112..1096089 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| J2D70_RS05285 (1096425) | 1096425..1098677 | - | 2253 | Protein_1040 | alpha-amylase family glycosyl hydrolase | - |
| J2D70_RS05295 (1100063) | 1100063..1101436 | + | 1374 | Protein_1041 | DUF5507 domain-containing protein | - |
| J2D70_RS22975 (1101830) | 1101830..1102009 | + | 180 | WP_087676347.1 | DNA invertase | - |
| J2D70_RS05305 (1102164) | 1102164..1102283 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| J2D70_RS05310 (1102348) | 1102348..1106928 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| J2D70_RS05315 (1107292) | 1107292..1107621 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| J2D70_RS05320 (1107642) | 1107642..1107959 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| J2D70_RS05325 (1107997) | 1107997..1108197 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| J2D70_RS05330 (1108206) | 1108206..1108688 | - | 483 | WP_001407480.1 | RadC family protein | - |
| J2D70_RS05335 (1108697) | 1108697..1109155 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| J2D70_RS05340 (1109258) | 1109258..1109442 | - | 185 | Protein_1050 | DUF905 family protein | - |
| J2D70_RS05345 (1110053) | 1110053..1111756 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| J2D70_RS05350 (1111898) | 1111898..1112907 | + | 1010 | Protein_1052 | arsenic transporter | - |
| J2D70_RS22815 (1112920) | 1112920..1113072 | + | 153 | Protein_1053 | arsenate reductase | - |
| J2D70_RS05360 (1113459) | 1113459..1113926 | - | 468 | WP_000702495.1 | protein YfjT | - |
| J2D70_RS05365 (1113950) | 1113950..1114393 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| J2D70_RS05370 (1114393) | 1114393..1114629 | - | 237 | WP_001144029.1 | protein YpjK | - |
| J2D70_RS05375 (1114670) | 1114670..1115371 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| J2D70_RS05380 (1115588) | 1115588..1116409 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| J2D70_RS05385 (1116501) | 1116501..1117364 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| J2D70_RS05390 (1117719) | 1117719..1118090 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| J2D70_RS05395 (1118083) | 1118083..1119156 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| J2D70_RS05400 (1119298) | 1119298..1119561 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| J2D70_RS05405 (1119921) | 1119921..1121537 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| J2D70_RS05410 (1121534) | 1121534..1123723 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| J2D70_RS05415 (1123901) | 1123901..1124527 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| J2D70_RS05420 (1124680) | 1124680..1126089 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| J2D70_RS05425 (1126218) | 1126218..1126430 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| J2D70_RS05430 (1126474) | 1126474..1127430 | + | 957 | WP_000510827.1 | protein YfjH | - |
| J2D70_RS05435 (1127674) | 1127674..1128915 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| J2D70_RS05445 (1129696) | 1129696..1130178 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| J2D70_RS05450 (1130349) | 1130349..1130786 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| J2D70_RS05455 (1130776) | 1130776..1131066 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| J2D70_RS05460 (1131128) | 1131128..1131469 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| J2D70_RS05465 (1131618) | 1131618..1133279 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|