MGE detailed information
MGE type: Prophage MGE length: 67809 bp
Accession: NZ_CP071491 Location: 466269..534077 Organism: Glaesserella parasuis strain GHP1807 Replicon: chromosome
Accession: NZ_CP071491 Location: 466269..534077 Organism: Glaesserella parasuis strain GHP1807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G54_RS02540 () | 462050..462877 | + | 828 | WP_021117792.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| J1G54_RS02545 () | 462972..463960 | - | 989 | Protein_486 | 2-hydroxyacid dehydrogenase | - |
| J1G54_RS02550 () | 463983..465092 | - | 1110 | WP_021112005.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| J1G54_RS02555 () | 465094..466134 | - | 1041 | WP_160436556.1 | DUF4115 domain-containing protein | - |
| J1G54_RS02560 () | 466269..468137 | - | 1869 | WP_160413876.1 | signal peptide peptidase SppA | - |
| J1G54_RS02565 () | 468355..470136 | + | 1782 | WP_207342812.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| J1G54_RS02570 () | 470276..470959 | + | 684 | WP_021113230.1 | nicotinamide riboside transporter PnuC | - |
| J1G54_RS02575 () | 471051..471761 | + | 711 | WP_021113223.1 | DnaA regulatory inactivator Hda | - |
| J1G54_RS02580 () | 471762..472388 | + | 627 | WP_075630842.1 | Cytochrome c biogenesis ATP-binding export protein CcmA | VF |
| J1G54_RS02585 () | 472398..473060 | + | 663 | WP_021113229.1 | Heme exporter protein B | VF |
| J1G54_RS02590 () | 473107..473847 | + | 741 | WP_005710391.1 | Heme exporter protein C | VF |
| J1G54_RS02595 () | 473856..474050 | + | 195 | WP_010786065.1 | heme exporter protein CcmD | - |
| J1G54_RS02600 () | 474216..475604 | + | 1389 | WP_075605070.1 | DASS family sodium-coupled anion symporter | - |
| J1G54_RS02605 () | 475843..477018 | + | 1176 | WP_071610786.1 | phosphoglycerate kinase | - |
| J1G54_RS02610 () | 477123..478202 | + | 1080 | WP_005710395.1 | class II fructose-bisphosphate aldolase | - |
| J1G54_RS02615 () | 478375..479175 | + | 801 | WP_005710396.1 | ABC transporter ATP-binding protein | - |
| J1G54_RS02620 () | 479188..479826 | + | 639 | WP_203399170.1 | nitroreductase family protein | - |
| J1G54_RS02625 () | 480179..481387 | - | 1209 | WP_203399019.1 | IS256 family transposase IS1414 | Transposase |
| J1G54_RS02630 () | 481418..481813 | - | 396 | WP_203399018.1 | transcriptional regulator | - |
| J1G54_RS02635 () | 481810..482214 | - | 405 | WP_075630617.1 | regulatory protein GemA | - |
| J1G54_RS02640 () | 482204..482566 | - | 363 | WP_203399017.1 | hypothetical protein | - |
| J1G54_RS02645 () | 482548..483024 | - | 477 | WP_207342813.1 | hypothetical protein | - |
| J1G54_RS02650 () | 483074..483487 | - | 414 | WP_203399015.1 | hypothetical protein | - |
| J1G54_RS02655 () | 483484..483642 | - | 159 | WP_164681663.1 | hypothetical protein | - |
| J1G54_RS02660 () | 483635..483850 | - | 216 | WP_035522948.1 | ANR family transcriptional regulator | - |
| J1G54_RS02665 () | 483847..484371 | - | 525 | WP_075630614.1 | host-nuclease inhibitor Gam family protein | - |
| J1G54_RS02670 () | 484461..485633 | - | 1173 | WP_207342814.1 | AAA family ATPase | - |
| J1G54_RS02675 () | 485658..487478 | - | 1821 | WP_207342815.1 | hypothetical protein ; Integrase | Integrase |
| J1G54_RS02680 () | 487488..488417 | - | 930 | WP_203399014.1 | hypothetical protein | - |
| J1G54_RS02685 () | 488446..488748 | - | 303 | WP_012621964.1 | IclR family transcriptional regulator | - |
| J1G54_RS02690 () | 488745..488888 | - | 144 | WP_164692070.1 | hypothetical protein | - |
| J1G54_RS02695 () | 488945..489262 | + | 318 | WP_203399013.1 | hypothetical protein | - |
| J1G54_RS02700 () | 489497..489730 | - | 234 | WP_203399012.1 | DNA-binding protein | - |
| J1G54_RS02705 () | 489795..490028 | + | 234 | WP_203399011.1 | hypothetical protein | - |
| J1G54_RS02710 () | 490192..490548 | + | 357 | WP_203399010.1 | helix-turn-helix transcriptional regulator | - |
| J1G54_RS02715 () | 490582..490980 | + | 399 | WP_203399009.1 | hypothetical protein | - |
| J1G54_RS02720 () | 491089..491295 | + | 207 | WP_203399008.1 | excalibur calcium-binding domain-containing protein | - |
| J1G54_RS02725 () | 491292..491816 | + | 525 | WP_203399346.1 | hypothetical protein | - |
| J1G54_RS02730 () | 491923..492444 | + | 522 | WP_035522975.1 | glycoside hydrolase family 108 protein | - |
| J1G54_RS02735 () | 492545..492778 | + | 234 | WP_012621973.1 | DUF2644 domain-containing protein | - |
| J1G54_RS02740 () | 492775..493128 | + | 354 | WP_012621974.1 | DUF2681 domain-containing protein | - |
| J1G54_RS02745 () | 493153..493482 | + | 330 | WP_012621975.1 | DUF2730 domain-containing protein | - |
| J1G54_RS02750 () | 493486..493776 | + | 291 | WP_012621976.1 | hypothetical protein | - |
| J1G54_RS02755 () | 493810..494382 | + | 573 | WP_012621977.1 | DUF3486 family protein | - |
| J1G54_RS02760 () | 494369..495679 | + | 1311 | WP_035498340.1 | terminase family protein | - |
| J1G54_RS02765 () | 495683..497101 | + | 1419 | WP_203399007.1 | DUF935 family protein | - |
| J1G54_RS02770 () | 497098..498366 | + | 1269 | WP_021110031.1 | phage Mu F like family protein | - |
| J1G54_RS02775 () | 498493..498948 | + | 456 | WP_035522981.1 | phage virion morphogenesis protein | - |
| J1G54_RS02780 () | 499169..500278 | + | 1110 | WP_203399006.1 | peptidase | - |
| J1G54_RS02785 () | 500288..501220 | + | 933 | WP_203399005.1 | inorganic pyrophosphatase | - |
| J1G54_RS02790 () | 501279..501551 | + | 273 | WP_207342816.1 | hypothetical protein | - |
| J1G54_RS02795 () | 501559..501996 | + | 438 | WP_203399003.1 | DUF1320 domain-containing protein | - |
| J1G54_RS02800 () | 501996..502496 | + | 501 | WP_012621986.1 | Gp37 family protein | - |
| J1G54_RS02805 () | 502506..503900 | + | 1395 | WP_203399002.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| J1G54_RS02810 () | 503900..504418 | + | 519 | WP_078208202.1 | phage major tail tube protein | - |
| J1G54_RS02815 () | 504505..504792 | + | 288 | WP_012621991.1 | phage tail assembly protein | - |
| J1G54_RS02820 () | 504794..504922 | + | 129 | WP_106380187.1 | GpE family phage tail protein | - |
| J1G54_RS02825 () | 504907..505191 | - | 285 | WP_012621993.1 | hypothetical protein | - |
| J1G54_RS02830 () | 505235..506971 | + | 1737 | Protein_543 | phage tail tape measure protein | - |
| J1G54_RS02835 () | 507043..508251 | + | 1209 | WP_016527735.1 | IS256 family transposase IS1414 | Transposase |
| J1G54_RS02840 () | 508258..509235 | + | 978 | WP_203399001.1 | hypothetical protein | - |
| J1G54_RS02845 () | 509235..510176 | + | 942 | WP_207342817.1 | phage tail protein | - |
| J1G54_RS02850 () | 510169..510387 | + | 219 | WP_035493224.1 | tail protein X | - |
| J1G54_RS02855 () | 510391..511443 | + | 1053 | WP_203398999.1 | hypothetical protein | - |
| J1G54_RS02860 () | 511458..512042 | + | 585 | WP_021115057.1 | phage baseplate assembly protein V | - |
| J1G54_RS02865 () | 512100..512468 | + | 369 | WP_021115058.1 | GPW/gp25 family protein | - |
| J1G54_RS02870 () | 512455..513570 | + | 1116 | WP_207342818.1 | baseplate J/gp47 family protein | - |
| J1G54_RS02875 () | 513563..514129 | + | 567 | WP_035493216.1 | phage tail protein | - |
| J1G54_RS02880 () | 514153..514758 | + | 606 | Protein_553 | tail fiber protein | - |
| J1G54_RS02885 () | 514852..515832 | + | 981 | Protein_554 | hypothetical protein | - |
| J1G54_RS02890 () | 516493..517059 | + | 567 | WP_207342777.1 | DUF4376 domain-containing protein | - |
| J1G54_RS02895 () | 517052..517519 | + | 468 | WP_026916661.1 | hypothetical protein | - |
| J1G54_RS02900 () | 517669..517782 | + | 114 | WP_016057790.1 | Com family DNA-binding transcriptional regulator | - |
| J1G54_RS02905 () | 517837..518670 | + | 834 | WP_005714585.1 | hypothetical protein | - |
| J1G54_RS02910 () | 518711..518971 | - | 261 | WP_005714586.1 | hypothetical protein | - |
| J1G54_RS02915 () | 519174..519689 | + | 516 | WP_203398995.1 | TIGR00645 family protein | - |
| J1G54_RS02920 () | 519776..521074 | - | 1299 | WP_021118667.1 | FAD-binding oxidoreductase | - |
| J1G54_RS02940 () | 521602..522090 | - | 489 | WP_005710400.1 | transcription elongation factor GreB | - |
| J1G54_RS02945 () | 522090..523025 | - | 936 | WP_021110391.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| J1G54_RS02950 () | 523086..523667 | - | 582 | WP_005710402.1 | hypothetical protein | VF |
| J1G54_RS02955 () | 523767..524927 | - | 1161 | WP_010786053.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| J1G54_RS02960 () | 525128..525436 | - | 309 | WP_005710405.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J1G54_RS02965 () | 525440..525778 | - | 339 | WP_160436559.1 | toxin | Toxin Detail |
| J1G54_RS02990 () | 526618..528057 | + | 1440 | WP_160414413.1 | glutamate--tRNA ligase | - |
| J1G54_RS03000 () | 528524..528790 | - | 267 | Protein_569 | cation-transporting ATPase PacS | - |
| J1G54_RS03005 () | 528745..529654 | - | 910 | Protein_570 | IS256 family transposase ISEc39 | Transposase |
| J1G54_RS03010 () | 529775..530149 | - | 375 | WP_021111694.1 | cytochrome b562 family protein | - |
| J1G54_RS03015 () | 530226..531443 | - | 1218 | WP_021114544.1 | beta-ketoacyl-ACP synthase I | - |
| J1G54_RS03020 () | 531608..532906 | - | 1299 | WP_021114545.1 | adenylosuccinate synthase | - |
| J1G54_RS03025 () | 533190..534077 | - | 888 | WP_021111697.1 | protease modulator HflC | - |
| J1G54_RS03030 () | 534080..535294 | - | 1215 | WP_021118670.1 | FtsH protease activity modulator HflK | - |
| J1G54_RS03035 () | 535540..536211 | + | 672 | WP_005710432.1 | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | - |
| J1G54_RS03040 () | 536211..537347 | + | 1137 | WP_021113271.1 | dTDP-4-amino-4,6-dideoxygalactose transaminase | - |
| J1G54_RS03045 () | 537493..537979 | - | 487 | Protein_578 | hypothetical protein | - |
| J1G54_RS03050 () | 537981..538577 | - | 597 | WP_207342819.1 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|