MGE detailed information
MGE type: Prophage MGE length: 64464 bp
Accession: NZ_CP071489 Location: 953254..1017717 Organism: Glaesserella parasuis strain YHP1815 Replicon: chromosome
Accession: NZ_CP071489 Location: 953254..1017717 Organism: Glaesserella parasuis strain YHP1815 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1G50_RS04845 () | 949026..949313 | + | 288 | WP_005713734.1 | 50S ribosomal protein L25 | - |
| J1G50_RS04850 () | 949508..949656 | - | 149 | Protein_938 | IS1595 family transposase | - |
| J1G50_RS04855 () | 949702..949869 | + | 168 | Protein_939 | phosphatase | - |
| J1G50_RS04860 () | 950102..950680 | + | 579 | Protein_940 | autotransporter domain-containing protein | - |
| J1G50_RS04865 () | 950849..951232 | + | 384 | WP_012621846.1 | 30S ribosome-binding factor RbfA | - |
| J1G50_RS04870 () | 951235..952152 | + | 918 | WP_021119114.1 | tRNA pseudouridine(55) synthase TruB | - |
| J1G50_RS04875 () | 952162..953244 | + | 1083 | WP_026916886.1 | lytic murein transglycosylase | - |
| J1G50_RS04880 () | 953254..954072 | + | 819 | WP_021119113.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH | - |
| J1G50_RS04890 () | 954460..954984 | + | 525 | WP_021119112.1 | hypothetical protein | - |
| J1G50_RS04895 () | 954995..955318 | - | 324 | Protein_946 | IS1595 family transposase ISHps3 | Transposase |
| J1G50_RS04900 () | 955653..956867 | + | 1215 | WP_035496090.1 | aromatic amino acid transporter | - |
| J1G50_RS04905 () | 957015..958232 | + | 1218 | WP_207356842.1 | aromatic amino acid transporter | - |
| J1G50_RS04910 () | 958374..958904 | - | 531 | WP_005714346.1 | endonuclease SmrB | - |
| J1G50_RS04915 () | 958991..959935 | + | 945 | WP_075605823.1 | 50S ribosomal protein L3 N(5)-glutamine methyltransferase | - |
| J1G50_RS04920 () | 960050..961072 | + | 1023 | WP_021109591.1 | HTH-type transcriptional repressor PurR | - |
| J1G50_RS04925 () | 961083..961679 | + | 597 | WP_021113600.1 | DedA family protein | - |
| J1G50_RS04930 () | 962292..967736 | + | 5445 | WP_207356843.1 | hypothetical protein | VF |
| J1G50_RS04935 () | 967846..968474 | - | 629 | Protein_954 | transposase | - |
| J1G50_RS04940 () | 968737..969828 | - | 1092 | WP_005714201.1 | murein transglycosylase A | - |
| J1G50_RS04945 () | 969938..971917 | - | 1980 | WP_164689528.1 | exoribonuclease II | - |
| J1G50_RS04950 () | 972132..972476 | + | 345 | WP_005714197.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J1G50_RS04955 () | 972479..972775 | + | 297 | WP_012621770.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J1G50_RS04960 () | 972988..974196 | + | 1209 | WP_082259179.1 | IS256 family transposase IS1414 | Transposase |
| J1G50_RS04965 () | 974156..975289 | - | 1134 | WP_207356844.1 | DUF3944 domain-containing protein | - |
| J1G50_RS04970 () | 975436..975858 | + | 423 | WP_043894462.1 | helix-turn-helix transcriptional regulator | - |
| J1G50_RS04975 () | 975975..976763 | - | 789 | WP_021117032.1 | hypothetical protein | VF |
| J1G50_RS04980 () | 977006..977632 | + | 627 | WP_016527816.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| J1G50_RS04985 () | 977706..979634 | + | 1929 | WP_021114913.1 | ATP-dependent zinc metalloprotease FtsH | - |
| J1G50_RS04990 () | 979603..979845 | + | 243 | WP_021109709.1 | IS110 family transposase ISNme5 | Transposase |
| J1G50_RS04995 () | 979966..981879 | - | 1914 | WP_207356845.1 | hypothetical protein | VF |
| J1G50_RS05000 () | 981959..982581 | + | 623 | Protein_967 | MarC family protein | - |
| J1G50_RS05005 () | 982717..983949 | + | 1233 | WP_207356846.1 | molybdopterin molybdotransferase MoeA | - |
| J1G50_RS05020 () | 984395..984682 | + | 288 | WP_207356847.1 | integrase arm-type DNA-binding domain-containing protein | - |
| J1G50_RS05025 () | 984760..985611 | + | 852 | WP_207356848.1 | hypothetical protein ; Integrase | Integrase |
| J1G50_RS05030 () | 985649..985906 | - | 258 | WP_021113109.1 | AlpA family phage regulatory protein | - |
| J1G50_RS05035 () | 985875..986171 | - | 297 | WP_021113115.1 | hypothetical protein | - |
| J1G50_RS05040 () | 986174..986569 | - | 396 | WP_021113043.1 | hypothetical protein | - |
| J1G50_RS05045 () | 986585..988846 | - | 2262 | WP_160421920.1 | replication endonuclease | - |
| J1G50_RS05050 () | 988902..990110 | + | 1209 | WP_082259179.1 | IS256 family transposase IS1414 | Transposase |
| J1G50_RS05055 () | 990236..990433 | - | 198 | WP_202386659.1 | hypothetical protein | VF |
| J1G50_RS05060 () | 990479..990607 | - | 129 | Protein_977 | hypothetical protein | VF |
| J1G50_RS05065 () | 990782..991768 | - | 987 | Protein_978 | hypothetical protein | VF |
| J1G50_RS05070 () | 991868..992029 | - | 162 | Protein_979 | hypothetical protein | VF |
| J1G50_RS05075 () | 992048..992596 | - | 549 | Protein_980 | hypothetical protein | VF |
| J1G50_RS05080 () | 993419..994129 | - | 711 | Protein_981 | hypothetical protein | VF |
| J1G50_RS05085 () | 994445..994843 | - | 399 | Protein_982 | hypothetical protein | VF |
| J1G50_RS05090 () | 995408..995479 | - | 72 | Protein_983 | hypothetical protein | VF |
| J1G50_RS05095 () | 995851..996018 | - | 168 | Protein_984 | hypothetical protein | - |
| J1G50_RS05100 () | 996100..996357 | + | 258 | WP_207356865.1 | hypothetical protein | - |
| J1G50_RS05105 () | 996960..997763 | - | 804 | WP_207356849.1 | exodeoxyribonuclease III | - |
| J1G50_RS05110 () | 997881..999257 | - | 1377 | WP_207356850.1 | Na+/H+ antiporter family protein | - |
| J1G50_RS05115 () | 999567..1000517 | - | 951 | WP_021115908.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| J1G50_RS05120 () | 1000756..1001322 | + | 567 | WP_021113906.1 | UbiX family flavin prenyltransferase | - |
| J1G50_RS05125 () | 1001323..1001760 | + | 438 | WP_035524284.1 | hypothetical protein | - |
| J1G50_RS05130 () | 1001970..1004780 | + | 2811 | WP_207356866.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| J1G50_RS05135 () | 1004797..1005636 | + | 840 | WP_010786825.1 | NADPH-dependent 7-cyano-7-deazaguanine reductase QueF | - |
| J1G50_RS05140 () | 1005749..1006231 | + | 483 | WP_021110650.1 | leucine-responsive transcriptional regulator Lrp | - |
| J1G50_RS05145 () | 1006241..1008835 | + | 2595 | WP_075630927.1 | DNA translocase FtsK | - |
| J1G50_RS05150 () | 1008943..1010010 | + | 1068 | WP_021110652.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| J1G50_RS05155 () | 1010178..1010870 | + | 693 | WP_164692118.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| J1G50_RS05160 () | 1010878..1011606 | + | 729 | WP_021109469.1 | hypothetical protein | - |
| J1G50_RS05165 () | 1011865..1012395 | - | 531 | WP_173632029.1 | toxin | - |
| J1G50_RS05170 () | 1012405..1013238 | - | 834 | WP_016528031.1 | hypothetical protein | VF |
| J1G50_RS05175 () | 1013247..1013927 | - | 681 | WP_005714937.1 | toxin | - |
| J1G50_RS05180 () | 1014047..1015204 | - | 1158 | WP_021110656.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| J1G50_RS05185 () | 1015285..1017717 | - | 2433 | WP_160413210.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| J1G50_RS05190 () | 1017972..1018484 | + | 513 | WP_071610191.1 | hemerythrin domain-containing protein | - |
| J1G50_RS05195 () | 1018484..1018714 | + | 231 | WP_012621674.1 | sulfurtransferase TusA family protein | - |
| J1G50_RS05200 () | 1018737..1019081 | - | 345 | WP_005713652.1 | SirB2 family protein | - |
| J1G50_RS05205 () | 1019097..1019630 | - | 534 | WP_021112212.1 | ribosome-associated protein | - |
| J1G50_RS05210 () | 1019759..1021108 | + | 1350 | WP_021110661.1 | metalloprotease PmbA | - |
| J1G50_RS05215 () | 1021334..1021771 | + | 438 | WP_160405404.1 | LacI family DNA-binding transcriptional regulator | - |
| J1G50_RS05220 () | 1022225..1022716 | + | 492 | WP_160448637.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|