MGE detailed information
MGE type: Genomic_island MGE length: 10162 bp
Accession: NZ_CP071439 Location: 2180102..2190263 Organism: Escherichia coli strain EcPNK004 Replicon: chromosome
Accession: NZ_CP071439 Location: 2180102..2190263 Organism: Escherichia coli strain EcPNK004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1F19_RS10325 () | 2175300..2176508 | - | 1209 | WP_001389443.1 | propionate kinase | - |
| J1F19_RS10330 () | 2176534..2177865 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| J1F19_RS10335 () | 2177887..2178876 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| J1F19_RS10340 () | 2178975..2179913 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| J1F19_RS10345 () | 2180102..2180446 | + | 345 | WP_000145848.1 | transcriptional activator TdcR | - |
| J1F19_RS10350 () | 2180702..2181241 | + | 540 | WP_000675750.1 | hypothetical protein | - |
| J1F19_RS10355 () | 2181263..2182450 | + | 1188 | WP_000075585.1 | YhaC family protein | - |
| J1F19_RS10365 () | 2183087..2184232 | - | 1146 | WP_001315025.1 | glycerate 2-kinase | - |
| J1F19_RS10370 () | 2184329..2185219 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| J1F19_RS10375 () | 2185249..2186019 | - | 771 | WP_207291711.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| J1F19_RS10380 () | 2186035..2187369 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| J1F19_RS10385 () | 2187744..2189315 | + | 1572 | WP_001273772.1 | galactarate dehydratase | - |
| J1F19_RS10390 () | 2189464..2189799 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| J1F19_RS10395 () | 2189799..2190263 | + | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| J1F19_RS10400 () | 2190318..2191127 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| J1F19_RS10405 () | 2191376..2192656 | + | 1281 | WP_000681955.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| J1F19_RS10410 () | 2192679..2193152 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| J1F19_RS10415 () | 2193163..2193942 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| J1F19_RS10420 () | 2193932..2194810 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| J1F19_RS10425 () | 2194828..2195262 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|