MGE detailed information
MGE type: Prophage MGE length: 47553 bp
Accession: NZ_CP071439 Location: 122176..169728 Organism: Escherichia coli strain EcPNK004 Replicon: chromosome
Accession: NZ_CP071439 Location: 122176..169728 Organism: Escherichia coli strain EcPNK004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1F19_RS00600 () | 118226..119209 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| J1F19_RS00605 () | 119687..121060 | + | 1374 | WP_000123754.1 | ATP-dependent RNA helicase DbpA | - |
| J1F19_RS00610 () | 121189..122124 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| J1F19_RS00615 () | 122176..123411 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J1F19_RS00620 () | 123413..123628 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| J1F19_RS00625 () | 123707..123916 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 123732..123910 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 123732..123910 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 123732..123910 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 123732..123910 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| J1F19_RS00630 () | 123909..124103 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| J1F19_RS00635 () | 124160..124969 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| J1F19_RS00640 () | 124962..127562 | - | 2601 | WP_001586992.1 | exodeoxyribonuclease VIII | - |
| J1F19_RS00645 () | 127664..127939 | - | 276 | WP_000632297.1 | protein RacC | - |
| J1F19_RS00650 () | 128014..128184 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| J1F19_RS00655 () | 128184..128405 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| J1F19_RS00660 () | 128847..129335 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| J1F19_RS00665 () | 129332..129487 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| J1F19_RS00670 () | 129498..129677 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| J1F19_RS00675 () | 129920..130339 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| J1F19_RS00680 () | 130419..130673 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| J1F19_RS00685 () | 130670..131092 | + | 423 | WP_000693800.1 | hypothetical protein | - |
| J1F19_RS00690 () | 131170..131959 | + | 790 | Protein_137 | hypothetical protein | - |
| J1F19_RS00695 () | 131966..132712 | + | 747 | WP_000788982.1 | ATP-binding protein | - |
| J1F19_RS00700 () | 132735..133460 | + | 726 | WP_000450652.1 | DUF1627 domain-containing protein | - |
| J1F19_RS00705 () | 133477..133899 | + | 423 | WP_001586994.1 | DUF977 family protein | - |
| J1F19_RS00710 () | 134060..134578 | + | 519 | WP_001586995.1 | hypothetical protein | - |
| J1F19_RS00715 () | 134609..136042 | - | 1434 | WP_001586996.1 | hypothetical protein | - |
| J1F19_RS00720 () | 136014..137072 | - | 1059 | WP_001586997.1 | nucleoid-associated protein | - |
| J1F19_RS00725 () | 137402..137557 | + | 156 | WP_207291682.1 | Hok/Gef family protein | - |
| J1F19_RS00730 () | 138021..138620 | + | 600 | WP_000940324.1 | DUF1367 family protein | - |
| J1F19_RS00735 () | 138620..138910 | + | 291 | WP_001586999.1 | DUF1364 domain-containing protein | - |
| J1F19_RS00740 () | 138907..139449 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| J1F19_RS00755 () | 140736..140951 | + | 216 | WP_001587000.1 | phage lysis protein EssD | - |
| J1F19_RS00760 () | 140951..141448 | + | 498 | WP_001135296.1 | lysozyme RrrD | - |
| J1F19_RS00765 () | 141665..141850 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| J1F19_RS00770 () | 142047..143504 | + | 1458 | WP_001097893.1 | Trk system potassium transporter TrkG | - |
| J1F19_RS00775 () | 143642..144430 | + | 789 | WP_001291102.1 | ParB/Srx family N-terminal domain-containing protein | - |
| J1F19_RS00780 () | 144423..145355 | + | 933 | WP_001204032.1 | hypothetical protein | - |
| J1F19_RS00785 () | 145291..145542 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| J1F19_RS00790 () | 145546..146640 | + | 1095 | WP_000089446.1 | terminase small subunit | - |
| J1F19_RS00795 () | 146621..147922 | + | 1302 | WP_001587002.1 | terminase family protein | - |
| J1F19_RS00800 () | 147925..149331 | + | 1407 | WP_000763709.1 | DUF4055 domain-containing protein | - |
| J1F19_RS00805 () | 149315..150427 | + | 1113 | WP_001317036.1 | hypothetical protein | - |
| J1F19_RS00810 () | 150532..151296 | + | 765 | WP_000770038.1 | hypothetical protein | - |
| J1F19_RS00815 () | 151395..152534 | + | 1140 | WP_000918483.1 | hypothetical protein | - |
| J1F19_RS00820 () | 152577..152753 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| J1F19_RS00825 () | 152757..153152 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| J1F19_RS00830 () | 153152..153535 | + | 384 | WP_000524262.1 | hypothetical protein | - |
| J1F19_RS00835 () | 153536..153916 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| J1F19_RS00840 () | 153913..154305 | + | 393 | WP_000144678.1 | hypothetical protein | - |
| J1F19_RS00845 () | 154332..155294 | + | 963 | WP_000094292.1 | hypothetical protein | - |
| J1F19_RS00850 () | 155445..155804 | + | 360 | WP_012565075.1 | hypothetical protein | - |
| J1F19_RS00855 () | 156278..159511 | + | 3234 | WP_001587006.1 | phage tail tape measure protein | - |
| J1F19_RS00860 () | 159504..159842 | + | 339 | WP_000024051.1 | phage tail protein | - |
| J1F19_RS00865 () | 159842..160540 | + | 699 | WP_001578255.1 | phage minor tail protein L | - |
| J1F19_RS00870 () | 160546..161289 | + | 744 | WP_021520058.1 | C40 family peptidase | - |
| J1F19_RS00875 () | 161226..161834 | + | 609 | WP_000090934.1 | tail assembly protein | - |
| J1F19_RS00880 () | 161895..165290 | + | 3396 | WP_001615196.1 | host specificity protein J | - |
| J1F19_RS00885 () | 165358..165957 | + | 600 | WP_001228247.1 | Outer membrane protein X | VF |
| J1F19_RS00890 () | 166022..168397 | + | 2376 | WP_078175068.1 | prophage tail fiber N-terminal domain-containing protein | - |
| J1F19_RS00895 () | 168397..168678 | + | 282 | WP_000654166.1 | hypothetical protein | - |
| J1F19_RS00900 () | 168688..169728 | + | 1041 | WP_001326214.1 | tail fiber domain-containing protein | - |
| J1F19_RS00905 () | 169771..170064 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| J1F19_RS00910 () | 170084..170203 | + | 120 | Protein_179 | tail fiber assembly protein | - |
| J1F19_RS00915 () | 170416..171273 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| J1F19_RS00920 () | 171270..172127 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| J1F19_RS00925 () | 172124..172951 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| J1F19_RS00930 () | 172951..173865 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|