MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 43048 bp
Accession: NZ_CP071409 Location: 3594631..3637678 Organism: [Pantoea] beijingensis strain JZB2120001 Replicon: chromosome
Accession: NZ_CP071409 Location: 3594631..3637678 Organism: [Pantoea] beijingensis strain JZB2120001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J1C60_RS16255 | 3590384..3590707 | + | 324 | WP_128176118.1 | divalent cation tolerance protein CutA | - |
| J1C60_RS16260 | 3590683..3592386 | + | 1704 | WP_128176116.1 | protein-disulfide reductase DsbD | - |
| J1C60_RS16265 | 3592451..3593029 | + | 579 | WP_128176114.1 | transcriptional regulator | - |
| J1C60_RS16270 | 3593343..3594404 | + | 1062 | WP_128176112.1 | methyltransferase | - |
| J1C60_RS16280 | 3594807..3596069 | + | 1263 | WP_128176110.1 | Prophage integrase IntS ; Integrase | Integrase |
| J1C60_RS16285 | 3596578..3597729 | - | 1152 | WP_128176108.1 | Maltose/maltodextrin import ATP-binding protein MalK | VF |
| J1C60_RS16290 | 3597754..3598581 | - | 828 | WP_128176106.1 | carbohydrate ABC transporter permease | - |
| J1C60_RS16295 | 3598574..3599434 | - | 861 | WP_128176104.1 | Trehalose transport system permease protein SugA | VF |
| J1C60_RS16300 | 3599503..3600771 | - | 1269 | WP_128176102.1 | sugar ABC transporter substrate-binding protein | - |
| J1C60_RS16305 | 3600800..3601813 | - | 1014 | WP_128176100.1 | Gfo/Idh/MocA family oxidoreductase | - |
| J1C60_RS16310 | 3602149..3602847 | + | 699 | WP_128176098.1 | putative N-acetylmannosamine-6-phosphate 2-epimerase | - |
| J1C60_RS16315 | 3602844..3603713 | + | 870 | WP_128176096.1 | N-acetylmannosamine kinase | - |
| J1C60_RS16320 | 3603720..3604502 | - | 783 | WP_128176094.1 | GntR family transcriptional regulator | - |
| J1C60_RS16325 | 3604667..3605494 | - | 828 | WP_128176240.1 | MurR/RpiR family transcriptional regulator | - |
| J1C60_RS16330 | 3605666..3607222 | + | 1557 | WP_128176092.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| J1C60_RS16335 | 3607219..3607920 | + | 702 | WP_128176090.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| J1C60_RS16340 | 3608262..3609188 | + | 927 | WP_128176088.1 | hypothetical protein | - |
| J1C60_RS16345 | 3609326..3609511 | + | 186 | WP_128176086.1 | AlpA family transcriptional regulator | - |
| J1C60_RS16350 | 3609613..3610197 | + | 585 | WP_128176084.1 | DUF2857 domain-containing protein | - |
| J1C60_RS16355 | 3610187..3610396 | + | 210 | WP_128176082.1 | TraR/DksA family transcriptional regulator | - |
| J1C60_RS16360 | 3610817..3611050 | + | 234 | WP_128176080.1 | hypothetical protein | - |
| J1C60_RS16365 | 3611124..3611834 | + | 711 | WP_128176078.1 | Type IV secretion system protein virB1 | VF |
| J1C60_RS16370 | 3611834..3612127 | + | 294 | WP_128176076.1 | Type IV secretion system protein PtlA | VF |
| J1C60_RS16375 | 3612138..3614882 | + | 2745 | WP_128176074.1 | Type IV secretion system protein virB4 | VF |
| J1C60_RS16380 | 3614903..3615607 | + | 705 | WP_128176239.1 | type IV secretion system protein | - |
| J1C60_RS16385 | 3615619..3615846 | + | 228 | WP_128176073.1 | EexN family lipoprotein | - |
| J1C60_RS16390 | 3615857..3616921 | + | 1065 | WP_128176071.1 | type IV secretion system protein | - |
| J1C60_RS16395 | 3617011..3617148 | + | 138 | WP_164877271.1 | hypothetical protein | - |
| J1C60_RS16400 | 3617141..3617824 | + | 684 | WP_128176069.1 | Type IV secretion system protein PtlE | VF |
| J1C60_RS16405 | 3617824..3618729 | + | 906 | WP_128176067.1 | Type IV secretion system protein virB9 | VF |
| J1C60_RS16410 | 3618749..3620002 | + | 1254 | WP_128176065.1 | Protein virB10 | VF |
| J1C60_RS16415 | 3619992..3621017 | + | 1026 | WP_128176063.1 | Type IV secretion system protein VirB11 | VF |
| J1C60_RS16420 | 3621014..3621412 | + | 399 | WP_128176061.1 | cag pathogenicity island Cag12 family protein | - |
| J1C60_RS16425 | 3621457..3621759 | + | 303 | WP_128176059.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| J1C60_RS16430 | 3621809..3622114 | + | 306 | WP_128176057.1 | dpoa decarboxylase | - |
| J1C60_RS16435 | 3622892..3624628 | + | 1737 | WP_128176055.1 | type IV secretory system conjugative DNA transfer family protein | - |
| J1C60_RS16440 | 3624637..3625389 | + | 753 | WP_128176053.1 | MobC family replication-relaxation protein | - |
| J1C60_RS16445 | 3625386..3625700 | - | 315 | WP_128176051.1 | CcdB family protein | Toxin Detail |
| J1C60_RS16450 | 3625703..3625939 | - | 237 | WP_128176049.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| J1C60_RS16455 | 3626252..3627205 | - | 954 | WP_128176047.1 | zincin-like metallopeptidase domain-containing protein | - |
| J1C60_RS16460 | 3627697..3628575 | + | 879 | WP_128176045.1 | hypothetical protein | - |
| J1C60_RS16465 | 3628562..3631093 | - | 2532 | WP_128176044.1 | DEAD/DEAH box helicase | - |
| J1C60_RS16470 | 3631090..3631989 | - | 900 | WP_164877270.1 | DUF1837 domain-containing protein | - |
| J1C60_RS16475 | 3632707..3634506 | - | 1800 | WP_128176040.1 | ATP-dependent helicase | - |
| J1C60_RS16480 | 3634509..3636647 | - | 2139 | WP_128176038.1 | AAA family ATPase | - |
| J1C60_RS16485 | 3638081..3639751 | + | 1671 | WP_242080465.1 | S-type pyocin domain-containing protein | - |
| J1C60_RS16490 | 3639751..3640218 | + | 468 | WP_047358704.1 | DUF6392 family protein | - |
| J1C60_RS16500 | 3641649..3641964 | - | 316 | Protein_3221 | transposase | - |
| J1C60_RS16505 | 3642248..3642574 | - | 327 | WP_128175593.1 | NIPSNAP family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|