MGE detailed information
MGE type: Prophage MGE length: 53640 bp
Accession: NZ_CP071259 Location: 2436240..2489879 Organism: Escherichia coli strain MEI005 Replicon: chromosome
Accession: NZ_CP071259 Location: 2436240..2489879 Organism: Escherichia coli strain MEI005 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
J0G24_RS11790 (2431621) | 2431621..2432331 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
J0G24_RS11795 (2432334) | 2432334..2432894 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
J0G24_RS11800 (2432929) | 2432929..2433270 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
J0G24_RS11805 (2433405) | 2433405..2433731 | + | 327 | WP_000598292.1 | YnfA family protein | - |
J0G24_RS11810 (2433937) | 2433937..2435151 | + | 1215 | WP_001439078.1 | starvation-sensing protein RspA | - |
J0G24_RS11815 (2435163) | 2435163..2436182 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
J0G24_RS11820 (2436370) | 2436370..2437650 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
J0G24_RS11825 (2437685) | 2437685..2437936 | - | 252 | WP_000005552.1 | excisionase family protein | - |
J0G24_RS11830 (2438009) | 2438009..2440480 | - | 2472 | WP_000048327.1 | exonuclease | - |
J0G24_RS11835 (2440573) | 2440573..2440764 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
J0G24_RS11840 (2440761) | 2440761..2440949 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
J0G24_RS11845 (2441517) | 2441517..2441735 | - | 219 | WP_001171952.1 | protein YdfC | - |
J0G24_RS25325 (2441765) | 2441765..2441893 | - | 129 | WP_000344930.1 | protein YdfB | - |
J0G24_RS11850 (2441895) | 2441895..2442050 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
J0G24_RS11855 (2442219) | 2442219..2442626 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
J0G24_RS11860 (2442708) | 2442708..2442935 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
J0G24_RS11865 (2442919) | 2442919..2443440 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
J0G24_RS11870 (2443421) | 2443421..2444386 | + | 966 | WP_000054514.1 | hypothetical protein | - |
J0G24_RS11875 (2444427) | 2444427..2444849 | + | 423 | WP_001151260.1 | DUF977 family protein | - |
J0G24_RS11880 (2444846) | 2444846..2445335 | + | 490 | Protein_2330 | class I SAM-dependent methyltransferase | - |
J0G24_RS11885 (2445813) | 2445813..2446233 | + | 421 | Protein_2331 | hypothetical protein | - |
J0G24_RS11890 (2446889) | 2446889..2447938 | + | 1050 | Protein_2332 | ISNCY family transposase ISCARN112 | Transposase |
J0G24_RS11895 (2448059) | 2448059..2448208 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
J0G24_RS11900 (2448645) | 2448645..2448977 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
J0G24_RS11905 (2449180) | 2449180..2449485 | - | 306 | WP_001326990.1 | protein YdfV | - |
J0G24_RS11910 (2449510) | 2449510..2449749 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
J0G24_RS11915 (2449749) | 2449749..2450036 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
J0G24_RS11920 (2450108) | 2450108..2450263 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
J0G24_RS11925 (2450480) | 2450480..2450731 | + | 252 | WP_000980994.1 | protein Rem | - |
J0G24_RS11930 (2450798) | 2450798..2451076 | + | 279 | WP_012304870.1 | hypothetical protein | - |
J0G24_RS11935 (2451078) | 2451078..2452127 | + | 1050 | WP_001439074.1 | DUF968 domain-containing protein | - |
J0G24_RS11940 (2452141) | 2452141..2452893 | + | 753 | WP_001047135.1 | antitermination protein | - |
J0G24_RS11945 (2453171) | 2453171..2453260 | - | 90 | WP_122985911.1 | hypothetical protein | - |
J0G24_RS11950 (2453315) | 2453315..2453527 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
J0G24_RS11955 (2453826) | 2453826..2454041 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
J0G24_RS11960 (2454405) | 2454405..2454575 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
J0G24_RS11965 (2454794) | 2454794..2455009 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
J0G24_RS11970 (2455014) | 2455014..2455325 | + | 312 | WP_000189916.1 | YdfR family protein | - |
J0G24_RS11975 (2455322) | 2455322..2455855 | + | 534 | WP_001092971.1 | lysozyme | - |
J0G24_RS11980 (2455852) | 2455852..2456349 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
J0G24_RS11985 (2456712) | 2456712..2456924 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
J0G24_RS11990 (2456935) | 2456935..2457123 | + | 189 | WP_071524604.1 | cold-shock protein | - |
J0G24_RS11995 (2457126) | 2457126..2457191 | + | 66 | WP_122985912.1 | small protein YnfR | - |
J0G24_RS12000 (2457196) | 2457196..2457426 | + | 231 | WP_000720962.1 | protein YnfN | - |
J0G24_RS12005 (2457598) | 2457598..2457771 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
J0G24_RS12010 (2457923) | 2457923..2458333 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
J0G24_RS12015 (2458391) | 2458391..2458624 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
J0G24_RS12020 (2459013) | 2459013..2459558 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
J0G24_RS12025 (2459533) | 2459533..2461458 | + | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
J0G24_RS12030 (2461455) | 2461455..2461661 | + | 207 | WP_000198149.1 | gpW family protein | - |
J0G24_RS12035 (2461658) | 2461658..2463259 | + | 1602 | WP_001324962.1 | phage portal protein | - |
J0G24_RS12040 (2463240) | 2463240..2464559 | + | 1320 | WP_000123245.1 | S49 family peptidase | - |
J0G24_RS12045 (2464569) | 2464569..2464901 | + | 333 | WP_001358225.1 | head decoration protein | - |
J0G24_RS12050 (2464957) | 2464957..2465982 | + | 1026 | WP_000063254.1 | major capsid protein | - |
J0G24_RS12055 (2466024) | 2466024..2466419 | + | 396 | WP_000158876.1 | DNA-packaging protein FI | - |
J0G24_RS12060 (2466431) | 2466431..2466784 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
J0G24_RS12065 (2466796) | 2466796..2467374 | + | 579 | WP_000985116.1 | phage tail protein | - |
J0G24_RS12070 (2467371) | 2467371..2467766 | + | 396 | WP_000683143.1 | phage minor tail U family protein | - |
J0G24_RS12075 (2467774) | 2467774..2468514 | + | 741 | WP_001439072.1 | phage tail protein | - |
J0G24_RS12080 (2468530) | 2468530..2468952 | + | 423 | WP_000479139.1 | phage minor tail protein G | - |
J0G24_RS12085 (2468934) | 2468934..2469368 | + | 435 | WP_000459480.1 | phage tail assembly protein T | - |
J0G24_RS12090 (2469361) | 2469361..2471940 | + | 2580 | WP_000840352.1 | phage tail tape measure protein | - |
J0G24_RS12095 (2471937) | 2471937..2472266 | + | 330 | WP_000847345.1 | phage tail protein | - |
J0G24_RS12100 (2472266) | 2472266..2472964 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
J0G24_RS12105 (2472970) | 2472970..2473713 | + | 744 | WP_023568777.1 | C40 family peptidase | - |
J0G24_RS12110 (2473710) | 2473710..2474282 | + | 573 | WP_000847666.1 | tail assembly protein | - |
J0G24_RS12115 (2474343) | 2474343..2477822 | + | 3480 | WP_000515506.1 | host specificity protein J | - |
J0G24_RS12120 (2477890) | 2477890..2478489 | + | 600 | WP_001233116.1 | Outer membrane protein X | VF |
J0G24_RS12125 (2478554) | 2478554..2482084 | + | 3531 | WP_000279149.1 | prophage tail fiber N-terminal domain-containing protein | - |
J0G24_RS12130 (2482084) | 2482084..2482659 | + | 576 | WP_001439069.1 | tail fiber assembly protein | - |
J0G24_RS12135 (2482782) | 2482782..2483944 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
J0G24_RS12140 (2484018) | 2484018..2484608 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
J0G24_RS12145 (2484925) | 2484925..2485158 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
J0G24_RS12150 (2485227) | 2485227..2485340 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
J0G24_RS12155 (2485944) | 2485944..2487227 | + | 1284 | Protein_2385 | MHS family MFS transporter YdfJ | - |
J0G24_RS12160 (2487316) | 2487316..2488776 | + | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
J0G24_RS12165 (2488812) | 2488812..2489015 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
J0G24_RS12170 (2489193) | 2489193..2489879 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
J0G24_RS12175 (2489968) | 2489968..2490714 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
J0G24_RS12180 (2490851) | 2490851..2492896 | + | 2046 | WP_001295662.1 | peptidyl-dipeptidase Dcp | - |
J0G24_RS12185 (2492941) | 2492941..2493459 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
J0G24_RS12190 (2493735) | 2493735..2494127 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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