MGE detailed information
MGE type: Prophage MGE length: 117537 bp
Accession: NZ_CP071228 Location: 4372060..4489596 Organism: Serratia marcescens subsp. marcescens ATCC 13880 substr. Sm_S78_jyu2015 Replicon: chromosome
Accession: NZ_CP071228 Location: 4372060..4489596 Organism: Serratia marcescens subsp. marcescens ATCC 13880 substr. Sm_S78_jyu2015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J0F98_RS20820 () | 4367108..4368151 | + | 1044 | WP_016930122.1 | LacI family DNA-binding transcriptional regulator | - |
| J0F98_RS20825 () | 4368207..4368629 | - | 423 | WP_004937307.1 | TonB system transport protein ExbD | - |
| J0F98_RS20830 () | 4368633..4369613 | - | 981 | WP_072270933.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| J0F98_RS20835 () | 4370045..4371241 | + | 1197 | WP_033639378.1 | cystathionine beta-lyase | - |
| J0F98_RS20840 () | 4371387..4372049 | + | 663 | WP_004937300.1 | DedA family protein | - |
| J0F98_RS20845 () | 4372060..4372980 | - | 921 | WP_033639377.1 | hypothetical protein | VF |
| J0F98_RS20850 () | 4373088..4374116 | + | 1029 | WP_033639376.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| J0F98_RS20855 () | 4374124..4375041 | - | 918 | WP_015379072.1 | AraC family transcriptional regulator | - |
| J0F98_RS20860 () | 4375238..4376401 | + | 1164 | WP_016930127.1 | alcohol dehydrogenase | - |
| J0F98_RS20865 () | 4376687..4377511 | + | 825 | WP_004937289.1 | 2,5-didehydrogluconate reductase DkgA | - |
| J0F98_RS20870 () | 4377654..4378259 | + | 606 | WP_016930129.1 | hypothetical protein | VF |
| J0F98_RS20875 () | 4378323..4380491 | - | 2169 | WP_004937285.1 | YgiQ family radical SAM protein | - |
| J0F98_RS20880 () | 4380572..4381306 | - | 735 | WP_016930130.1 | GntR family transcriptional regulator | - |
| J0F98_RS20885 () | 4381965..4383362 | + | 1398 | WP_004937281.1 | cytosine permease | - |
| J0F98_RS20890 () | 4383359..4384291 | + | 933 | WP_033639374.1 | ribokinase | - |
| J0F98_RS20895 () | 4384325..4385575 | - | 1251 | WP_033641351.1 | nucleoside permease | - |
| J0F98_RS20900 () | 4385657..4386478 | - | 822 | WP_033639373.1 | xanthosine phosphorylase | - |
| J0F98_RS20905 () | 4386616..4387527 | + | 912 | WP_033639372.1 | hypothetical protein | VF |
| J0F98_RS20910 () | 4387545..4388960 | - | 1416 | WP_004937270.1 | cell division protein FtsP | - |
| J0F98_RS20915 () | 4389093..4389827 | - | 735 | WP_033639371.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| J0F98_RS20920 () | 4390074..4392347 | - | 2274 | WP_033639369.1 | DNA topoisomerase IV subunit A | - |
| J0F98_RS20925 () | 4392673..4393254 | + | 582 | WP_016930136.1 | NAD(P)H-dependent oxidoreductase | - |
| J0F98_RS20930 () | 4393288..4393596 | + | 309 | WP_004937258.1 | antibiotic biosynthesis monooxygenase | - |
| J0F98_RS20935 () | 4393605..4394501 | - | 897 | WP_033639368.1 | hypothetical protein | VF |
| J0F98_RS20940 () | 4394584..4396479 | - | 1896 | WP_025304305.1 | DNA topoisomerase IV subunit B | - |
| J0F98_RS20945 () | 4396526..4397110 | - | 585 | WP_015379081.1 | esterase YqiA | - |
| J0F98_RS20950 () | 4397110..4397937 | - | 828 | WP_033639367.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| J0F98_RS20955 () | 4397965..4398390 | - | 426 | WP_004937244.1 | DUF1249 family protein | - |
| J0F98_RS20960 () | 4398390..4399022 | - | 633 | WP_004937242.1 | ADP-ribose diphosphatase | - |
| J0F98_RS20965 () | 4399370..4400869 | + | 1500 | WP_016930142.1 | multidrug efflux transporter outer membrane subunit HasF | - |
| J0F98_RS20970 () | 4401022..4402971 | + | 1950 | WP_033639366.1 | hypothetical protein | VF |
| J0F98_RS20975 () | 4402968..4404398 | - | 1431 | WP_033639365.1 | dihydroxyacetone kinase subunit DhaM | - |
| J0F98_RS20980 () | 4404410..4405042 | - | 633 | WP_033639364.1 | dihydroxyacetone kinase ADP-binding subunit DhaL | - |
| J0F98_RS20985 () | 4405052..4406122 | - | 1071 | WP_033639363.1 | dihydroxyacetone kinase subunit DhaK | - |
| J0F98_RS20990 () | 4406174..4407274 | - | 1101 | WP_033639362.1 | glycerol dehydrogenase | - |
| J0F98_RS20995 () | 4407627..4408289 | + | 663 | WP_004937226.1 | DUF1190 family protein | - |
| J0F98_RS21000 () | 4408293..4409453 | + | 1161 | WP_016930148.1 | glutathionylspermidine synthase family protein | - |
| J0F98_RS21005 () | 4409502..4410284 | - | 783 | WP_028127592.1 | 4,5-DOPA dioxygenase extradiol | - |
| J0F98_RS21010 () | 4410607..4412139 | + | 1533 | WP_033639361.1 | alkaline phosphatase | - |
| J0F98_RS21015 () | 4412193..4412846 | - | 654 | WP_004937218.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| J0F98_RS21020 () | 4413262..4413537 | + | 276 | WP_004937216.1 | accessory factor UbiK family protein | - |
| J0F98_RS21025 () | 4413589..4415019 | - | 1431 | WP_004937214.1 | hypothetical protein | VF |
| J0F98_RS21030 () | 4415097..4417934 | - | 2838 | WP_033639360.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| J0F98_RS21035 () | 4417980..4419287 | - | 1308 | WP_033639359.1 | inorganic triphosphatase | - |
| J0F98_RS21040 () | 4419566..4420186 | + | 621 | WP_016930153.1 | SH3 domain-containing protein | - |
| J0F98_RS21045 () | 4420309..4421553 | + | 1245 | WP_033639358.1 | multifunctional CCA addition/repair protein | - |
| J0F98_RS21050 () | 4421595..4422419 | - | 825 | WP_033639357.1 | undecaprenyl-diphosphate phosphatase | - |
| J0F98_RS21055 () | 4422553..4422912 | - | 360 | WP_033639356.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| J0F98_RS21060 () | 4423020..4423658 | + | 639 | WP_004937201.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| J0F98_RS21065 () | 4423689..4424702 | - | 1014 | WP_028127590.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| J0F98_RS21070 () | 4425028..4425243 | + | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| J0F98_RS21075 () | 4425380..4427128 | + | 1749 | WP_033639355.1 | DNA primase | - |
| J0F98_RS21080 () | 4427286..4429127 | + | 1842 | WP_004937194.1 | RNA polymerase sigma factor RpoD | - |
| J0F98_RS21085 () | 4429183..4429626 | - | 444 | WP_033641350.1 | nuclear transport factor 2 family protein | - |
| J0F98_RS21090 () | 4429652..4430140 | - | 489 | WP_033639354.1 | G/U mismatch-specific DNA glycosylase | - |
| J0F98_RS21100 () | 4430521..4430751 | - | 231 | WP_071998163.1 | DNA-binding transcriptional regulator | - |
| J0F98_RS21105 () | 4430842..4431990 | - | 1149 | WP_033639353.1 | phage late control D family protein | - |
| J0F98_RS21110 () | 4431987..4432472 | - | 486 | WP_033639352.1 | phage tail protein | - |
| J0F98_RS21115 () | 4432477..4435323 | - | 2847 | WP_033639351.1 | phage tail tape measure protein | - |
| J0F98_RS21120 () | 4435316..4435438 | - | 123 | WP_023456045.1 | GpE family phage tail protein | - |
| J0F98_RS21125 () | 4435471..4435752 | - | 282 | WP_033639350.1 | phage tail assembly protein | - |
| J0F98_RS21130 () | 4435807..4436316 | - | 510 | WP_023447563.1 | phage major tail tube protein | - |
| J0F98_RS21135 () | 4436332..4437501 | - | 1170 | WP_033639349.1 | phage tail sheath protein | - |
| J0F98_RS21140 () | 4438165..4438449 | + | 285 | WP_161781916.1 | hypothetical protein | - |
| J0F98_RS21145 () | 4438618..4439163 | - | 546 | WP_033639348.1 | tail fiber assembly protein | - |
| J0F98_RS21150 () | 4439165..4441999 | - | 2835 | WP_103086411.1 | phage tail protein | - |
| J0F98_RS21155 () | 4442006..4442539 | - | 534 | WP_015379109.1 | phage tail protein I | - |
| J0F98_RS21160 () | 4442532..4443440 | - | 909 | WP_033639347.1 | baseplate assembly protein | - |
| J0F98_RS21165 () | 4443445..4443795 | - | 351 | WP_033639346.1 | GPW/gp25 family protein | - |
| J0F98_RS21170 () | 4443792..4443932 | - | 141 | WP_023447556.1 | hypothetical protein | - |
| J0F98_RS21175 () | 4443943..4444572 | - | 630 | WP_033639345.1 | phage baseplate assembly protein V | - |
| J0F98_RS21180 () | 4444646..4445092 | - | 447 | WP_033639344.1 | phage virion morphogenesis protein | - |
| J0F98_RS21185 () | 4445079..4445552 | - | 474 | WP_033639343.1 | phage tail protein | - |
| J0F98_RS21190 () | 4445648..4446076 | - | 429 | WP_033639342.1 | Rz-like lysis system protein LysB | - |
| J0F98_RS21195 () | 4446073..4446585 | - | 513 | WP_033639341.1 | lysozyme | - |
| J0F98_RS21200 () | 4446569..4446778 | - | 210 | WP_015379117.1 | hypothetical protein | - |
| J0F98_RS21205 () | 4446781..4446984 | - | 204 | WP_015379118.1 | tail protein X | - |
| J0F98_RS21210 () | 4446984..4447472 | - | 489 | WP_033639340.1 | head completion/stabilization protein | - |
| J0F98_RS21215 () | 4447566..4448225 | - | 660 | WP_033639339.1 | terminase endonuclease subunit | - |
| J0F98_RS21220 () | 4448228..4449439 | - | 1212 | WP_033639338.1 | phage major capsid protein, P2 family | - |
| J0F98_RS21225 () | 4449482..4450297 | - | 816 | WP_033639337.1 | GPO family capsid scaffolding protein | - |
| J0F98_RS21230 () | 4450440..4452212 | + | 1773 | WP_033639336.1 | terminase ATPase subunit family protein | - |
| J0F98_RS21235 () | 4452212..4452898 | + | 687 | WP_060445964.1 | terminase family protein | - |
| J0F98_RS21240 () | 4452895..4453929 | + | 1035 | WP_033639335.1 | phage portal protein | - |
| J0F98_RS21245 () | 4453974..4454315 | - | 342 | WP_033633573.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J0F98_RS21250 () | 4454315..4454569 | - | 255 | WP_071605322.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J0F98_RS21255 () | 4454939..4455136 | - | 198 | WP_126186641.1 | hypothetical protein | - |
| J0F98_RS21260 () | 4455184..4455408 | - | 225 | WP_033639333.1 | hypothetical protein | - |
| J0F98_RS21265 () | 4455447..4457663 | - | 2217 | WP_033639332.1 | replication endonuclease | - |
| J0F98_RS21270 () | 4457660..4457974 | - | 315 | WP_033639331.1 | DUF3850 domain-containing protein | - |
| J0F98_RS21275 () | 4457988..4458161 | - | 174 | WP_162531492.1 | hypothetical protein | - |
| J0F98_RS21280 () | 4458101..4458325 | - | 225 | WP_033639330.1 | TraR/DksA C4-type zinc finger protein | - |
| J0F98_RS21285 () | 4458325..4458567 | - | 243 | WP_023447523.1 | DUF2732 family protein | - |
| J0F98_RS21290 () | 4458631..4458933 | - | 303 | WP_031221632.1 | hypothetical protein | - |
| J0F98_RS21295 () | 4458945..4459124 | - | 180 | WP_072009648.1 | DUF2724 domain-containing protein | - |
| J0F98_RS21300 () | 4459135..4459644 | - | 510 | WP_033639329.1 | phage regulatory CII family protein | - |
| J0F98_RS21305 () | 4459676..4459939 | - | 264 | WP_072009646.1 | hypothetical protein | - |
| J0F98_RS21310 () | 4460075..4460662 | + | 588 | WP_033641347.1 | phage repressor protein CI | - |
| J0F98_RS21315 () | 4460662..4461729 | + | 1068 | WP_042706790.1 | hypothetical protein ; Integrase | Integrase |
| J0F98_RS21320 () | 4461929..4462327 | - | 399 | WP_197724951.1 | helix-turn-helix transcriptional regulator | - |
| J0F98_RS21325 () | 4462430..4463038 | + | 609 | WP_033639328.1 | FMN-dependent NADH-azoreductase | - |
| J0F98_RS21330 () | 4463186..4464088 | + | 903 | WP_033639327.1 | pirin family protein | - |
| J0F98_RS21335 () | 4464227..4464667 | + | 441 | WP_033639326.1 | hypothetical protein | ARG |
| J0F98_RS21340 () | 4464967..4465608 | + | 642 | WP_033639325.1 | YbhB/YbcL family Raf kinase inhibitor-like protein | - |
| J0F98_RS21345 () | 4465757..4466506 | + | 750 | WP_206640384.1 | helix-turn-helix domain-containing protein | - |
| J0F98_RS21350 () | 4466520..4467236 | - | 717 | WP_016930165.1 | HPP family protein | - |
| J0F98_RS21355 () | 4467408..4468043 | + | 636 | WP_004937171.1 | glutathione transferase | - |
| J0F98_RS21360 () | 4468117..4469358 | - | 1242 | WP_033639324.1 | amino acid permease | - |
| J0F98_RS21365 () | 4469417..4470871 | - | 1455 | WP_033639323.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| J0F98_RS21370 () | 4470884..4472149 | - | 1266 | WP_016930169.1 | hypothetical protein | VF |
| J0F98_RS21375 () | 4472271..4473743 | + | 1473 | WP_033639322.1 | PLP-dependent aminotransferase family protein | - |
| J0F98_RS21380 () | 4473766..4475385 | - | 1620 | WP_033639321.1 | ATP-binding cassette domain-containing protein | - |
| J0F98_RS21385 () | 4475810..4477831 | + | 2022 | WP_033639320.1 | NADPH-dependent 2,4-dienoyl-CoA reductase | - |
| J0F98_RS21390 () | 4477866..4479005 | - | 1140 | WP_033639319.1 | 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG | - |
| J0F98_RS21395 () | 4479155..4479661 | + | 507 | WP_004937154.1 | M48 family metallopeptidase | - |
| J0F98_RS21400 () | 4479711..4480691 | + | 981 | WP_033639318.1 | Gfo/Idh/MocA family oxidoreductase | - |
| J0F98_RS21405 () | 4480693..4481424 | + | 732 | WP_033639317.1 | glutamine amidotransferase | - |
| J0F98_RS21410 () | 4481680..4482645 | + | 966 | WP_162835077.1 | TerC family protein | - |
| J0F98_RS21415 () | 4482908..4484143 | + | 1236 | WP_033639315.1 | serine/threonine transporter SstT | - |
| J0F98_RS21420 () | 4484197..4485684 | - | 1488 | WP_033639314.1 | altronate dehydratase family protein | - |
| J0F98_RS21425 () | 4485705..4487117 | - | 1413 | WP_033639313.1 | glucuronate isomerase | - |
| J0F98_RS21430 () | 4487402..4488700 | + | 1299 | WP_015379157.1 | MFS transporter | - |
| J0F98_RS21435 () | 4488820..4489596 | + | 777 | WP_004937137.1 | transcriptional regulator ExuR | - |
| J0F98_RS21440 () | 4489783..4490229 | + | 447 | WP_004937135.1 | hypothetical protein | - |
| J0F98_RS21445 () | 4490366..4491046 | + | 681 | WP_033639312.1 | DedA family protein | - |
| J0F98_RS21450 () | 4491043..4491417 | + | 375 | WP_004937130.1 | EnvZ/OmpR regulon moderator MzrA | - |
| J0F98_RS21455 () | 4491661..4492032 | + | 372 | WP_033639311.1 | DUF1090 domain-containing protein | - |
| J0F98_RS21460 () | 4492197..4492502 | + | 306 | WP_004937125.1 | YqjD family protein | - |
| J0F98_RS21465 () | 4492505..4492906 | + | 402 | WP_015379160.1 | phage holin family protein | - |
| J0F98_RS21470 () | 4492903..4493190 | + | 288 | WP_016930185.1 | YqjK-like family protein | - |
| J0F98_RS21475 () | 4493486..4493881 | + | 396 | WP_016930186.1 | DoxX family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|