MGE detailed information
MGE type: Prophage MGE length: 58008 bp
Accession: NZ_CP071100 Location: 1520588..1578595 Organism: Staphylococcus aureus strain PS/BAC/169/17/W Replicon: chromosome
Accession: NZ_CP071100 Location: 1520588..1578595 Organism: Staphylococcus aureus strain PS/BAC/169/17/W Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYA66_RS07160 (1516015) | 1516015..1516968 | - | 954 | WP_001163805.1 | helix-turn-helix domain-containing protein | - |
| JYA66_RS07165 (1517076) | 1517076..1517324 | + | 249 | WP_001151997.1 | ferredoxin | - |
| JYA66_RS07170 (1517430) | 1517430..1517975 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| JYA66_RS07175 (1518623) | 1518623..1519534 | - | 912 | Protein_1417 | DUF1672 domain-containing protein | - |
| JYA66_RS07180 (1519592) | 1519592..1520497 | - | 906 | WP_211020127.1 | DUF1672 domain-containing protein | - |
| JYA66_RS07185 (1520588) | 1520588..1520803 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| JYA66_RS07190 (1521176) | 1521176..1522012 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| JYA66_RS07195 (1522390) | 1522390..1523145 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| JYA66_RS07200 (1523157) | 1523157..1523411 | - | 255 | WP_000611512.1 | phage holin | - |
| JYA66_RS07205 (1523463) | 1523463..1523570 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - (1523492) | 1523492..1523631 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1523492) | 1523492..1523631 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1523492) | 1523492..1523631 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - (1523492) | 1523492..1523631 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| JYA66_RS07210 (1523623) | 1523623..1523799 | - | 177 | WP_072357969.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| JYA66_RS07215 (1523949) | 1523949..1524245 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| JYA66_RS07220 (1524303) | 1524303..1524590 | - | 288 | WP_211020129.1 | hypothetical protein | - |
| JYA66_RS07225 (1524637) | 1524637..1524789 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| JYA66_RS07230 (1524779) | 1524779..1528564 | - | 3786 | WP_211020131.1 | phage tail spike protein | - |
| JYA66_RS07235 (1528580) | 1528580..1530071 | - | 1492 | Protein_1429 | phage tail family protein | - |
| JYA66_RS07240 (1530071) | 1530071..1534725 | - | 4655 | Protein_1430 | phage tail tape measure protein | - |
| JYA66_RS07245 (1534781) | 1534781..1534903 | - | 123 | WP_000571956.1 | hypothetical protein | - |
| JYA66_RS07250 (1534963) | 1534963..1535410 | - | 448 | Protein_1432 | hypothetical protein | - |
| JYA66_RS07255 (1535475) | 1535475..1536430 | - | 956 | Protein_1433 | Ig-like domain-containing protein | - |
| JYA66_RS07260 (1536431) | 1536431..1536811 | - | 381 | WP_000608369.1 | hypothetical protein | - |
| JYA66_RS07265 (1536808) | 1536808..1537185 | - | 378 | WP_000501001.1 | HK97 gp10 family phage protein | - |
| JYA66_RS07270 (1537185) | 1537185..1537517 | - | 333 | WP_000671501.1 | head-tail adaptor protein | - |
| JYA66_RS07275 (1537507) | 1537507..1537839 | - | 333 | WP_001177664.1 | head-tail connector protein | - |
| JYA66_RS07280 (1537848) | 1537848..1538006 | - | 159 | WP_001240639.1 | hypothetical protein | - |
| JYA66_RS07285 (1538043) | 1538043..1539278 | - | 1236 | WP_000849953.1 | phage major capsid protein | - |
| JYA66_RS07290 (1539365) | 1539365..1539949 | - | 585 | WP_025173991.1 | HK97 family phage prohead protease | - |
| JYA66_RS07295 (1540368) | 1540368..1541624 | - | 1257 | WP_000511070.1 | phage portal protein | - |
| JYA66_RS07300 (1541845) | 1541845..1543539 | - | 1695 | WP_000568449.1 | phage terminase family protein | - |
| JYA66_RS07305 (1543539) | 1543539..1544010 | - | 472 | Protein_1443 | phage terminase small subunit P27 family | - |
| JYA66_RS13715 (1544057) | 1544057..1544284 | - | 228 | WP_282098271.1 | HNH endonuclease signature motif containing protein | - |
| JYA66_RS07315 (1544477) | 1544477..1544929 | - | 453 | WP_000406186.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| JYA66_RS07320 (1545044) | 1545044..1545496 | - | 453 | WP_000282757.1 | hypothetical protein | - |
| JYA66_RS07325 (1545519) | 1545519..1545719 | - | 201 | WP_000265041.1 | DUF1514 family protein | - |
| JYA66_RS07330 (1545719) | 1545719..1545868 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| JYA66_RS07335 (1545865) | 1545865..1546254 | - | 390 | WP_001596346.1 | hypothetical protein | - |
| JYA66_RS07340 (1546244) | 1546244..1546480 | - | 237 | WP_000608281.1 | hypothetical protein | - |
| JYA66_RS13720 (1546620) | 1546620..1546760 | - | 141 | Protein_1451 | DUF1381 domain-containing protein | - |
| JYA66_RS07350 (1546777) | 1546777..1546950 | - | 174 | WP_001209217.1 | hypothetical protein | - |
| JYA66_RS07355 (1546987) | 1546987..1547523 | - | 537 | WP_000185680.1 | dUTPase | - |
| JYA66_RS07360 (1547516) | 1547516..1547764 | - | 249 | WP_001065047.1 | DUF1024 family protein | - |
| JYA66_RS07365 (1547779) | 1547779..1548021 | - | 243 | WP_031871920.1 | SAV1978 family virulence-associated passenger protein | - |
| JYA66_RS07370 (1548025) | 1548025..1548381 | - | 357 | WP_042857171.1 | SA1788 family PVL leukocidin-associated protein | - |
| JYA66_RS07375 (1548509) | 1548509..1548814 | - | 306 | WP_000101252.1 | hypothetical protein | - |
| JYA66_RS07380 (1548815) | 1548815..1549000 | - | 186 | WP_001187243.1 | DUF3113 family protein | - |
| JYA66_RS07385 (1549005) | 1549005..1549409 | - | 405 | WP_031895254.1 | DUF1064 domain-containing protein | - |
| JYA66_RS07390 (1549419) | 1549419..1549629 | - | 211 | Protein_1460 | DUF3269 family protein | - |
| JYA66_RS07395 (1549642) | 1549642..1549803 | - | 162 | WP_000237153.1 | hypothetical protein | - |
| JYA66_RS07400 (1549797) | 1549797..1550577 | - | 781 | Protein_1462 | IS21 family transposase ISRme9 | Transposase |
| JYA66_RS07405 (1550587) | 1550587..1551325 | - | 739 | Protein_1463 | conserved phage C-terminal domain-containing protein | - |
| JYA66_RS13725 (1551390) | 1551390..1551779 | + | 390 | WP_247655135.1 | hypothetical protein | - |
| JYA66_RS13730 (1551751) | 1551751..1552146 | + | 396 | WP_247655136.1 | hypothetical protein | - |
| JYA66_RS07415 (1552228) | 1552228..1552899 | - | 672 | WP_001199428.1 | putative HNHc nuclease | - |
| JYA66_RS07420 (1552912) | 1552912..1553466 | - | 555 | WP_000704712.1 | hypothetical protein | - |
| JYA66_RS07425 (1553497) | 1553497..1554270 | - | 774 | WP_001288247.1 | AAA family ATPase | - |
| JYA66_RS07430 (1554270) | 1554270..1554749 | - | 480 | WP_000002516.1 | siphovirus Gp157 family protein | - |
| JYA66_RS07435 (1554764) | 1554764..1555024 | - | 261 | WP_001804558.1 | DUF1108 family protein | - |
| JYA66_RS07440 (1555005) | 1555005..1555334 | - | 330 | WP_000829611.1 | hypothetical protein | - |
| JYA66_RS07445 (1555427) | 1555427..1555588 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| JYA66_RS07450 (1555600) | 1555600..1555863 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| JYA66_RS13735 (1556013) | 1556013..1556111 | - | 99 | Protein_1474 | hypothetical protein | - |
| JYA66_RS07460 (1556108) | 1556108..1556434 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| JYA66_RS07465 (1556493) | 1556493..1556747 | + | 255 | WP_000801112.1 | hypothetical protein | - |
| JYA66_RS07470 (1556731) | 1556731..1556931 | - | 201 | WP_001156085.1 | hypothetical protein | - |
| JYA66_RS07475 (1556948) | 1556948..1557394 | - | 447 | WP_000435345.1 | hypothetical protein | - |
| JYA66_RS07480 (1557437) | 1557437..1557640 | - | 204 | WP_211020136.1 | DUF739 family protein | - |
| JYA66_RS07485 (1557800) | 1557800..1558570 | + | 771 | WP_001208484.1 | S24 family peptidase | - |
| JYA66_RS07490 (1558640) | 1558640..1558823 | + | 184 | Protein_1481 | hypothetical protein | - |
| JYA66_RS07495 (1558860) | 1558860..1559006 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| JYA66_RS07500 (1559003) | 1559003..1559617 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| JYA66_RS13810 (1559743) | 1559743..1560949 | + | 1207 | Protein_1484 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JYA66_RS07510 (1560992) | 1560992..1562518 | - | 1527 | WP_247655137.1 | hypothetical protein | - |
| JYA66_RS13745 (1562529) | 1562529..1563035 | - | 507 | WP_247655138.1 | hypothetical protein | - |
| JYA66_RS07515 (1563022) | 1563022..1563954 | - | 933 | WP_211020138.1 | DUF1672 domain-containing protein | - |
| JYA66_RS07520 (1564199) | 1564199..1565950 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| JYA66_RS07525 (1565931) | 1565931..1566656 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| JYA66_RS07530 (1566789) | 1566789..1567526 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| JYA66_RS07535 (1567519) | 1567519..1568061 | - | 543 | WP_211020140.1 | SMC-Scp complex subunit ScpB | - |
| JYA66_RS07540 (1568054) | 1568054..1568785 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| JYA66_RS07545 (1568877) | 1568877..1569383 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| JYA66_RS07550 (1569461) | 1569461..1570348 | - | 888 | WP_211020142.1 | Tyrosine recombinase XerD | VF |
| JYA66_RS07555 (1570397) | 1570397..1570846 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| JYA66_RS07560 (1570951) | 1570951..1571493 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| JYA66_RS07565 (1571575) | 1571575..1572483 | + | 909 | WP_001171339.1 | aldo/keto reductase | - |
| JYA66_RS07570 (1572699) | 1572699..1572947 | - | 249 | WP_000995804.1 | hypothetical protein | - |
| JYA66_RS07575 (1572963) | 1572963..1573718 | - | 756 | WP_000678235.1 | SDR family oxidoreductase | - |
| JYA66_RS07580 (1573860) | 1573860..1574672 | + | 813 | WP_000779750.1 | pyrroline-5-carboxylate reductase | - |
| JYA66_RS07585 (1574782) | 1574782..1575702 | - | 921 | WP_000454066.1 | ribonuclease Z | - |
| JYA66_RS07590 (1576015) | 1576015..1577499 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| JYA66_RS07595 (1577729) | 1577729..1578595 | + | 867 | WP_000382586.1 | AraC family transcriptional regulator | - |
| JYA66_RS07600 (1578677) | 1578677..1580326 | - | 1650 | WP_001041928.1 | alpha-glucosidase | - |
| JYA66_RS07605 (1580342) | 1580342..1581361 | - | 1020 | WP_000256320.1 | LacI family DNA-binding transcriptional regulator | - |
| JYA66_RS07610 (1581362) | 1581362..1581616 | - | 255 | WP_001792107.1 | hypothetical protein | - |
| JYA66_RS07615 (1581555) | 1581555..1581926 | - | 372 | WP_000413425.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|