MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 129523 bp
Accession: NZ_CP071075 Location: 1..129523 Organism: Escherichia coli strain 3347558 Replicon: plasmid p3347558_2
Accession: NZ_CP071075 Location: 1..129523 Organism: Escherichia coli strain 3347558 Replicon: plasmid p3347558_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY392_RS25975 (JY392_25970) | 1..978 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| JY392_RS25980 (JY392_25975) | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| JY392_RS25985 (JY392_25980) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| JY392_RS25990 (JY392_25985) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| JY392_RS25995 (JY392_25990) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| JY392_RS26000 (JY392_25995) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| JY392_RS26005 (JY392_26000) | 5504..5928 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| JY392_RS26010 (JY392_26005) | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| JY392_RS26015 (JY392_26010) | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| JY392_RS26020 (JY392_26015) | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| JY392_RS26025 (JY392_26020) | 9717..10499 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| JY392_RS26030 (JY392_26025) | 10496..11518 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| JY392_RS26035 (JY392_26030) | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| JY392_RS26040 (JY392_26035) | 12598..12945 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| JY392_RS26045 (JY392_26040) | 12942..13346 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| JY392_RS26050 (JY392_26045) | 13426..13764 | - | 339 | Protein_15 | IS3 family transposase IS629 | Transposase |
| JY392_RS26055 (JY392_26050) | 13848..15356 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| JY392_RS26060 (JY392_26055) | 16029..16768 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| JY392_RS26065 (JY392_26060) | 16794..17099 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| JY392_RS26070 (JY392_26065) | 17622..18797 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| JY392_RS26075 (JY392_26070) | 18866..21127 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| JY392_RS26080 (JY392_26075) | 21296..22072 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| JY392_RS26085 (JY392_26080) | 22080..22955 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| JY392_RS26090 (JY392_26085) | 23329..23954 | - | 626 | Protein_23 | replication initiation protein | - |
| JY392_RS26095 (JY392_26090) | 25406..25741 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| JY392_RS26100 (JY392_26095) | 25870..26217 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| JY392_RS26105 (JY392_26100) | 26237..26746 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| JY392_RS26110 (JY392_26105) | 26743..27003 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| JY392_RS26115 (JY392_26110) | 27105..27844 | + | 740 | Protein_28 | IS3 family transposase IS629 | Transposase |
| JY392_RS26120 (JY392_26115) | 28517..28831 | + | 315 | Protein_29 | IS5 family transposase ISKpn26 | Transposase |
| JY392_RS26125 (JY392_26120) | 28832..29005 | + | 174 | Protein_30 | IS5 family transposase ISKpn26 | Transposase |
| JY392_RS26130 (JY392_26125) | 29155..29788 | - | 634 | Protein_31 | histidine-type phosphatase | - |
| JY392_RS26135 (JY392_26130) | 29910..30395 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| JY392_RS26140 (JY392_26135) | 30420..30905 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| JY392_RS26145 (JY392_26140) | 30892..31587 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| JY392_RS26150 (JY392_26145) | 31592..32722 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| JY392_RS26155 (JY392_26150) | 32712..33995 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| JY392_RS26160 (JY392_26155) | 33998..35377 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| JY392_RS26165 (JY392_26160) | 35481..36008 | - | 528 | WP_000178050.1 | iron transporter | - |
| JY392_RS26170 (JY392_26165) | 36049..37935 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| JY392_RS26175 (JY392_26170) | 38282..39043 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| JY392_RS26180 (JY392_26175) | 39280..39786 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| JY392_RS26185 (JY392_26180) | 39776..39946 | - | 171 | Protein_42 | DsbA family protein | - |
| JY392_RS26190 (JY392_26185) | 40084..40197 | - | 114 | Protein_43 | IS6 family transposase | - |
| JY392_RS26195 (JY392_26190) | 40397..41094 | + | 698 | WP_151884388.1 | IS1 family transposase IS1X2 | Transposase |
| JY392_RS26200 (JY392_26195) | 41109..42272 | + | 1164 | Protein_45 | IS4 family transposase IS10R | Transposase |
| JY392_RS26205 (JY392_26200) | 42282..42698 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| JY392_RS26210 (JY392_26205) | 42786..43379 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| JY392_RS26215 (JY392_26210) | 43492..44697 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| JY392_RS26220 (JY392_26215) | 44779..45402 | + | 624 | WP_163434155.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| JY392_RS26225 (JY392_26220) | 45380..46066 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| JY392_RS26230 (JY392_26225) | 46074..46460 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| JY392_RS26235 (JY392_26230) | 46453..46716 | - | 264 | WP_049802299.1 | antibiotic biosynthesis monooxygenase | - |
| JY392_RS26245 (JY392_26240) | 47552..47758 | + | 207 | WP_001749967.1 | hypothetical protein | - |
| JY392_RS26250 (JY392_26245) | 47769..48041 | - | 273 | Protein_55 | IS1 family transposase IS1X2 | Transposase |
| JY392_RS26255 (JY392_26250) | 48140..49573 | + | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| JY392_RS26260 (JY392_26255) | 49607..50821 | - | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| JY392_RS26265 (JY392_26260) | 50877..50942 | + | 66 | Protein_58 | EAL domain-containing protein | - |
| JY392_RS26270 (JY392_26265) | 51082..51846 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| JY392_RS28005 | 51964..52029 | - | 66 | Protein_60 | hypothetical protein | Relaxase |
| JY392_RS28010 | 52139..52255 | - | 117 | Protein_61 | hypothetical protein | Relaxase |
| JY392_RS26280 (JY392_26275) | 52476..52949 | - | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| JY392_RS26285 (JY392_26280) | 53105..53770 | + | 666 | Protein_63 | IS91 family transposase ISAzo26 | Transposase |
| JY392_RS26290 (JY392_26285) | 53833..54597 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| JY392_RS26295 (JY392_26290) | 55090..55674 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| JY392_RS26300 (JY392_26295) | 55674..56912 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| JY392_RS26305 (JY392_26300) | 56909..57814 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| JY392_RS26310 (JY392_26305) | 57936..58640 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY392_RS26315 (JY392_26310) | 58617..59777 | + | 1161 | WP_072256398.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| JY392_RS26320 (JY392_26315) | 60070..60531 | - | 462 | WP_000978817.1 | thermonuclease family protein | - |
| JY392_RS26325 (JY392_26320) | 60902..61606 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY392_RS26330 (JY392_26325) | 61658..63424 | + | 1767 | Protein_72 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| JY392_RS26335 (JY392_26330) | 63503..64507 | + | 1005 | WP_000427619.1 | IS110 family transposase IS5075 | Transposase |
| JY392_RS28015 | 64779..64865 | - | 87 | Protein_74 | Arm DNA-binding domain-containing protein | - |
| JY392_RS26345 (JY392_26340) | 65195..66010 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| JY392_RS26350 (JY392_26345) | 66071..66874 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JY392_RS26355 (JY392_26350) | 66874..67710 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| JY392_RS26360 (JY392_26355) | 67817..68221 | - | 405 | Protein_78 | IS91 family transposase ISPps1 | Transposase |
| JY392_RS26365 (JY392_26360) | 68431..69291 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JY392_RS26370 (JY392_26365) | 69474..70031 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JY392_RS26375 (JY392_26370) | 70195..73200 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JY392_RS26380 (JY392_26375) | 73263..73484 | + | 222 | WP_250130633.1 | Ref family recombination enhancement nuclease | - |
| JY392_RS26390 (JY392_26385) | 74811..75185 | + | 375 | WP_061360541.1 | hypothetical protein | - |
| JY392_RS26395 (JY392_26390) | 75365..76966 | + | 1602 | WP_151319964.1 | Polysialic acid transport protein KpsD | VF |
| JY392_RS26400 (JY392_26395) | 77021..77821 | + | 801 | WP_115747250.1 | Polysialic acid transport protein KpsM | VF |
| JY392_RS26405 (JY392_26400) | 77834..78484 | + | 651 | WP_115256632.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| JY392_RS26410 (JY392_26405) | 78499..79701 | + | 1203 | WP_115747247.1 | hypothetical protein | VF |
| JY392_RS26415 (JY392_26410) | 80189..80347 | - | 159 | Protein_89 | IS5 family transposase IS5D | Transposase |
| JY392_RS26420 (JY392_26415) | 80522..81661 | + | 1140 | WP_024250307.1 | ISAs1 family transposase IS1358 | Transposase |
| JY392_RS26425 (JY392_26420) | 81671..82030 | + | 360 | Protein_91 | UTP--glucose-1-phosphate uridylyltransferase | VF |
| JY392_RS26430 (JY392_26425) | 82088..83179 | + | 1092 | WP_115747245.1 | Stealth CR1 domain-containing protein | - |
| JY392_RS26435 (JY392_26430) | 83184..85457 | + | 2274 | WP_223364199.1 | putative glycosyltransferase EpsJ | VF |
| JY392_RS26440 (JY392_26435) | 85500..87188 | + | 1689 | WP_083580898.1 | hypothetical protein | - |
| JY392_RS26445 (JY392_26440) | 87185..87580 | + | 396 | WP_083580896.1 | HAD hydrolase family protein | - |
| JY392_RS26450 (JY392_26445) | 87577..89187 | + | 1611 | WP_083580894.1 | aminoglycoside phosphotransferase family protein | - |
| JY392_RS26455 (JY392_26450) | 89192..89935 | + | 744 | WP_083580892.1 | capsular biosynthesis protein | - |
| JY392_RS26460 (JY392_26455) | 90016..92019 | + | 2004 | WP_083580888.1 | hypothetical protein | VF |
| JY392_RS26465 (JY392_26460) | 92108..93355 | + | 1248 | WP_083580886.1 | hypothetical protein | VF |
| JY392_RS26470 (JY392_26465) | 93560..94024 | + | 465 | Protein_100 | HTH domain-containing protein | - |
| JY392_RS26475 (JY392_26470) | 94219..94916 | + | 698 | WP_094096600.1 | IS1 family transposase IS1G | Transposase |
| JY392_RS26480 (JY392_26475) | 94938..95654 | - | 717 | Protein_102 | N-6 DNA methylase | - |
| JY392_RS26485 (JY392_26480) | 95840..97549 | + | 1710 | WP_083580924.1 | phage portal protein | - |
| JY392_RS26490 (JY392_26485) | 97635..97868 | + | 234 | Protein_104 | phage antirepressor KilAC domain-containing protein | - |
| JY392_RS26495 (JY392_26490) | 97898..98743 | + | 846 | WP_083580922.1 | Replication protein repL | - |
| JY392_RS26500 (JY392_26495) | 99078..99233 | + | 156 | WP_001352007.1 | type I toxin-antitoxin system toxin HokD | - |
| JY392_RS26505 (JY392_26500) | 99427..100539 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| JY392_RS26510 (JY392_26505) | 100699..101208 | - | 510 | WP_000509939.1 | hypothetical protein | - |
| JY392_RS26515 (JY392_26510) | 101220..101684 | - | 465 | WP_223364192.1 | hypothetical protein | - |
| JY392_RS26520 (JY392_26515) | 101837..102652 | - | 816 | WP_083580918.1 | hypothetical protein | - |
| JY392_RS26525 (JY392_26520) | 102662..104251 | - | 1590 | WP_083580915.1 | hypothetical protein | - |
| JY392_RS26530 (JY392_26525) | 104312..106018 | - | 1707 | Protein_112 | hypothetical protein | - |
| JY392_RS26535 (JY392_26530) | 106284..107249 | - | 966 | WP_000725192.1 | ParB family protein | - |
| JY392_RS26540 (JY392_26535) | 107246..108451 | - | 1206 | WP_083580913.1 | Plasmid partition protein A | VF |
| JY392_RS26545 (JY392_26540) | 108697..109557 | - | 861 | WP_083580911.1 | replication protein RepA | - |
| JY392_RS26550 (JY392_26545) | 109792..109995 | + | 204 | WP_212541318.1 | hypothetical protein | - |
| JY392_RS26555 (JY392_26550) | 109989..110530 | - | 542 | Protein_117 | IS1 family transposase | - |
| JY392_RS26560 (JY392_26555) | 111063..111818 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| JY392_RS26565 (JY392_26560) | 112088..112433 | + | 346 | Protein_119 | IS1 family transposase IS1X2 | Transposase |
| JY392_RS26570 (JY392_26565) | 112698..113447 | - | 750 | Protein_120 | IS110 family transposase IS1663 | Transposase |
| JY392_RS26575 (JY392_26570) | 113672..114057 | + | 386 | Protein_121 | IS5 family transposase ISPa52 | Transposase |
| JY392_RS26580 (JY392_26575) | 114282..115433 | - | 1152 | WP_083580909.1 | Putative serine protease HhoB | VF |
| JY392_RS26585 (JY392_26580) | 115458..116423 | - | 966 | WP_000196691.1 | zinc metalloprotease HtpX | - |
| JY392_RS26590 (JY392_26585) | 116401..116898 | - | 498 | WP_001514138.1 | heat resistance protein PsiE-GI | - |
| JY392_RS26595 (JY392_26590) | 116901..118610 | - | 1710 | WP_023326110.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| JY392_RS26600 (JY392_26595) | 118614..119054 | - | 441 | WP_000786815.1 | heat resistance system thioredoxin Trx-GI | - |
| JY392_RS26605 (JY392_26600) | 119044..119481 | - | 438 | Protein_127 | hypothetical protein | - |
| JY392_RS26615 (JY392_26610) | 120245..120448 | - | 204 | Protein_129 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| JY392_RS26620 (JY392_26615) | 120631..120852 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JY392_RS26625 (JY392_26620) | 120852..121232 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| JY392_RS26630 (JY392_26625) | 121237..121416 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| JY392_RS26635 (JY392_26630) | 121444..121722 | + | 279 | Protein_133 | pdcB | - |
| JY392_RS26640 (JY392_26635) | 121727..122140 | + | 414 | Protein_134 | IS3 family transposase ISLad1 | Transposase |
| JY392_RS26645 (JY392_26640) | 122090..122425 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| JY392_RS26650 (JY392_26645) | 122635..123615 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| JY392_RS26655 (JY392_26650) | 123859..125262 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| JY392_RS26660 (JY392_26655) | 125249..126181 | + | 933 | WP_023143441.1 | homocysteine S-methyltransferase | - |
| JY392_RS26665 (JY392_26660) | 126290..126619 | - | 330 | Protein_139 | TOBE domain-containing protein | - |
| JY392_RS28020 | 127480..127638 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| JY392_RS26680 (JY392_26675) | 127797..128768 | - | 972 | Protein_142 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|