NZ_CP0710741..169082

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 169082 bp
Accession: NZ_CP071074        Location: 1..169082         Organism: Escherichia coli strain 3347558       Replicon: plasmid p3347558_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JY392_RS24995 (JY392_24990) 1..1101 + 1101 WP_001348532.1 RepB family plasmid replication initiator protein -
JY392_RS25000 (JY392_24995) 2138..2572 - 435 WP_004201092.1 hypothetical protein -
JY392_RS25005 (JY392_25000) 2590..3705 - 1116 WP_000946104.1 phosphoadenosine phosphosulfate reductase family protein -
JY392_RS25010 (JY392_25005) 3973..4581 + 609 WP_000849069.1 hypothetical protein -
JY392_RS25015 (JY392_25010) 4586..5107 + 522 WP_000393783.1 hypothetical protein -
JY392_RS25020 (JY392_25015) 5110..5631 + 522 WP_000648873.1 hypothetical protein -
JY392_RS25025 (JY392_25020) 5728..6201 + 474 WP_000057876.1 hypothetical protein -
JY392_RS25030 (JY392_25025) 6212..6505 + 294 WP_001370730.1 hypothetical protein -
JY392_RS25035 (JY392_25030) 6510..7364 + 855 WP_000539391.1 hypothetical protein -
JY392_RS25040 (JY392_25035) 7364..8323 + 960 WP_000829617.1 S49 family peptidase -
JY392_RS25045 (JY392_25040) 8339..9199 + 861 WP_000139696.1 DsbA family protein -
JY392_RS25050 (JY392_25045) 9233..9661 + 429 WP_000591076.1 hypothetical protein -
JY392_RS25055 (JY392_25050) 9719..10078 + 360 WP_000422769.1 hypothetical protein -
JY392_RS25060 (JY392_25055) 10078..10524 + 447 WP_000919343.1 hypothetical protein -
JY392_RS25065 (JY392_25060) 10521..11039 + 519 WP_000210757.1 nitrite reductase -
JY392_RS25070 (JY392_25065) 11039..11269 + 231 WP_000972665.1 hypothetical protein -
JY392_RS25075 (JY392_25070) 11256..12113 + 858 WP_001167036.1 hypothetical protein -
JY392_RS27990 12139..12330 + 192 WP_001270409.1 hypothetical protein -
JY392_RS25085 (JY392_25080) 12333..12860 + 528 WP_004201083.1 thermonuclease family protein -
JY392_RS25090 (JY392_25085) 12918..13190 + 273 WP_001043046.1 HU family DNA-binding protein -
JY392_RS25095 (JY392_25090) 13279..13572 + 294 WP_001239998.1 hypothetical protein -
JY392_RS25100 (JY392_25095) 13599..13901 - 303 WP_000124640.1 XRE family transcriptional regulator Antitoxin Detail
JY392_RS25105 (JY392_25100) 13906..14256 - 351 WP_000270043.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
JY392_RS25110 (JY392_25105) 14419..14967 + 549 WP_001061573.1 hypothetical protein -
JY392_RS25115 (JY392_25110) 15308..15502 + 195 WP_000343597.1 hypothetical protein -
JY392_RS25120 (JY392_25115) 15513..15884 + 372 WP_000516918.1 hypothetical protein -
JY392_RS25125 (JY392_25120) 15877..16347 + 471 WP_001281821.1 hypothetical protein -
JY392_RS25130 (JY392_25125) 16362..16697 - 336 WP_000683477.1 hypothetical protein -
JY392_RS25135 (JY392_25130) 16794..17282 + 489 WP_001273096.1 DUF1643 domain-containing protein -
JY392_RS25140 (JY392_25135) 17285..17782 + 498 WP_000062185.1 hypothetical protein -
JY392_RS25145 (JY392_25140) 18344..19276 + 933 WP_000434070.1 hypothetical protein -
JY392_RS25150 (JY392_25145) 19350..20813 + 1464 WP_004201081.1 AAA family ATPase -
JY392_RS25155 (JY392_25150) 20875..21267 + 393 WP_000018404.1 hypothetical protein -
JY392_RS25160 (JY392_25155) 21316..21510 + 195 WP_000757530.1 DUF2997 domain-containing protein -
JY392_RS25165 (JY392_25160) 21555..22688 + 1134 WP_223369384.1 hypothetical protein -
JY392_RS25170 (JY392_25165) 22700..23047 + 348 WP_000039129.1 hypothetical protein -
JY392_RS25175 (JY392_25170) 23044..23472 + 429 WP_000988988.1 hypothetical protein -
JY392_RS25180 (JY392_25175) 23465..24028 + 564 WP_000004671.1 hypothetical protein -
JY392_RS25185 (JY392_25180) 24040..24609 + 570 WP_001256126.1 hypothetical protein -
JY392_RS25190 (JY392_25185) 24612..25157 + 546 WP_000435225.1 hypothetical protein -
JY392_RS25195 (JY392_25190) 25274..26212 + 939 WP_000268394.1 chromosome partitioning protein ParB -
JY392_RS25200 (JY392_25195) 26212..26409 + 198 WP_000532167.1 hypothetical protein -
JY392_RS25205 (JY392_25200) 26647..26889 + 243 WP_001096360.1 hypothetical protein -
JY392_RS25210 (JY392_25205) 26892..27254 + 363 WP_001258026.1 hypothetical protein -
JY392_RS25215 (JY392_25210) 27247..28491 + 1245 WP_000098294.1 site-specific DNA-methyltransferase -
JY392_RS25220 (JY392_25215) 28505..28954 + 450 WP_001053910.1 hypothetical protein -
JY392_RS25225 (JY392_25220) 28936..29247 + 312 WP_000380893.1 hypothetical protein -
JY392_RS25230 (JY392_25225) 29421..30206 + 786 WP_001151305.1 Sporulation initiation inhibitor protein Soj VF
JY392_RS25235 (JY392_25230) 30210..31391 + 1182 WP_001207227.1 KorB domain-containing protein -
JY392_RS25240 (JY392_25235) 31440..31712 + 273 WP_000703827.1 helix-turn-helix domain-containing protein -
JY392_RS25245 (JY392_25240) 31765..32400 - 636 WP_000074431.1 N-6 DNA methylase -
JY392_RS25250 (JY392_25245) 32492..32635 - 144 WP_000939033.1 hypothetical protein -
JY392_RS25255 (JY392_25250) 32962..33339 + 378 WP_001125904.1 hypothetical protein -
JY392_RS25260 (JY392_25255) 33332..33613 + 282 WP_000044823.1 hypothetical protein -
JY392_RS25265 (JY392_25260) 33588..34262 + 675 WP_000344149.1 hypothetical protein -
JY392_RS25270 (JY392_25265) 34255..34761 + 507 WP_000566443.1 hypothetical protein -
JY392_RS25275 (JY392_25270) 34767..35078 + 312 WP_002210541.1 hypothetical protein -
JY392_RS25280 (JY392_25275) 35087..35587 + 501 WP_000647188.1 hypothetical protein -
JY392_RS25285 (JY392_25280) 35591..37018 + 1428 WP_000936897.1 DNA cytosine methyltransferase -
JY392_RS25290 (JY392_25285) 37018..37674 + 657 WP_000268552.1 hypothetical protein -
JY392_RS25295 (JY392_25290) 37730..38347 + 618 WP_000464630.1 hypothetical protein -
JY392_RS25300 (JY392_25295) 38580..38858 + 279 WP_000746034.1 hypothetical protein -
JY392_RS25305 (JY392_25300) 38949..39437 - 489 WP_004201072.1 hypothetical protein -
JY392_RS25310 (JY392_25305) 39452..41644 - 2193 WP_000366823.1 DNA topoisomerase 3 -
JY392_RS25315 (JY392_25310) 41644..41877 - 234 WP_001191890.1 hypothetical protein -
JY392_RS25320 (JY392_25315) 41859..42476 - 618 WP_001249395.1 hypothetical protein -
JY392_RS25325 (JY392_25320) 42644..45616 + 2973 WP_001326173.1 hypothetical protein Relaxase
JY392_RS25330 (JY392_25325) 45613..47478 + 1866 WP_000178857.1 conjugative transfer system coupling protein TraD -
JY392_RS25335 (JY392_25330) 47528..48073 + 546 WP_000228720.1 hypothetical protein -
JY392_RS25340 (JY392_25335) 48030..48659 + 630 WP_000743449.1 DUF4400 domain-containing protein -
JY392_RS25345 (JY392_25340) 48669..49115 + 447 WP_000122507.1 hypothetical protein -
JY392_RS25350 (JY392_25345) 49125..49502 + 378 WP_000869297.1 hypothetical protein -
JY392_RS25355 (JY392_25350) 49502..50164 + 663 WP_001231464.1 hypothetical protein -
JY392_RS25360 (JY392_25355) 50345..50488 + 144 WP_001275801.1 hypothetical protein -
JY392_RS25365 (JY392_25360) 50500..50865 + 366 WP_001052530.1 hypothetical protein -
JY392_RS25370 (JY392_25365) 51010..51291 + 282 WP_000805625.1 type IV conjugative transfer system protein TraL -
JY392_RS25375 (JY392_25370) 51288..51914 + 627 WP_001049717.1 TraE/TraK family type IV conjugative transfer system protein -
JY392_RS25380 (JY392_25375) 51898..52815 + 918 WP_000794249.1 type-F conjugative transfer system secretin TraK -
JY392_RS25385 (JY392_25380) 52815..54128 + 1314 WP_024131605.1 TraB/VirB10 family protein -
JY392_RS25390 (JY392_25385) 54125..54703 + 579 WP_000793435.1 type IV conjugative transfer system lipoprotein TraV -
JY392_RS25395 (JY392_25390) 54707..55099 + 393 WP_000479535.1 TraA family conjugative transfer protein -
JY392_RS25400 (JY392_25395) 55384..56646 + 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
JY392_RS25405 (JY392_25400) 56970..58115 + 1146 WP_015056382.1 Beta-lactamase ARG
JY392_RS25410 (JY392_25405) 58209..58742 + 534 WP_001221666.1 lipocalin family protein -
JY392_RS25415 (JY392_25410) 58739..59056 - 318 WP_000118520.1 quaternary ammonium compound efflux SMR transporter SugE -
JY392_RS25420 (JY392_25415) 59784..65270 + 5487 WP_000606835.1 Ig-like domain-containing protein -
JY392_RS25425 (JY392_25420) 65419..66126 + 708 WP_001259346.1 DsbC family protein -
JY392_RS25430 (JY392_25425) 66123..68570 + 2448 WP_000637384.1 type IV secretion system protein TraC -
JY392_RS25435 (JY392_25430) 68585..68902 + 318 WP_000351984.1 hypothetical protein -
JY392_RS25440 (JY392_25435) 68899..69429 + 531 WP_001010740.1 S26 family signal peptidase -
JY392_RS25445 (JY392_25440) 69392..70657 + 1266 WP_001447719.1 TrbC family F-type conjugative pilus assembly protein -
JY392_RS25450 (JY392_25445) 70654..71325 + 672 WP_000575345.1 EAL domain-containing protein -
JY392_RS25455 (JY392_25450) 71325..72329 + 1005 WP_005507569.1 TraU family protein -
JY392_RS25460 (JY392_25455) 72445..75240 + 2796 WP_001256484.1 conjugal transfer mating pair stabilization protein TraN -
JY392_RS25465 (JY392_25460) 75279..76139 - 861 WP_000709517.1 hypothetical protein -
JY392_RS25470 (JY392_25465) 76262..76903 - 642 WP_000796664.1 hypothetical protein -
JY392_RS25475 (JY392_25470) 77198..77518 + 321 WP_000547566.1 hypothetical protein -
JY392_RS25480 (JY392_25475) 77822..78007 + 186 WP_001186917.1 hypothetical protein -
JY392_RS25485 (JY392_25480) 78227..79195 + 969 WP_000085160.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
JY392_RS25490 (JY392_25485) 79206..80114 + 909 WP_000739139.1 hypothetical protein -
JY392_RS25495 (JY392_25490) 80175..80705 + 531 WP_000987165.1 single-stranded DNA-binding protein -
JY392_RS25500 (JY392_25495) 80800..81789 + 990 WP_001282585.1 phage recombination protein Bet -
JY392_RS25505 (JY392_25500) 81852..82862 + 1011 WP_000706865.1 YqaJ viral recombinase family protein -
JY392_RS25510 (JY392_25505) 83062..84339 + 1278 WP_000170087.1 DUF3150 domain-containing protein -
JY392_RS25515 (JY392_25510) 84424..86220 + 1797 WP_000039319.1 VWA domain-containing protein -
JY392_RS25520 (JY392_25515) 86282..86617 + 336 WP_001447572.1 hypothetical protein -
JY392_RS25525 (JY392_25520) 86882..87421 + 540 WP_000018872.1 hypothetical protein -
JY392_RS25530 (JY392_25525) 87512..88012 + 501 WP_000793769.1 hypothetical protein -
JY392_RS25535 (JY392_25530) 88086..88970 + 885 WP_000477209.1 hypothetical protein -
JY392_RS25540 (JY392_25535) 89036..89260 + 225 WP_001102700.1 class I ribonucleotide reductase maintenance protein YfaE -
JY392_RS25545 (JY392_25540) 89322..89711 + 390 WP_000026577.1 hypothetical protein -
JY392_RS27995 89875..90153 + 279 WP_015059622.1 hypothetical protein -
JY392_RS25555 (JY392_25550) 90231..90473 - 243 WP_002210529.1 hypothetical protein -
JY392_RS25560 (JY392_25555) 90491..90682 + 192 WP_000651508.1 hypothetical protein -
JY392_RS25565 (JY392_25560) 90751..91104 + 354 WP_000994741.1 hypothetical protein -
JY392_RS25570 (JY392_25565) 91296..91640 + 345 WP_000209093.1 hypothetical protein -
JY392_RS25575 (JY392_25570) 91718..92020 + 303 WP_000410925.1 hypothetical protein -
JY392_RS25580 (JY392_25575) 92098..93723 + 1626 WP_000201432.1 DNA cytosine methyltransferase -
JY392_RS25585 (JY392_25580) 93784..94215 + 432 WP_000687894.1 hypothetical protein -
JY392_RS25590 (JY392_25585) 94289..94843 + 555 WP_001093867.1 hypothetical protein -
JY392_RS25595 (JY392_25590) 95076..95462 + 387 WP_000042274.1 hypothetical protein -
JY392_RS25600 (JY392_25595) 95550..98003 + 2454 WP_001187969.1 phosphoadenosine phosphosulfate reductase -
JY392_RS25605 (JY392_25600) 98205..98408 + 204 WP_000050847.1 hypothetical protein -
JY392_RS25610 (JY392_25605) 98480..99085 + 606 WP_000071870.1 5'-deoxynucleotidase -
JY392_RS25615 (JY392_25610) 99078..99347 + 270 WP_000184110.1 hypothetical protein -
JY392_RS25620 (JY392_25615) 99361..99579 + 219 WP_000260293.1 hypothetical protein -
JY392_RS25625 (JY392_25620) 99653..100210 + 558 WP_000064432.1 hypothetical protein -
JY392_RS25630 (JY392_25625) 100285..100491 + 207 Protein_128 NgrC -
JY392_RS25635 (JY392_25630) 100551..101743 + 1193 WP_085955245.1 IS3 family transposase ISKpn18 Transposase
JY392_RS25640 (JY392_25635) 101786..102442 + 657 Protein_130 NgrC -
JY392_RS25645 (JY392_25640) 102901..103287 + 387 WP_001077336.1 hypothetical protein -
JY392_RS25650 (JY392_25645) 103465..105192 + 1728 WP_000122922.1 toprim domain-containing protein -
JY392_RS25655 (JY392_25650) 105179..105457 + 279 WP_000268337.1 hypothetical protein -
JY392_RS25660 (JY392_25655) 105530..105751 + 222 WP_000714163.1 hypothetical protein -
JY392_RS25665 (JY392_25660) 105933..106937 - 1005 WP_020442388.1 IS110 family transposase IS4321R Transposase
JY392_RS25670 (JY392_25665) 107016..109988 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
JY392_RS25675 (JY392_25670) 109991..110548 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
JY392_RS25680 (JY392_25675) 110854..111867 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
JY392_RS25685 (JY392_25680) 112023..112496 + 474 WP_004201280.1 Dihydrofolate reductase type 1 ARG
JY392_RS25690 (JY392_25685) 112607..113059 + 453 WP_000237816.1 hypothetical protein ARG
JY392_RS25695 (JY392_25690) 113206..113910 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
JY392_RS25700 (JY392_25695) 114208..115467 + 1260 WP_012300772.1 Bicyclomycin resistance protein ARG
JY392_RS25705 (JY392_25700) 115732..116532 + 801 WP_000846390.1 Beta-lactamase OXA-10 ARG
JY392_RS25710 (JY392_25705) 116549..117387 + 839 Protein_144 Streptomycin 3''-adenylyltransferase ARG
JY392_RS25715 (JY392_25710) 117504..117851 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
JY392_RS25720 (JY392_25715) 117845..118684 + 840 WP_000259031.1 Dihydropteroate synthase ARG
JY392_RS25725 (JY392_25720) 119089..120630 + 1542 WP_000050481.1 IS91 family transposase ISVsa3 Transposase
JY392_RS25730 (JY392_25725) 120863..121015 + 153 Protein_148 integrase core domain-containing protein -
JY392_RS25735 (JY392_25730) 121121..121900 + 780 WP_014386410.1 Aminoglycoside 3'-phosphotransferase ARG
JY392_RS25740 (JY392_25735) 122109..123077 + 969 WP_005804963.1 IS30 family transposase ISAba125 Transposase
JY392_RS25745 (JY392_25740) 123178..123990 + 813 WP_004201164.1 Metallo-beta-lactamase type 2 ARG
JY392_RS28000 123994..124296 + 303 WP_060560601.1 bleomycin resistance protein -
JY392_RS25755 (JY392_25750) 124290..125129 + 840 WP_000259031.1 Dihydropteroate synthase ARG
JY392_RS25760 (JY392_25755) 125534..127075 + 1542 WP_000050481.1 IS91 family transposase ISVsa3 Transposase
JY392_RS25765 (JY392_25760) 127309..128148 + 840 Protein_155 IS5 family transposase ISEc35 Transposase
JY392_RS25770 (JY392_25765) 128474..129247 + 774 WP_000359986.1 16S rRNA (guanine(1405)-N(7))-methyltransferase ARG
JY392_RS25780 (JY392_25775) 129729..129914 - 186 WP_002026779.1 hypothetical protein -
JY392_RS25785 (JY392_25780) 129963..131147 + 1185 WP_002001451.1 IS4 family transposase ISEc29 Transposase
JY392_RS25790 (JY392_25785) 131546..133021 + 1476 WP_000052512.1 putative ABC transporter ATP-binding protein YbiT ARG
JY392_RS25795 (JY392_25790) 133077..133961 + 885 WP_000155092.1 hypothetical protein ARG
JY392_RS25800 (JY392_25795) 134320..134862 - 543 WP_004896925.1 plasmid replication DNA-binding protein -
JY392_RS25805 (JY392_25800) 134929..135681 - 753 Protein_162 replication initiation protein RepM -
JY392_RS25810 (JY392_25805) 135747..136451 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
JY392_RS25815 (JY392_25810) 136504..139125 + 2622 Protein_164 Tn3 family transposase TnpA_Tn3 Transposase
JY392_RS25820 (JY392_25815) 139159..139248 - 90 Protein_165 mercuric transporter MerT family protein -
JY392_RS25825 (JY392_25820) 139320..139754 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
JY392_RS25830 (JY392_25825) 139833..140837 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
JY392_RS25835 (JY392_25830) 141114..141233 + 120 Protein_168 permease -
JY392_RS25840 (JY392_25835) 141243..141359 + 117 WP_000338626.1 hypothetical protein -
JY392_RS25845 (JY392_25840) 141480..141854 + 375 WP_000868820.1 hypothetical protein -
JY392_RS25850 (JY392_25845) 141968..142693 + 726 WP_000988731.1 hypothetical protein -
JY392_RS25855 (JY392_25850) 142934..147079 + 4146 WP_011872905.1 RHS repeat-associated core domain-containing protein -
JY392_RS25860 (JY392_25855) 147069..147491 + 423 WP_001165345.1 hypothetical protein -
JY392_RS25865 (JY392_25860) 147662..148114 + 453 WP_000791469.1 hypothetical protein -
JY392_RS25870 (JY392_25865) 148130..148732 - 603 WP_000278322.1 hypothetical protein -
JY392_RS25875 (JY392_25870) 149010..149291 + 282 WP_000575657.1 hypothetical protein -
JY392_RS25880 (JY392_25875) 149590..150126 + 537 WP_000949433.1 hypothetical protein -
JY392_RS25885 (JY392_25880) 150129..151139 + 1011 WP_000543934.1 IS91 family transposase ISWz1 Transposase
JY392_RS25890 (JY392_25885) 151144..152013 + 870 WP_000997323.1 3'-5' exonuclease -
JY392_RS25895 (JY392_25890) 152010..152501 + 492 WP_000139717.1 hypothetical protein -
JY392_RS25900 (JY392_25895) 152818..153693 + 876 WP_001097010.1 DNA replication terminus site-binding protein -
JY392_RS25905 (JY392_25900) 153855..154895 + 1041 WP_000101568.1 DNA-binding protein -
JY392_RS25910 (JY392_25905) 155182..156693 + 1512 WP_000811656.1 UvrD-helicase domain-containing protein -
JY392_RS25915 (JY392_25910) 156804..157844 + 1041 WP_001326396.1 conjugal transfer protein TraF -
JY392_RS25920 (JY392_25915) 157846..159279 + 1434 WP_000256129.1 conjugal transfer protein TraH -
JY392_RS25925 (JY392_25920) 159292..162906 + 3615 WP_000534551.1 conjugal transfer protein TraG N-terminal domain-containing protein -
JY392_RS25930 (JY392_25925) 162944..163306 - 363 WP_000683483.1 hypothetical protein -
JY392_RS25935 (JY392_25930) 164022..164294 + 273 WP_000356489.1 helix-turn-helix domain-containing protein -
JY392_RS25940 (JY392_25935) 164294..164827 + 534 WP_000790610.1 transglycosylase SLT domain-containing protein -
JY392_RS25945 (JY392_25940) 164838..165446 + 609 WP_000891157.1 hypothetical protein -
JY392_RS25950 (JY392_25945) 165443..165994 + 552 WP_001020646.1 FlhC family transcriptional regulator -
JY392_RS25955 (JY392_25950) 166054..166473 - 420 WP_000651490.1 H-NS family nucleoid-associated regulatory protein -
JY392_RS25960 (JY392_25955) 166475..166768 - 294 WP_000919078.1 hypothetical protein -
JY392_RS25965 (JY392_25960) 166785..167768 - 984 WP_000077457.1 ParM/StbA family protein -
JY392_RS25970 (JY392_25965) 168267..168806 + 540 WP_001447712.1 conjugative transfer protein MobI(A/C) -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance