MGE detailed information
MGE type: Genomic_island MGE length: 10042 bp
Accession: NZ_CP071073 Location: 4288705..4298746 Organism: Escherichia coli strain 3347558 Replicon: chromosome
Accession: NZ_CP071073 Location: 4288705..4298746 Organism: Escherichia coli strain 3347558 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY392_RS20780 (4283903) | 4283903..4285111 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| JY392_RS20785 (4285137) | 4285137..4286468 | - | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| JY392_RS20790 (4286490) | 4286490..4287479 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JY392_RS20795 (4287578) | 4287578..4288516 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JY392_RS20800 (4288831) | 4288831..4289049 | + | 219 | WP_001309776.1 | transcriptional activator TdcR | - |
| JY392_RS20805 (4289305) | 4289305..4289844 | + | 540 | WP_000675750.1 | protein YhaB | - |
| JY392_RS20810 (4289866) | 4289866..4291053 | + | 1188 | WP_000075589.1 | YhaC family protein | - |
| JY392_RS20820 (4291570) | 4291570..4292715 | - | 1146 | WP_001309778.1 | glycerate 2-kinase | - |
| JY392_RS20825 (4292812) | 4292812..4293702 | - | 891 | WP_001377077.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JY392_RS20830 (4293732) | 4293732..4294502 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JY392_RS20835 (4294518) | 4294518..4295852 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JY392_RS20840 (4296227) | 4296227..4297798 | + | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| JY392_RS20845 (4297947) | 4297947..4298282 | + | 336 | WP_001309780.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JY392_RS20850 (4298282) | 4298282..4298746 | + | 465 | WP_000347269.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JY392_RS20855 (4298801) | 4298801..4299610 | - | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| JY392_RS20860 (4299859) | 4299859..4301139 | + | 1281 | WP_000681943.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JY392_RS20865 (4301162) | 4301162..4301635 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JY392_RS20870 (4301646) | 4301646..4302425 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| JY392_RS20875 (4302415) | 4302415..4303293 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| JY392_RS20880 (4303311) | 4303311..4303745 | + | 435 | WP_000948818.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|