MGE detailed information
MGE type: Prophage MGE length: 39898 bp
Accession: NZ_CP071073 Location: 2775899..2815796 Organism: Escherichia coli strain 3347558 Replicon: chromosome
Accession: NZ_CP071073 Location: 2775899..2815796 Organism: Escherichia coli strain 3347558 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY392_RS13605 () | 2771755..2772555 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| JY392_RS13610 () | 2772568..2773419 | + | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JY392_RS13615 () | 2773474..2773932 | + | 459 | WP_000156255.1 | DUF986 family protein | - |
| JY392_RS13620 () | 2774361..2774927 | + | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JY392_RS13625 () | 2774924..2775733 | - | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JY392_RS13630 () | 2775899..2776108 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JY392_RS13635 () | 2776121..2776264 | - | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| JY392_RS13640 () | 2776934..2777221 | - | 288 | WP_001006866.1 | YebO family protein | - |
| JY392_RS13645 () | 2777296..2777439 | - | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JY392_RS13650 () | 2777598..2777836 | + | 239 | Protein_2697 | YobH family protein | - |
| JY392_RS13655 () | 2777980..2778771 | - | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JY392_RS13660 () | 2778948..2780321 | + | 1374 | WP_001309553.1 | MFS transporter | - |
| JY392_RS13665 () | 2780367..2781248 | - | 882 | WP_000984517.1 | protease HtpX | - |
| JY392_RS13670 () | 2781440..2783488 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JY392_RS13675 () | 2783508..2784206 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JY392_RS13680 () | 2784303..2784800 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| JY392_RS13685 () | 2784930..2786213 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| JY392_RS13690 () | 2786182..2788815 | + | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JY392_RS13695 () | 2788895..2790334 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JY392_RS13700 () | 2790452..2790688 | + | 237 | WP_001295499.1 | YebV family protein | - |
| JY392_RS13705 () | 2790793..2790984 | + | 192 | WP_001296140.1 | YebW family protein | - |
| JY392_RS13710 () | 2790985..2791641 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - | 2791738..2792009 | + | 272 | - | - | Antitoxin Detail |
| - | 2791776..2791879 | - | 104 | - | - | Toxin Detail |
| JY392_RS13715 () | 2792037..2792378 | - | 342 | WP_000976481.1 | YebY family protein | - |
| JY392_RS13720 () | 2792391..2793263 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| JY392_RS13725 () | 2793267..2793641 | - | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| JY392_RS13730 () | 2793780..2794010 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JY392_RS13735 () | 2794112..2794768 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| JY392_RS13740 () | 2794792..2795454 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JY392_RS13745 () | 2795451..2797511 | - | 2061 | WP_000936971.1 | oligopeptidase B | - |
| JY392_RS13750 () | 2797668..2798093 | - | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JY392_RS13755 () | 2798150..2799319 | + | 1170 | WP_000942660.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JY392_RS13760 () | 2799483..2800142 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| JY392_RS13765 () | 2800469..2800825 | - | 357 | WP_001295500.1 | protein YebF | - |
| JY392_RS13770 () | 2800892..2801182 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JY392_RS13775 () | 2801316..2802494 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JY392_RS13780 () | 2802549..2803190 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JY392_RS13785 () | 2803227..2805038 | - | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JY392_RS13790 () | 2805273..2806748 | - | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JY392_RS13795 () | 2807086..2807955 | + | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| JY392_RS13800 () | 2808083..2809525 | + | 1443 | WP_000091148.1 | pyruvate kinase | - |
| JY392_RS13805 () | 2809657..2810628 | - | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JY392_RS13810 () | 2810748..2812070 | - | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JY392_RS13815 () | 2812086..2813018 | - | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JY392_RS13820 () | 2813097..2813852 | + | 756 | WP_000202988.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JY392_RS13825 () | 2813849..2814634 | + | 786 | WP_000571478.1 | hypothetical protein | VF |
| JY392_RS13830 () | 2814786..2815796 | - | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JY392_RS13835 () | 2815805..2816416 | - | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JY392_RS13840 () | 2816555..2816620 | - | 66 | WP_072123646.1 | stress response small protein YobI | - |
| JY392_RS13845 () | 2816691..2817293 | + | 603 | WP_001024936.1 | YebB family permuted papain-like enzyme | - |
| JY392_RS13850 () | 2817295..2817816 | - | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JY392_RS13855 () | 2817851..2818591 | - | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JY392_RS13860 () | 2818620..2819072 | - | 453 | WP_076611058.1 | dihydroneopterin triphosphate diphosphatase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|