MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 44104 bp
Accession: NZ_CP071072 Location: 1..44104 Organism: Citrobacter sedlakii strain 3347689II Replicon: plasmid p3347089II_2
Accession: NZ_CP071072 Location: 1..44104 Organism: Citrobacter sedlakii strain 3347689II Replicon: plasmid p3347089II_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JY391_RS23445 (JY391_23445) | 598..1302 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JY391_RS23450 (JY391_23450) | 1357..1548 | - | 192 | Protein_2 | PAS domain-containing protein | - |
| JY391_RS23455 (JY391_23455) | 1601..2305 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY391_RS23460 (JY391_23460) | 2633..2902 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| JY391_RS23465 (JY391_23465) | 3079..3945 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| JY391_RS23470 (JY391_23470) | 4475..4579 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| JY391_RS23475 (JY391_23475) | 4708..4965 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| JY391_RS23480 (JY391_23480) | 5023..5799 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| JY391_RS23485 (JY391_23485) | 5796..6539 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| JY391_RS23490 (JY391_23490) | 6590..6940 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| JY391_RS23495 (JY391_23495) | 7514..7744 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| JY391_RS23500 (JY391_23500) | 7741..8157 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JY391_RS23505 (JY391_23505) | 8361..9217 | + | 857 | Protein_13 | IS3 family transposase ISEc15 | Transposase |
| JY391_RS23510 (JY391_23510) | 9499..10575 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| JY391_RS23515 (JY391_23515) | 10595..10696 | - | 102 | Protein_15 | Tn3 family transposase | - |
| JY391_RS23520 (JY391_23520) | 11216..11299 | + | 84 | Protein_16 | SOS response-associated peptidase | - |
| JY391_RS23875 | 11357..11428 | - | 72 | Protein_17 | hypothetical protein | - |
| JY391_RS23525 (JY391_23525) | 11462..12649 | - | 1188 | Protein_18 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| JY391_RS23530 (JY391_23530) | 12861..13565 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY391_RS23535 (JY391_23535) | 13776..14981 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| JY391_RS23540 (JY391_23540) | 14981..15955 | + | 975 | WP_000064119.1 | ParB family protein | - |
| JY391_RS23545 (JY391_23545) | 16037..17308 | - | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| JY391_RS23550 (JY391_23550) | 17308..17739 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JY391_RS23555 (JY391_23555) | 18145..19632 | + | 1488 | Protein_24 | group II intron reverse transcriptase/maturase | - |
| JY391_RS23560 (JY391_23560) | 19784..20481 | + | 698 | WP_223229472.1 | IS1-like element IS1X3 family transposase | - |
| JY391_RS23565 (JY391_23565) | 20491..20799 | + | 309 | Protein_26 | replication initiation protein | - |
| JY391_RS23570 (JY391_23570) | 22436..23140 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY391_RS23575 (JY391_23575) | 23202..23282 | - | 81 | Protein_28 | SMR family transporter | - |
| JY391_RS23580 (JY391_23580) | 23399..24237 | - | 839 | Protein_29 | Streptomycin 3''-adenylyltransferase | ARG |
| JY391_RS23585 (JY391_23585) | 24330..24803 | - | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| JY391_RS23590 (JY391_23590) | 24960..25972 | + | 1013 | Protein_31 | IS91 family transposase ISAzo26 | Transposase |
| JY391_RS23595 (JY391_23595) | 26319..26885 | - | 567 | WP_003159185.1 | Tn3 family transposase ISPsy42 | Transposase |
| JY391_RS23600 (JY391_23600) | 27067..27318 | + | 252 | WP_003108276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| JY391_RS23605 (JY391_23605) | 27315..27710 | + | 396 | WP_003159186.1 | type II toxin-antitoxin system VapC family toxin | - |
| JY391_RS23880 | 27722..28258 | + | 537 | WP_003159187.1 | hypothetical protein | - |
| JY391_RS23615 (JY391_23615) | 28672..29601 | - | 930 | Protein_36 | IS91 family transposase ISAzo26 | Transposase |
| JY391_RS23620 (JY391_23620) | 29760..30314 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| JY391_RS23625 (JY391_23625) | 30445..31275 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| JY391_RS23630 (JY391_23630) | 31413..32045 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| JY391_RS23635 (JY391_23635) | 32202..32548 | + | 347 | Protein_40 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| JY391_RS23640 (JY391_23640) | 32542..33380 | + | 839 | Protein_41 | Dihydropteroate synthase | ARG |
| JY391_RS23645 (JY391_23645) | 33508..33780 | + | 273 | WP_004883563.1 | hypothetical protein | - |
| JY391_RS23650 (JY391_23650) | 33962..34966 | - | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| JY391_RS23655 (JY391_23655) | 35194..36399 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| JY391_RS23660 (JY391_23660) | 36410..36715 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| JY391_RS23665 (JY391_23665) | 36759..36824 | + | 66 | Protein_46 | EAL domain-containing protein | - |
| JY391_RS23670 (JY391_23670) | 36942..37706 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| JY391_RS23675 (JY391_23675) | 38199..38783 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| JY391_RS23680 (JY391_23680) | 38783..40021 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| JY391_RS23685 (JY391_23685) | 40018..40923 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| JY391_RS23690 (JY391_23690) | 41045..41749 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JY391_RS23695 (JY391_23695) | 41813..42595 | + | 783 | Protein_52 | Methyl-accepting chemotaxis protein McpQ | VF |
| JY391_RS23700 (JY391_23700) | 42923..43684 | + | 762 | WP_002210513.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|