MGE detailed information
MGE type: Genomic_island MGE length: 9417 bp
Accession: NZ_CP071062 Location: 2649713..2659129 Organism: Dickeya solani strain IPO2019 Replicon: chromosome
Accession: NZ_CP071062 Location: 2649713..2659129 Organism: Dickeya solani strain IPO2019 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYR06_RS11670 () | 2644893..2645927 | - | 1035 | WP_022633732.1 | harpin HrpZ family protein | - |
| JYR06_RS11675 () | 2646088..2646498 | - | 411 | WP_022633733.1 | hypothetical protein | - |
| JYR06_RS11680 () | 2646495..2646683 | - | 189 | WP_022633734.1 | hypothetical protein | - |
| JYR06_RS11685 () | 2646718..2648787 | - | 2070 | WP_023637836.1 | type III secretion system outer membrane ring subunit SctC | - |
| JYR06_RS11690 () | 2648780..2649214 | - | 435 | WP_022633737.1 | hypothetical protein | - |
| JYR06_RS11695 () | 2649201..2649428 | - | 228 | WP_022633738.1 | type III secretion protein HrpF | - |
| JYR06_RS11700 () | 2649713..2650111 | - | 399 | WP_026594479.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| JYR06_RS11705 () | 2650114..2650407 | - | 294 | WP_022633740.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JYR06_RS11710 () | 2650625..2651674 | - | 1050 | WP_022633741.1 | hypothetical protein | - |
| JYR06_RS11715 () | 2652214..2653374 | + | 1161 | WP_022633742.1 | alpha/beta fold hydrolase | - |
| JYR06_RS11720 () | 2653385..2654698 | - | 1314 | WP_022633743.1 | lytic murein transglycosylase | - |
| JYR06_RS11725 () | 2654960..2655562 | - | 603 | WP_022633745.1 | type III secretion system stator protein SctL | - |
| JYR06_RS11730 () | 2655691..2656284 | - | 594 | WP_023637837.1 | hypothetical protein | - |
| JYR06_RS11735 () | 2656287..2657069 | - | 783 | WP_023637838.1 | Pyruvate dehydrogenase complex repressor | VF |
| JYR06_RS11740 () | 2657156..2657521 | - | 366 | WP_022633748.1 | EscI/YscI/HrpB family type III secretion system inner rod protein | - |
| JYR06_RS11745 () | 2657602..2657808 | - | 207 | WP_033111884.1 | hypothetical protein | - |
| JYR06_RS11750 () | 2657974..2658957 | - | 984 | WP_022633749.1 | hypothetical protein | VF |
| JYR06_RS11755 () | 2659400..2660041 | - | 642 | WP_022633751.1 | response regulator transcription factor | - |
| JYR06_RS11760 () | 2660075..2661541 | - | 1467 | WP_022633752.1 | PAS domain S-box protein | - |
| JYR06_RS11765 () | 2661807..2662361 | - | 555 | WP_022633753.1 | RNA polymerase sigma factor | - |
| JYR06_RS11770 () | 2662684..2663853 | + | 1170 | WP_022633754.1 | type III secretion system gatekeeper subunit SctW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|