MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 177354 bp
Accession: NZ_CP070995 Location: 10058..187411 Organism: Bifidobacterium longum subsp. longum strain KCTC 3128 Replicon: chromosome
Accession: NZ_CP070995 Location: 10058..187411 Organism: Bifidobacterium longum subsp. longum strain KCTC 3128 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLL128_RS00030 () | 6328..7959 | + | 1632 | WP_013582778.1 | substrate-binding domain-containing protein | - |
| BLL128_RS00035 () | 8037..8726 | - | 690 | WP_007054320.1 | M23 family metallopeptidase | - |
| BLL128_RS00055 () | 9733..10776 | - | 1044 | WP_007054363.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| BLL128_RS00060 () | 10773..11327 | - | 555 | WP_008783284.1 | N-alpha-acetyltransferase RimI | VF |
| BLL128_RS00065 () | 11344..12225 | - | 882 | WP_007054365.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| BLL128_RS00070 () | 12287..12853 | - | 567 | WP_007052688.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| BLL128_RS00075 () | 12874..13845 | - | 972 | WP_007057620.1 | DNA polymerase III subunit delta | - |
| BLL128_RS00080 () | 13912..15258 | - | 1347 | WP_013582779.1 | amidohydrolase family protein | - |
| BLL128_RS00085 () | 15398..17152 | - | 1755 | WP_016507697.1 | ComEC/Rec2 family competence protein | - |
| BLL128_RS00090 () | 17149..17646 | - | 498 | WP_007054369.1 | helix-hairpin-helix domain-containing protein | - |
| BLL128_RS00095 () | 18088..21051 | - | 2964 | WP_010080746.1 | leucine--tRNA ligase | - |
| BLL128_RS00100 () | 21094..21939 | - | 846 | WP_010080747.1 | glutamate ABC transporter substrate-binding protein | - |
| BLL128_RS00105 () | 22035..22985 | - | 951 | WP_007054371.1 | magnesium transporter CorA family protein | - |
| BLL128_RS00110 () | 23100..23945 | - | 846 | WP_007052680.1 | histidine phosphatase family protein | - |
| BLL128_RS00115 () | 24014..25309 | + | 1296 | WP_013582782.1 | DNA methyltransferase | - |
| BLL128_RS00120 () | 25337..25741 | - | 405 | WP_007052678.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| BLL128_RS00125 () | 26020..26955 | + | 936 | WP_007052677.1 | DMT family transporter | - |
| BLL128_RS00130 () | 27009..27119 | + | 111 | Protein_22 | nitroreductase | - |
| BLL128_RS00135 () | 27339..28307 | + | 969 | WP_007052675.1 | hypothetical protein | - |
| BLL128_RS00140 () | 28380..28919 | + | 540 | WP_032735440.1 | Peptidyl-prolyl cis-trans isomerase B | VF |
| BLL128_RS00145 () | 29016..29531 | + | 516 | WP_032740853.1 | IS3 family transposase ISBlo3 | Transposase |
| BLL128_RS00150 () | 29531..30103 | + | 573 | Protein_26 | IS3 family transposase ISBlo3 | Transposase |
| BLL128_RS00155 () | 30237..31439 | + | 1203 | WP_007053137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BLL128_RS00160 () | 31436..32401 | + | 966 | WP_013582545.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| BLL128_RS00165 () | 32398..33453 | + | 1056 | WP_013582544.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| BLL128_RS00170 () | 33568..33858 | + | 291 | Protein_30 | IS3 family transposase ISBlo3 | Transposase |
| BLL128_RS00175 () | 33976..36300 | - | 2325 | WP_206117442.1 | Bifunctional (p)ppGpp synthase/hydrolase RelA | VF |
| BLL128_RS00180 () | 36434..36910 | - | 477 | WP_007055963.1 | dUTP diphosphatase | - |
| BLL128_RS00185 () | 36910..37203 | - | 294 | WP_007052669.1 | DUF4193 domain-containing protein | - |
| BLL128_RS00190 () | 37362..38453 | + | 1092 | WP_007056777.1 | DUF3071 domain-containing protein | - |
| BLL128_RS00195 () | 38463..39731 | - | 1269 | WP_007054496.1 | alkaline phosphatase family protein | - |
| BLL128_RS00200 () | 39982..42711 | + | 2730 | WP_007052666.1 | DNA topoisomerase IV subunit A | - |
| BLL128_RS00205 () | 42856..43644 | + | 789 | WP_013582787.1 | Transcriptional regulatory protein TcrA | VF |
| BLL128_RS00210 () | 43655..48388 | - | 4734 | WP_013582788.1 | DEAD/DEAH box helicase | - |
| BLL128_RS00215 () | 48404..49396 | - | 993 | WP_013582789.1 | ribokinase | - |
| BLL128_RS00220 () | 49440..50666 | - | 1227 | WP_013582790.1 | MFS transporter | - |
| BLL128_RS00225 () | 50833..53109 | - | 2277 | WP_013582791.1 | type IIA DNA topoisomerase subunit B | - |
| BLL128_RS00230 () | 53167..54591 | - | 1425 | WP_007055162.1 | RNA polymerase principal sigma factor HrdB | VF |
| BLL128_RS00235 () | 54794..55456 | - | 663 | WP_007055157.1 | DUF4192 family protein | - |
| BLL128_RS00240 () | 55661..56743 | + | 1083 | WP_007055156.1 | polyprenyl synthetase family protein | - |
| BLL128_RS00245 () | 56887..59160 | + | 2274 | WP_032740855.1 | Serine/threonine-protein kinase PK-1 | VF |
| BLL128_RS00250 () | 59212..59916 | - | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BLL128_RS00255 () | 59977..60672 | + | 696 | WP_013582793.1 | hypothetical protein | - |
| BLL128_RS00260 () | 60826..61014 | - | 189 | WP_007054484.1 | hypothetical protein | - |
| BLL128_RS00265 () | 61061..62107 | - | 1047 | WP_013582794.1 | anthranilate phosphoribosyltransferase | - |
| BLL128_RS00270 () | 62835..63050 | + | 216 | WP_007055155.1 | transposase | - |
| BLL128_RS00275 () | 63361..66255 | - | 2895 | WP_007055154.1 | preprotein translocase subunit SecA | - |
| BLL128_RS00280 () | 66417..67079 | - | 663 | WP_007054480.1 | ribosome-associated translation inhibitor RaiA | - |
| BLL128_RS00290 () | 67956..68549 | - | 594 | WP_032736307.1 | RecX family transcriptional regulator | - |
| BLL128_RS00295 () | 68552..69745 | - | 1194 | WP_007052644.1 | recombinase RecA | - |
| BLL128_RS00300 () | 70046..70279 | - | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BLL128_RS00305 () | 70391..70906 | - | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BLL128_RS00310 () | 70966..71499 | - | 534 | WP_007054477.1 | nicotinamide-nucleotide amidohydrolase family protein | - |
| BLL128_RS00315 () | 71511..72146 | - | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BLL128_RS00320 () | 72323..75232 | - | 2910 | WP_013582797.1 | DNA translocase FtsK | - |
| BLL128_RS00325 () | 75444..76193 | + | 750 | WP_013582798.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BLL128_RS00330 () | 76227..77213 | - | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BLL128_RS00335 () | 77224..78678 | - | 1455 | WP_032743317.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BLL128_RS00340 () | 78810..79550 | + | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
| BLL128_RS00345 () | 79583..80599 | - | 1017 | WP_007052632.1 | DMT family transporter | - |
| BLL128_RS00350 () | 80739..81638 | - | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BLL128_RS00355 () | 81819..82679 | - | 861 | WP_013582800.1 | DUF5067 domain-containing protein | - |
| BLL128_RS00360 () | 83015..84247 | + | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BLL128_RS00365 () | 84282..85007 | + | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
| BLL128_RS00370 () | 85047..85688 | + | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BLL128_RS00375 () | 85778..87883 | + | 2106 | WP_013582801.1 | DUF262 domain-containing protein | - |
| BLL128_RS00380 () | 87933..88424 | - | 492 | WP_007052625.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BLL128_RS00385 () | 88421..88813 | - | 393 | WP_013410773.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BLL128_RS00390 () | 88958..91657 | - | 2700 | WP_013582802.1 | aconitate hydratase AcnA | - |
| BLL128_RS00395 () | 91775..94363 | - | 2589 | WP_013582803.1 | cation-translocating P-type ATPase | - |
| BLL128_RS00400 () | 94454..95149 | - | 696 | WP_007055252.1 | hypothetical protein | - |
| BLL128_RS00405 () | 95161..96429 | - | 1269 | WP_007055251.1 | class I SAM-dependent RNA methyltransferase | - |
| BLL128_RS00410 () | 96419..97177 | - | 759 | WP_008783114.1 | DUF3159 domain-containing protein | - |
| BLL128_RS00415 () | 97193..98047 | - | 855 | WP_011068026.1 | DUF3710 domain-containing protein | - |
| BLL128_RS00420 () | 98115..98975 | - | 861 | WP_007058594.1 | exodeoxyribonuclease III | - |
| BLL128_RS00425 () | 99080..101089 | - | 2010 | WP_013582805.1 | Glutathione import ATP-binding protein GsiA | VF |
| BLL128_RS00430 () | 101112..102116 | - | 1005 | WP_003832139.1 | ABC transporter permease | - |
| BLL128_RS00435 () | 102135..103061 | - | 927 | Protein_82 | ABC transporter permease | - |
| BLL128_RS00440 () | 103362..105002 | - | 1641 | WP_007054457.1 | ABC transporter substrate-binding protein | - |
| BLL128_RS00445 () | 105254..106327 | - | 1074 | WP_013582807.1 | Tyrosine recombinase XerC | VF |
| BLL128_RS00450 () | 106362..106619 | - | 258 | WP_007052610.1 | hypothetical protein | - |
| BLL128_RS00455 () | 106831..107934 | - | 1104 | WP_080557738.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BLL128_RS00460 () | 107892..108869 | - | 978 | WP_008783121.1 | chorismate mutase | - |
| BLL128_RS00465 () | 108949..109395 | - | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| BLL128_RS00470 () | 109495..111426 | - | 1932 | WP_007052606.1 | GTP-binding protein TypA/BipA | VF |
| BLL128_RS00475 () | 111741..113090 | - | 1350 | WP_007052605.1 | MFS transporter | - |
| BLL128_RS00480 () | 113122..114369 | - | 1248 | WP_007054451.1 | cysteine desulfurase | - |
| BLL128_RS00485 () | 114372..115265 | - | 894 | WP_007052603.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BLL128_RS00490 () | 115269..116900 | - | 1632 | WP_007054450.1 | L-aspartate oxidase | - |
| BLL128_RS00495 () | 116992..118272 | - | 1281 | WP_007052601.1 | quinolinate synthase NadA | - |
| BLL128_RS00500 () | 118332..119159 | - | 828 | WP_013582809.1 | NUDIX hydrolase | - |
| BLL128_RS00505 () | 119291..120007 | - | 717 | WP_007055260.1 | SMC-Scp complex subunit ScpB | - |
| BLL128_RS00510 () | 120020..120934 | - | 915 | WP_007052598.1 | segregation/condensation protein A | - |
| BLL128_RS00515 () | 120953..121792 | - | 840 | WP_007052597.1 | hypothetical protein | VF |
| BLL128_RS00520 () | 122054..124900 | - | 2847 | WP_013582810.1 | putative ABC transporter ATP-binding protein YknY | VF |
| BLL128_RS00525 () | 125028..125954 | - | 927 | WP_032743318.1 | Tyrosine recombinase XerD | VF |
| BLL128_RS00530 () | 126024..126407 | - | 384 | WP_007052594.1 | 50S ribosomal protein L20 | - |
| BLL128_RS00535 () | 126460..126654 | - | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| BLL128_RS00540 () | 126635..127357 | - | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
| BLL128_RS00545 () | 127642..128646 | - | 1005 | WP_007054442.1 | fused MFS/spermidine synthase | - |
| BLL128_RS00550 () | 128561..128776 | - | 216 | WP_162094057.1 | hypothetical protein | - |
| BLL128_RS00555 () | 128878..129603 | + | 726 | WP_007054441.1 | thiamine diphosphokinase | - |
| BLL128_RS00560 () | 129844..130902 | + | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BLL128_RS00565 () | 130996..131505 | + | 510 | WP_007054439.1 | Cys-tRNA(Pro) deacylase | - |
| BLL128_RS00570 () | 131545..132603 | - | 1059 | WP_074710142.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BLL128_RS00575 () | 132828..133784 | + | 957 | WP_007054437.1 | aldose 1-epimerase family protein | - |
| BLL128_RS00580 () | 133909..134853 | + | 945 | WP_007057264.1 | aldose 1-epimerase family protein | - |
| BLL128_RS00585 () | 135119..135439 | - | 321 | WP_007055264.1 | hypothetical protein | - |
| BLL128_RS00590 () | 135439..136191 | - | 753 | WP_007057260.1 | sigma-70 family RNA polymerase sigma factor | - |
| BLL128_RS00595 () | 136366..137919 | + | 1554 | WP_013582813.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| BLL128_RS00600 () | 138041..139036 | + | 996 | WP_013410747.1 | GNAT family N-acetyltransferase | - |
| BLL128_RS00605 () | 139155..142832 | - | 3678 | WP_013582814.1 | chromosome segregation protein SMC | - |
| BLL128_RS00610 () | 142893..144497 | - | 1605 | WP_007052575.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BLL128_RS00615 () | 145752..146603 | + | 852 | WP_007057256.1 | hypothetical protein | - |
| BLL128_RS00620 () | 146907..148502 | + | 1596 | WP_013582815.1 | aminopeptidase P family protein | - |
| BLL128_RS00625 () | 148551..149072 | + | 522 | WP_007057255.1 | NUDIX domain-containing protein | - |
| BLL128_RS00630 () | 149122..150831 | - | 1710 | WP_007052568.1 | Glutathione import ATP-binding protein GsiA | VF |
| BLL128_RS00635 () | 150835..152004 | - | 1170 | WP_007052567.1 | ABC transporter permease | - |
| BLL128_RS00640 () | 152006..153097 | - | 1092 | WP_007052566.1 | ABC transporter permease | - |
| BLL128_RS00645 () | 153265..154899 | - | 1635 | WP_007057390.1 | ABC transporter substrate-binding protein | - |
| BLL128_RS00650 () | 155179..156462 | - | 1284 | WP_007057958.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BLL128_RS00655 () | 156518..157330 | - | 813 | WP_007052563.1 | glucosamine-6-phosphate deaminase | - |
| BLL128_RS00660 () | 157668..158792 | + | 1125 | WP_007052562.1 | ROK family transcriptional regulator | - |
| BLL128_RS00665 () | 158932..159846 | - | 915 | WP_023658453.1 | ROK family protein | - |
| BLL128_RS00670 () | 160073..161287 | + | 1215 | WP_032740859.1 | ROK family transcriptional regulator | - |
| BLL128_RS00675 () | 161360..162256 | + | 897 | Protein_130 | carbohydrate kinase | - |
| BLL128_RS00680 () | 162331..162720 | + | 390 | WP_013582818.1 | VOC family protein | - |
| BLL128_RS00685 () | 162826..164070 | + | 1245 | WP_013582819.1 | MFS transporter | - |
| BLL128_RS00690 () | 164167..164655 | - | 489 | WP_013582820.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
| BLL128_RS00695 () | 164745..165431 | - | 687 | WP_007052555.1 | VWA domain-containing protein | - |
| BLL128_RS00700 () | 165575..166678 | - | 1104 | WP_007056379.1 | macro domain-containing protein | - |
| BLL128_RS00710 () | 167419..168348 | - | 930 | WP_013582822.1 | FtsQ-type POTRA domain-containing protein | - |
| BLL128_RS00715 () | 168483..170021 | - | 1539 | WP_013582823.1 | UDP-N-acetylmuramate--L-alanine ligase | - |
| BLL128_RS00720 () | 170122..171303 | - | 1182 | WP_007052550.1 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase | - |
| BLL128_RS00725 () | 171319..172536 | - | 1218 | WP_007054401.1 | putative lipid II flippase FtsW | - |
| BLL128_RS00730 () | 172523..173968 | - | 1446 | WP_007054400.1 | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase | - |
| BLL128_RS00735 () | 174023..175129 | - | 1107 | WP_007052547.1 | phospho-N-acetylmuramoyl-pentapeptide- transferase | - |
| BLL128_RS00740 () | 175174..176625 | - | 1452 | WP_007054398.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| BLL128_RS00745 () | 176674..177546 | - | 873 | WP_007054397.1 | hypothetical protein | - |
| BLL128_RS00750 () | 177573..179375 | - | 1803 | WP_013582825.1 | penicillin-binding protein 2 | - |
| BLL128_RS00755 () | 179372..179821 | - | 450 | WP_007052543.1 | hypothetical protein | - |
| BLL128_RS00760 () | 179828..180907 | - | 1080 | WP_007052542.1 | 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH | - |
| BLL128_RS00765 () | 180907..181428 | - | 522 | WP_007052541.1 | division/cell wall cluster transcriptional repressor MraZ | - |
| BLL128_RS00770 () | 181761..184040 | + | 2280 | WP_007052539.1 | AAA family ATPase | - |
| BLL128_RS00775 () | 184051..185250 | + | 1200 | WP_007054393.1 | phosphoglycerate dehydrogenase | - |
| BLL128_RS00780 () | 185385..185861 | - | 477 | WP_007052537.1 | transcriptional regulator NrdR | - |
| BLL128_RS00785 () | 185878..186114 | - | 237 | WP_032740860.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BLL128_RS00790 () | 186194..186955 | - | 762 | WP_013582291.1 | IS21 family transposase ISBlo2 | Transposase |
| BLL128_RS00795 () | 186952..188409 | - | 1458 | WP_013582292.1 | IS21 family transposase | - |
| BLL128_RS00800 () | 188829..189554 | + | 726 | WP_007052535.1 | transcriptional repressor LexA | - |
| BLL128_RS00805 () | 189720..190658 | + | 939 | WP_007052534.1 | cation diffusion facilitator family transporter | - |
| BLL128_RS00810 () | 190800..191762 | - | 963 | WP_007052533.1 | L-lactate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|