MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_CP070962 Location: 1974359..1987168 Organism: Escherichia coli strain K-12 J53 Replicon: chromosome
Accession: NZ_CP070962 Location: 1974359..1987168 Organism: Escherichia coli strain K-12 J53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTR57_RS09680 (1974359) | 1974359..1974625 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| JTR57_RS09685 (1974625) | 1974625..1975947 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| JTR57_RS09690 (1976259) | 1976259..1976467 | + | 209 | Protein_1898 | AraC family transcriptional regulator | - |
| JTR57_RS09695 (1976722) | 1976722..1977948 | + | 1227 | Protein_1899 | hypothetical protein | VF |
| JTR57_RS09700 (1977962) | 1977962..1978492 | + | 531 | WP_000876763.1 | hypothetical protein | VF |
| JTR57_RS09705 (1978505) | 1978505..1979008 | + | 504 | WP_000825452.1 | hypothetical protein | VF |
| JTR57_RS09710 (1979067) | 1979067..1979981 | + | 915 | WP_000520676.1 | hypothetical protein | VF |
| JTR57_RS09715 (1980315) | 1980315..1982594 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| JTR57_RS09720 (1982842) | 1982842..1983039 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| JTR57_RS09725 (1983114) | 1983114..1983875 | + | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| JTR57_RS09730 (1984277) | 1984277..1985959 | + | 1683 | WP_001295684.1 | sulfatase | - |
| JTR57_RS09735 (1986011) | 1986011..1987168 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| JTR57_RS09740 (1987134) | 1987134..1987256 | - | 123 | WP_120795387.1 | protein YneP | - |
| JTR57_RS09745 (1987459) | 1987459..1989144 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| JTR57_RS09750 (1989182) | 1989182..1991554 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.003 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.003 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.003 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.003 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.003 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.003 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.003 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.003 |