MGE detailed information
MGE type: Mobilizable plasmid MGE length: 46743 bp
Accession: NZ_CP070958 Location: 1..46743 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P4
Accession: NZ_CP070958 Location: 1..46743 Organism: Escherichia fergusonii strain EF44 Replicon: plasmid pTB44P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYG65_RS23025 (JYG65_22930) | 1..285 | + | 285 | WP_000974937.1 | helix-turn-helix transcriptional regulator | - |
| JYG65_RS23030 (JYG65_22935) | 1204..1635 | + | 432 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| JYG65_RS23035 (JYG65_22940) | 1963..2376 | + | 414 | Protein_3 | IS3 family transposase ISEc48 | Transposase |
| JYG65_RS23040 (JYG65_22945) | 2780..3238 | + | 459 | WP_012512780.1 | hypothetical protein | - |
| JYG65_RS23045 (JYG65_22950) | 3238..4035 | + | 798 | WP_002433409.1 | hypothetical protein | - |
| JYG65_RS23050 (JYG65_22955) | 4032..5261 | + | 1230 | WP_000838352.1 | hypothetical protein | - |
| JYG65_RS23055 (JYG65_22960) | 5285..6520 | + | 1236 | WP_158522432.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JYG65_RS23060 (JYG65_22965) | 6527..6961 | + | 435 | WP_000900356.1 | hypothetical protein | - |
| JYG65_RS23065 (JYG65_22970) | 6967..8931 | + | 1965 | WP_000903960.1 | ATP-binding cassette domain-containing protein | - |
| JYG65_RS23070 (JYG65_22975) | 9564..9915 | + | 352 | Protein_10 | IS4 family transposase | - |
| JYG65_RS23075 (JYG65_22980) | 10061..10318 | + | 258 | WP_024133204.1 | replication regulatory protein RepA | - |
| JYG65_RS23080 (JYG65_22985) | 10526..10600 | + | 75 | WP_071779410.1 | RepA leader peptide Tap | - |
| JYG65_RS23085 (JYG65_22990) | 10593..11450 | + | 858 | WP_000137912.1 | incFII family plasmid replication initiator RepA | - |
| JYG65_RS23090 (JYG65_22995) | 12532..14172 | + | 1641 | WP_000259343.1 | Methyl-accepting chemotaxis protein I | VF |
| JYG65_RS23095 (JYG65_23000) | 15306..15840 | - | 535 | Protein_15 | IS630 family transposase | - |
| JYG65_RS23100 (JYG65_23005) | 16291..16563 | - | 273 | WP_022630248.1 | hypothetical protein | VF |
| JYG65_RS23110 (JYG65_23010) | 17787..19367 | - | 1581 | WP_000381478.1 | IS66 family transposase ISCro1 | Transposase |
| JYG65_RS23115 (JYG65_23015) | 19600..19930 | - | 331 | Protein_18 | recombinase family protein | - |
| JYG65_RS23120 (JYG65_23020) | 20175..20795 | + | 621 | WP_000864790.1 | ParA family protein | - |
| JYG65_RS23125 (JYG65_23025) | 20846..21076 | + | 231 | WP_000051067.1 | plasmid partition protein ParG | - |
| JYG65_RS23130 (JYG65_23030) | 21267..21583 | - | 317 | Protein_21 | hypothetical protein | - |
| JYG65_RS23135 (JYG65_23035) | 21623..22459 | - | 837 | WP_002433426.1 | replication initiation protein | - |
| JYG65_RS23140 (JYG65_23040) | 23845..24180 | - | 336 | WP_024133211.1 | hypothetical protein | - |
| JYG65_RS23145 (JYG65_23045) | 24415..24747 | + | 333 | WP_223677354.1 | plasmid mobilization protein MobA | - |
| JYG65_RS23150 (JYG65_23050) | 24758..27466 | + | 2709 | WP_236942044.1 | Protein TraI | Relaxase |
| JYG65_RS23155 (JYG65_23055) | 27506..27997 | - | 492 | Protein_26 | IS6 family transposase | - |
| JYG65_RS23160 (JYG65_23060) | 27986..28258 | - | 273 | Protein_27 | IS3 family transposase | - |
| JYG65_RS23165 (JYG65_23065) | 28392..28514 | + | 123 | Protein_28 | MbeD family mobilization/exclusion protein | - |
| JYG65_RS23170 (JYG65_23070) | 28574..29422 | - | 849 | Protein_29 | IS66 family transposase ISShdy2 | Transposase |
| JYG65_RS23290 | 29419..29569 | - | 151 | Protein_30 | hypothetical protein | - |
| JYG65_RS23175 (JYG65_23075) | 29522..29752 | - | 231 | WP_252990174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JYG65_RS23180 | 30630..31280 | + | 651 | Protein_32 | IS3 family transposase ISKpn38 | Transposase |
| JYG65_RS23185 (JYG65_23085) | 31558..32154 | - | 597 | Protein_33 | IS66 family transposase ISCro1 | Transposase |
| JYG65_RS23190 (JYG65_23090) | 32244..32672 | - | 429 | Protein_34 | hypothetical protein | - |
| JYG65_RS23195 (JYG65_23095) | 33731..33949 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JYG65_RS23200 (JYG65_23100) | 33951..34256 | + | 306 | WP_001159869.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JYG65_RS23205 (JYG65_23105) | 34257..34457 | + | 201 | Protein_37 | phage integrase family protein | - |
| JYG65_RS23210 (JYG65_23110) | 34442..35353 | - | 912 | WP_000549737.1 | DMT family transporter | - |
| JYG65_RS23215 (JYG65_23115) | 35470..35607 | + | 138 | Protein_39 | Lrp/AsnC family transcriptional regulator | - |
| JYG65_RS23220 (JYG65_23120) | 35607..36656 | + | 1050 | Protein_40 | IS4 family transposase ISCro3 | Transposase |
| JYG65_RS23225 (JYG65_23125) | 36756..38129 | - | 1374 | WP_000244368.1 | IS4 family transposase ISEc13 | Transposase |
| JYG65_RS23230 (JYG65_23130) | 38341..38775 | - | 435 | WP_000525034.1 | IS200-IS605 family transposase ISSod23 | Transposase |
| JYG65_RS23235 (JYG65_23135) | 39620..43138 | + | 3519 | WP_223674091.1 | Ig-like domain-containing protein | - |
| JYG65_RS23240 | 43339..43476 | + | 138 | Protein_44 | IS3 family transposase | - |
| JYG65_RS23245 (JYG65_23140) | 43646..44491 | - | 846 | WP_158522433.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| JYG65_RS23250 (JYG65_23145) | 44968..45175 | + | 208 | Protein_46 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| JYG65_RS23255 (JYG65_23150) | 45205..45795 | - | 591 | Protein_47 | IS6 family transposase | - |
| JYG65_RS23260 (JYG65_23155) | 45904..46306 | + | 403 | Protein_48 | IS110 family transposase ISSm3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|