MGE detailed information
MGE type: Genomic_island MGE length: 14023 bp
Accession: NZ_CP070930 Location: 2342247..2356269 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Accession: NZ_CP070930 Location: 2342247..2356269 Organism: Escherichia coli strain 30COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR883_RS11250 () | 2342247..2342513 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| JR883_RS11255 () | 2342513..2343835 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| JR883_RS11260 () | 2344147..2344355 | + | 209 | Protein_2202 | helix-turn-helix transcriptional regulator | - |
| JR883_RS11265 () | 2344610..2345836 | + | 1227 | Protein_2203 | hypothetical protein | VF |
| JR883_RS11270 () | 2345850..2346248 | + | 399 | Protein_2204 | hypothetical protein | VF |
| JR883_RS11275 () | 2346340..2347568 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| JR883_RS11280 () | 2347582..2347716 | + | 135 | Protein_2206 | type 1 fimbrial protein | - |
| JR883_RS11285 () | 2347729..2348232 | + | 504 | WP_061360145.1 | hypothetical protein | VF |
| JR883_RS11290 () | 2348291..2349205 | + | 915 | WP_205899467.1 | hypothetical protein | VF |
| JR883_RS11295 () | 2349539..2351818 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| JR883_RS11300 () | 2352066..2352263 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| JR883_RS11305 () | 2352338..2353099 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| JR883_RS11310 () | 2353501..2355183 | + | 1683 | WP_001515303.1 | sulfatase | - |
| JR883_RS11315 () | 2355235..2356392 | + | 1158 | Protein_2213 | anaerobic sulfatase maturase | - |
| JR883_RS11320 () | 2356358..2356480 | - | 123 | WP_120795387.1 | protein YneP | - |
| JR883_RS11325 () | 2356683..2358368 | + | 1686 | WP_000628585.1 | ABC transporter ATP-binding protein/permease | - |
| JR883_RS11330 () | 2358406..2360778 | + | 2373 | WP_000832449.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.007 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.007 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.006 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.009 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.007 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.007 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.007 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.007 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.007 |