MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 50323 bp
Accession: NZ_CP070925 Location: 1..50323 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-5
Accession: NZ_CP070925 Location: 1..50323 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR909_RS25175 () | 1..820 | + | 820 | WP_205899304.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JR909_RS25180 () | 975..1379 | - | 405 | WP_000059893.1 | hypothetical protein | - |
| JR909_RS25185 () | 1442..1891 | - | 450 | WP_001282381.1 | H-NS histone family protein | - |
| JR909_RS25190 () | 1903..4227 | - | 2325 | WP_001235773.1 | type IA DNA topoisomerase | - |
| JR909_RS25195 () | 4247..4492 | - | 246 | WP_001243650.1 | hypothetical protein | - |
| JR909_RS25200 () | 5029..5122 | + | 94 | Protein_5 | hypothetical protein | - |
| JR909_RS25205 () | 5204..5413 | - | 210 | WP_024256774.1 | hypothetical protein | - |
| JR909_RS25210 () | 5539..5934 | - | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| JR909_RS25215 () | 5931..7766 | - | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JR909_RS25220 () | 7771..8808 | - | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| JR909_RS25225 () | 8826..10040 | - | 1215 | WP_001295061.1 | Type IV secretion system protein virB10 | VF |
| JR909_RS25230 () | 10037..10966 | - | 930 | WP_000776689.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| JR909_RS25235 () | 10972..11694 | - | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| JR909_RS25240 () | 11884..12939 | - | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| JR909_RS25245 () | 12951..13211 | - | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| JR909_RS25250 () | 13221..13958 | - | 738 | WP_000737859.1 | pilus assembly protein | - |
| JR909_RS25255 () | 13960..16719 | - | 2760 | WP_000108725.1 | Type IV secretion system protein virB4 | VF |
| JR909_RS25260 () | 16743..17033 | - | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| JR909_RS25265 () | 17017..17661 | - | 645 | WP_000953539.1 | Type IV secretion system protein virB1 | VF |
| JR909_RS25270 () | 17887..18378 | - | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| JR909_RS25275 () | 18739..19896 | - | 1158 | WP_000538023.1 | hypothetical protein | - |
| JR909_RS25280 () | 19899..20444 | - | 546 | WP_038976855.1 | hypothetical protein | - |
| JR909_RS25285 () | 20771..21043 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| JR909_RS25290 () | 21056..21205 | - | 150 | WP_000003880.1 | hypothetical protein | - |
| JR909_RS25295 () | 21492..21821 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| JR909_RS25300 () | 21914..22129 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| JR909_RS25305 () | 22119..22364 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| JR909_RS25310 () | 22409..22732 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| JR909_RS25315 () | 22878..23159 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JR909_RS25320 () | 23149..23400 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| JR909_RS25325 () | 24678..25514 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| JR909_RS25330 () | 25554..26000 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| JR909_RS25335 () | 26068..26490 | + | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| JR909_RS25340 () | 26550..27518 | - | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| JR909_RS25345 () | 27520..27813 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| JR909_RS25350 () | 27829..28059 | - | 231 | WP_000051064.1 | partitioning protein | - |
| JR909_RS25355 () | 28111..28731 | - | 621 | WP_000864791.1 | ParA family protein | - |
| JR909_RS25360 () | 29017..29655 | + | 639 | WP_024245155.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JR909_RS25365 () | 29754..31505 | - | 1752 | Protein_38 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JR909_RS25370 () | 31494..31901 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| JR909_RS25375 () | 32039..32840 | + | 802 | Protein_40 | EamA family transporter | - |
| JR909_RS25380 () | 32872..34071 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JR909_RS25385 () | 34177..34812 | + | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JR909_RS25390 () | 35139..35729 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| JR909_RS25395 () | 35866..36438 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| JR909_RS25400 () | 36475..37866 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| JR909_RS25405 () | 37899..38327 | + | 429 | Protein_46 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| JR909_RS25410 () | 38646..39302 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| JR909_RS25415 () | 39697..40313 | + | 617 | Protein_48 | transposase | - |
| JR909_RS25420 () | 40380..41084 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR909_RS25425 () | 41138..42142 | - | 1005 | Protein_50 | IS91 family transposase ISAzo26 | Transposase |
| JR909_RS25430 () | 42298..42771 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| JR909_RS25435 () | 43018..43722 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR909_RS25440 () | 43775..44572 | + | 798 | Protein_53 | Tn3 family transposase TnpA_IS3000 | Transposase |
| JR909_RS25445 () | 44689..45135 | + | 447 | WP_038988891.1 | DMT family transporter | - |
| JR909_RS25450 () | 45137..45310 | + | 174 | Protein_55 | IS6 family transposase IS6100 | Transposase |
| JR909_RS25455 () | 45450..45515 | - | 66 | Protein_56 | EAL domain-containing protein | - |
| JR909_RS25460 () | 45530..45877 | - | 348 | WP_038988888.1 | hypothetical protein | - |
| JR909_RS25465 () | 45874..46023 | - | 150 | WP_160177685.1 | hypothetical protein | - |
| JR909_RS25470 () | 46102..47454 | - | 1353 | WP_205899305.1 | Mobilization protein A | Relaxase |
| JR909_RS25475 () | 47540..48244 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JR909_RS25480 () | 48297..50323 | + | 2027 | Protein_61 | Tn3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|