MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60993 bp
Accession: NZ_CP070924 Location: 1..60993 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-4
Accession: NZ_CP070924 Location: 1..60993 Organism: Escherichia coli strain 40EC Replicon: plasmid p40EC-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR909_RS24825 () | 1..1029 | + | 1029 | WP_001175215.1 | replication initiation protein | - |
| JR909_RS24830 () | 2628..2789 | + | 162 | WP_001366886.1 | type I toxin-antitoxin system Hok family toxin | - |
| JR909_RS24835 () | 2939..3535 | + | 597 | WP_000125165.1 | hypothetical protein | - |
| JR909_RS24840 () | 3553..3837 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| JR909_RS24845 () | 3911..4576 | - | 666 | WP_000532149.1 | P-loop NTPase | - |
| JR909_RS24850 () | 5165..5494 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| JR909_RS24855 () | 5895..6410 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| JR909_RS24860 () | 6514..7056 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| JR909_RS24865 () | 7053..7307 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| JR909_RS24870 () | 7304..7546 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| JR909_RS24875 () | 8117..8410 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| JR909_RS24880 () | 8899..9147 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JR909_RS24885 () | 9144..9491 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JR909_RS24890 () | 9579..9761 | - | 183 | WP_001428470.1 | hypothetical protein | - |
| JR909_RS24895 () | 10263..10562 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| JR909_RS24900 () | 10822..11148 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| JR909_RS24905 () | 11150..11590 | - | 441 | WP_023223352.1 | hypothetical protein | - |
| JR909_RS24910 () | 11610..12317 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| JR909_RS24915 () | 12319..13071 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| JR909_RS24920 () | 13089..13490 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| JR909_RS24925 () | 13858..14199 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| JR909_RS24930 () | 14196..18509 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| JR909_RS24935 () | 18730..20355 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| JR909_RS24940 () | 20427..21200 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| JR909_RS24945 () | 21159..21599 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| JR909_RS24950 () | 21945..22151 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| JR909_RS24955 () | 22220..24385 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| JR909_RS24960 () | 24390..24965 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| JR909_RS24965 () | 25135..26811 | - | 1677 | WP_001401811.1 | PcfJ domain-containing protein | - |
| JR909_RS24970 () | 26906..27421 | - | 516 | WP_000698398.1 | thermonuclease family protein | - |
| JR909_RS24975 () | 27468..28121 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| JR909_RS24980 () | 28133..29257 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| JR909_RS24985 () | 30100..30309 | + | 210 | WP_001444223.1 | hypothetical protein | - |
| JR909_RS24990 () | 31017..32292 | - | 1276 | Protein_33 | hypothetical protein | VF |
| JR909_RS24995 () | 32305..32940 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JR909_RS25000 () | 32944..33426 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| JR909_RS25005 () | 33492..34055 | - | 564 | WP_034169414.1 | hypothetical protein | - |
| JR909_RS25010 () | 34105..35214 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JR909_RS25015 () | 35205..36743 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| JR909_RS25020 () | 36768..37262 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| JR909_RS25025 () | 37246..38568 | - | 1323 | WP_000454142.1 | type 4b pilus protein PilO2 | - |
| JR909_RS25030 () | 38607..40250 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| JR909_RS25035 () | 40243..40779 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| JR909_RS25040 () | 40826..42784 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JR909_RS25045 () | 42800..43855 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| JR909_RS25050 () | 43874..45013 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| JR909_RS25055 () | 45003..45704 | - | 702 | WP_000274524.1 | Type IV secretion system protein PtlF | VF |
| JR909_RS25060 () | 45770..46504 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| JR909_RS25065 () | 46670..49027 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| JR909_RS25070 () | 49033..49353 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| JR909_RS25075 () | 49424..49612 | - | 189 | WP_050567133.1 | hypothetical protein | - |
| JR909_RS25080 () | 49714..50298 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| JR909_RS25085 () | 50319..50717 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| JR909_RS25090 () | 50836..51273 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| JR909_RS25095 () | 51279..52514 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| JR909_RS25100 () | 52517..52816 | - | 300 | WP_000835763.1 | IncN plasmid KikA protein | - |
| JR909_RS25105 () | 52864..53673 | + | 810 | WP_024237698.1 | hypothetical protein | - |
| JR909_RS25110 () | 53896..54120 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| JR909_RS25115 () | 54129..54773 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| JR909_RS25120 () | 54779..55774 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| JR909_RS25125 () | 55778..56035 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| JR909_RS25130 () | 56032..56334 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| JR909_RS25135 () | 56315..56572 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| JR909_RS25140 () | 56605..57051 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| JR909_RS25145 () | 57062..57232 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| JR909_RS25150 () | 57236..57679 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| JR909_RS25155 () | 58053..59006 | - | 954 | WP_072089442.1 | SPFH/Band 7/PHB domain protein | - |
| JR909_RS25160 () | 59033..59209 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| JR909_RS25165 () | 59202..59417 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| JR909_RS25170 () | 59410..59916 | - | 507 | WP_001326595.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|