MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111012 bp
Accession: NZ_CP070908 Location: 1..111012 Organism: Escherichia coli strain 88COLEC Replicon: plasmid p88COLEC-2
Accession: NZ_CP070908 Location: 1..111012 Organism: Escherichia coli strain 88COLEC Replicon: plasmid p88COLEC-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR901_RS23900 () | 1..1056 | + | 1056 | WP_001293471.1 | replication protein RepA | - |
| JR901_RS23905 () | 1546..1758 | - | 213 | WP_001229345.1 | hypothetical protein | - |
| JR901_RS23910 () | 1758..2093 | - | 336 | WP_000644408.1 | hypothetical protein | - |
| JR901_RS23915 () | 2309..2584 | - | 276 | WP_205899146.1 | hypothetical protein | - |
| JR901_RS23920 () | 2640..3065 | - | 426 | WP_205899147.1 | hypothetical protein | - |
| JR901_RS23925 () | 3157..3987 | - | 831 | WP_000715581.1 | SPFH/Band 7/PHB domain protein | - |
| JR901_RS23930 () | 3991..4191 | - | 201 | WP_021547951.1 | hypothetical protein | - |
| JR901_RS23935 () | 4285..6624 | - | 2340 | WP_205899148.1 | recombinase RecA | - |
| JR901_RS23940 () | 6627..6893 | - | 267 | WP_000920225.1 | hypothetical protein | - |
| JR901_RS23945 () | 6893..7837 | - | 945 | WP_001718062.1 | 5'-3' exonuclease SAM fold family protein | - |
| JR901_RS23950 () | 7898..8926 | - | 1029 | WP_001717300.1 | hypothetical protein | - |
| JR901_RS23955 () | 9044..9475 | - | 432 | WP_001090697.1 | hypothetical protein | - |
| JR901_RS23960 () | 10015..10578 | + | 564 | WP_052988641.1 | hypothetical protein | - |
| JR901_RS23965 () | 10609..14115 | - | 3507 | WP_205899149.1 | DNA polymerase III subunit alpha | - |
| JR901_RS23970 () | 14296..15531 | - | 1236 | WP_205899150.1 | AAA family ATPase | - |
| JR901_RS23975 () | 15627..17735 | - | 2109 | WP_142444744.1 | cobalamin biosynthesis protein CobT | - |
| JR901_RS23980 () | 17834..18046 | - | 213 | WP_072770585.1 | hypothetical protein | - |
| JR901_RS23985 () | 18298..18684 | + | 387 | WP_001282576.1 | transcriptional regulator | - |
| JR901_RS23990 () | 18679..19782 | - | 1104 | WP_048959201.1 | site-specific integrase | - |
| JR901_RS23995 () | 19956..20366 | - | 411 | WP_072644914.1 | type II toxin-antitoxin system YafO family toxin | - |
| JR901_RS24000 () | 20376..20984 | - | 609 | WP_171949057.1 | hypothetical protein | - |
| JR901_RS24005 () | 21080..21325 | - | 246 | WP_072644913.1 | GrxA family glutaredoxin | - |
| JR901_RS24010 () | 21615..22436 | + | 822 | WP_072644912.1 | hypothetical protein | - |
| JR901_RS24015 () | 22463..23674 | + | 1212 | WP_001308880.1 | hypothetical protein | - |
| JR901_RS24035 () | 24879..25169 | - | 291 | WP_205899151.1 | C-type natriuretic protein | - |
| JR901_RS24040 () | 25166..25318 | - | 153 | WP_000613553.1 | hypothetical protein | - |
| JR901_RS24045 () | 25315..25530 | - | 216 | WP_000636535.1 | hypothetical protein | - |
| JR901_RS24050 () | 25514..25693 | - | 180 | WP_021512312.1 | hypothetical protein | - |
| JR901_RS24055 () | 25690..27012 | - | 1323 | WP_097747390.1 | hypothetical protein | - |
| JR901_RS24060 () | 27009..27485 | - | 477 | WP_164875020.1 | hypothetical protein | - |
| JR901_RS24065 () | 27546..28328 | - | 783 | WP_205899152.1 | hypothetical protein | - |
| JR901_RS24070 () | 28404..29519 | - | 1116 | WP_064769955.1 | hypothetical protein | - |
| JR901_RS24075 () | 29667..31007 | - | 1341 | WP_000137333.1 | AAA family ATPase | - |
| JR901_RS24080 () | 31051..31791 | - | 741 | WP_063277813.1 | hypothetical protein | - |
| JR901_RS24085 () | 31985..32740 | - | 756 | WP_021533207.1 | DUF2971 domain-containing protein | - |
| JR901_RS24090 () | 32785..33138 | - | 354 | WP_160378290.1 | hypothetical protein | - |
| JR901_RS24095 () | 33144..33812 | - | 669 | WP_000161229.1 | AAA family ATPase | - |
| JR901_RS24100 () | 34131..34400 | + | 270 | WP_001351987.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| JR901_RS24105 () | 34408..34929 | + | 522 | WP_000072677.1 | GNAT family N-acetyltransferase | Toxin Detail |
| JR901_RS24110 () | 35098..35349 | - | 252 | WP_000901559.1 | hypothetical protein | - |
| JR901_RS24115 () | 35351..36043 | - | 693 | WP_205899153.1 | hypothetical protein | - |
| JR901_RS24120 () | 36057..36380 | - | 324 | WP_072651717.1 | hypothetical protein | - |
| JR901_RS24125 () | 36583..39153 | - | 2571 | WP_205899154.1 | tail fiber protein | - |
| JR901_RS24130 () | 39290..39973 | + | 684 | WP_205899155.1 | hypothetical protein | - |
| JR901_RS24135 () | 40609..45336 | - | 4728 | WP_205899156.1 | DUF1983 domain-containing protein | - |
| JR901_RS24140 () | 45354..45947 | - | 594 | WP_205899157.1 | tail assembly protein | - |
| JR901_RS24145 () | 45935..46732 | - | 798 | WP_001405045.1 | C40 family peptidase | - |
| JR901_RS24150 () | 46725..47423 | - | 699 | WP_000511446.1 | phage minor tail protein L | - |
| JR901_RS24155 () | 47506..47841 | - | 336 | WP_205899158.1 | phage tail protein | - |
| JR901_RS24160 () | 47884..52461 | - | 4578 | WP_205899159.1 | tape measure protein | - |
| JR901_RS24165 () | 52469..52693 | - | 225 | WP_000952686.1 | hypothetical protein | - |
| JR901_RS24170 () | 52819..53136 | - | 318 | WP_000163861.1 | hypothetical protein | - |
| JR901_RS24175 () | 53192..53938 | - | 747 | WP_000072377.1 | Ig domain-containing protein | - |
| JR901_RS24180 () | 54013..54396 | - | 384 | WP_000469440.1 | minor capsid protein | - |
| JR901_RS24185 () | 54398..54871 | - | 474 | WP_000523628.1 | hypothetical protein | - |
| JR901_RS24190 () | 54862..55206 | - | 345 | WP_001027663.1 | hypothetical protein | - |
| JR901_RS24195 () | 55286..56119 | - | 834 | WP_000057118.1 | hypothetical protein | - |
| JR901_RS24200 () | 56119..56553 | - | 435 | WP_205899160.1 | hypothetical protein | - |
| JR901_RS24205 () | 56598..57257 | - | 660 | WP_072644905.1 | Ig domain-containing protein | - |
| JR901_RS24210 () | 57331..58206 | - | 876 | WP_072644904.1 | phage capsid protein | - |
| JR901_RS24215 () | 58232..59119 | - | 888 | WP_001055285.1 | hypothetical protein | - |
| JR901_RS24220 () | 59141..60715 | - | 1575 | WP_032217428.1 | phage portal protein | - |
| JR901_RS24225 () | 60742..61998 | - | 1257 | WP_001007299.1 | phage terminase large subunit | - |
| JR901_RS24230 () | 61998..62630 | - | 633 | WP_000215413.1 | hypothetical protein | - |
| JR901_RS24235 () | 62827..63093 | - | 267 | WP_000176292.1 | hypothetical protein | - |
| JR901_RS24240 () | 63103..63993 | - | 891 | WP_086722039.1 | hypothetical protein | - |
| JR901_RS24245 () | 63990..64655 | - | 666 | WP_000049676.1 | ATP-binding cassette domain-containing protein | - |
| JR901_RS24250 () | 64652..65320 | - | 669 | WP_000161986.1 | ParB/Srx family N-terminal domain-containing protein | - |
| JR901_RS24255 () | 65320..66000 | - | 681 | WP_000382660.1 | ParB N-terminal domain-containing protein | - |
| JR901_RS24260 () | 66083..67642 | + | 1560 | WP_021520107.1 | DEAD/DEAH box helicase | - |
| JR901_RS24265 () | 67645..67923 | + | 279 | WP_001291061.1 | hypothetical protein | - |
| JR901_RS24270 () | 67956..68555 | + | 600 | WP_012640740.1 | hypothetical protein | - |
| JR901_RS24275 () | 68940..69740 | - | 801 | WP_063277800.1 | hypothetical protein | - |
| JR901_RS24280 () | 69843..70361 | + | 519 | WP_205899161.1 | transcriptional regulator | - |
| JR901_RS24285 () | 70658..71308 | + | 651 | WP_205899162.1 | hypothetical protein | - |
| JR901_RS24290 () | 71356..71586 | + | 231 | WP_205899163.1 | hypothetical protein | - |
| JR901_RS24295 () | 72210..72692 | - | 483 | WP_001009193.1 | hypothetical protein | - |
| JR901_RS24300 () | 72897..73178 | - | 282 | WP_000129290.1 | hypothetical protein | - |
| JR901_RS24305 () | 73514..73888 | - | 375 | WP_000522000.1 | hypothetical protein | - |
| JR901_RS24310 () | 74006..74401 | - | 396 | WP_001717183.1 | hypothetical protein | - |
| JR901_RS24315 () | 74528..74839 | - | 312 | WP_000749406.1 | hypothetical protein | - |
| JR901_RS24320 () | 74993..75322 | - | 330 | WP_001755489.1 | hypothetical protein | - |
| JR901_RS24325 () | 76899..77297 | - | 399 | WP_032252448.1 | hypothetical protein | - |
| JR901_RS24330 () | 77547..78244 | - | 698 | Protein_83 | IS1 family transposase | - |
| JR901_RS24335 () | 78369..78611 | - | 243 | WP_061092983.1 | DUF1380 family protein | - |
| JR901_RS24340 () | 78771..80804 | - | 2034 | WP_061092962.1 | methionine--tRNA ligase | - |
| JR901_RS24345 () | 80962..82062 | + | 1101 | WP_000004356.1 | iron-sulfur cluster carrier protein ApbC | - |
| JR901_RS24350 () | 82100..82489 | - | 390 | WP_048959303.1 | DNA repair protein | - |
| JR901_RS24355 () | 82588..82841 | - | 254 | Protein_88 | DNA polymerase III subunit theta | - |
| JR901_RS24360 () | 83200..84756 | + | 1557 | WP_205899168.1 | type I restriction-modification system subunit M | - |
| JR901_RS24365 () | 84753..85970 | + | 1218 | WP_205899164.1 | restriction endonuclease subunit S | - |
| JR901_RS24370 () | 86092..89208 | + | 3117 | WP_205899165.1 | HsdR family type I site-specific deoxyribonuclease | - |
| JR901_RS24375 () | 89203..89764 | - | 562 | Protein_92 | DNA modification methylase | - |
| JR901_RS24380 () | 89868..90482 | - | 615 | WP_000467662.1 | hypothetical protein | - |
| JR901_RS24385 () | 90821..91390 | - | 570 | WP_001755500.1 | hypothetical protein | - |
| JR901_RS24390 () | 91530..91688 | - | 159 | WP_021520148.1 | DUF3927 family protein | - |
| JR901_RS24395 () | 91688..92113 | - | 426 | WP_000900261.1 | tellurite/colicin resistance protein | - |
| JR901_RS24400 () | 92207..92395 | - | 189 | WP_001103988.1 | hypothetical protein | - |
| JR901_RS24405 () | 92405..92899 | - | 495 | WP_205899166.1 | hypothetical protein | - |
| JR901_RS24410 () | 93045..93695 | - | 651 | WP_205899167.1 | ribonuclease HI | - |
| JR901_RS24415 () | 94226..94456 | - | 231 | WP_032203380.1 | hypothetical protein | - |
| JR901_RS24420 () | 94642..95235 | - | 594 | WP_000559568.1 | phage N-6-adenine-methyltransferase | - |
| JR901_RS24425 () | 95419..96228 | - | 810 | WP_053902537.1 | hypothetical protein | - |
| JR901_RS24430 () | 96387..96944 | - | 558 | WP_063502066.1 | 3'-5' exonuclease | - |
| JR901_RS24435 () | 96954..97373 | - | 420 | WP_001718079.1 | hypothetical protein | - |
| JR901_RS24440 () | 97435..98079 | - | 645 | WP_000386469.1 | AAA family ATPase | - |
| JR901_RS24445 () | 98079..98555 | - | 477 | WP_000781810.1 | dihydrofolate reductase | - |
| JR901_RS24450 () | 98552..98953 | - | 402 | WP_000289389.1 | hypothetical protein | - |
| JR901_RS24455 () | 98967..100070 | - | 1104 | WP_024175984.1 | thymidylate synthase | - |
| JR901_RS24460 () | 100242..101111 | - | 870 | WP_001011861.1 | hypothetical protein | - |
| JR901_RS24465 () | 101189..102331 | - | 1143 | WP_000122502.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| JR901_RS24470 () | 102438..104753 | - | 2316 | WP_000623683.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| JR901_RS24475 () | 104827..105396 | - | 570 | WP_000037962.1 | hypothetical protein | - |
| JR901_RS24480 () | 105406..106149 | - | 744 | WP_000008655.1 | hypothetical protein | - |
| JR901_RS24485 () | 106139..108055 | - | 1917 | WP_001404451.1 | AAA family ATPase | - |
| JR901_RS24490 () | 108285..109370 | - | 1086 | WP_000174805.1 | metallophosphoesterase | - |
| JR901_RS24495 () | 109625..110269 | - | 645 | WP_000364573.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|