MGE detailed information
MGE type: Genomic_island MGE length: 34257 bp
Accession: NZ_CP070906 Location: 820123..854379 Organism: Escherichia coli strain 88COLEC Replicon: chromosome
Accession: NZ_CP070906 Location: 820123..854379 Organism: Escherichia coli strain 88COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR901_RS03850 () | 815165..815728 | + | 564 | WP_001613816.1 | type II secretion system minor pseudopilin GspH | - |
| JR901_RS03855 () | 815725..816096 | + | 372 | WP_021557199.1 | type II secretion system minor pseudopilin GspI | - |
| JR901_RS03860 () | 816093..816698 | + | 606 | WP_021557198.1 | type II secretion system minor pseudopilin GspJ | - |
| JR901_RS03865 () | 816695..817672 | + | 978 | WP_021557197.1 | type II secretion system minor pseudopilin GspK | - |
| JR901_RS03870 () | 817669..818847 | + | 1179 | WP_021557196.1 | type II secretion system protein GspL | - |
| JR901_RS03875 () | 818849..819385 | + | 537 | WP_000942790.1 | GspM family type II secretion system protein YghD | - |
| JR901_RS03880 () | 819800..820126 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JR901_RS03885 () | 820123..820386 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JR901_RS03890 () | 820458..821324 | - | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| JR901_RS03895 () | 821409..821606 | - | 198 | WP_061355066.1 | DUF957 domain-containing protein | - |
| JR901_RS03900 () | 821618..822106 | - | 489 | WP_205899091.1 | hypothetical protein | - |
| JR901_RS03905 () | 822103..822480 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| JR901_RS03910 () | 822527..822901 | - | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JR901_RS03915 () | 822981..823202 | - | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| JR901_RS03920 () | 823265..823741 | - | 477 | WP_001366855.1 | RadC family protein | - |
| JR901_RS03925 () | 823757..824236 | - | 480 | WP_000844100.1 | antirestriction protein | - |
| JR901_RS03930 () | 824318..825136 | - | 819 | WP_001175148.1 | DUF945 domain-containing protein | - |
| JR901_RS03935 () | 825226..825459 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| JR901_RS03940 () | 825465..826142 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| JR901_RS03945 () | 826290..826970 | - | 681 | WP_001282921.1 | WYL domain-containing protein | - |
| JR901_RS03950 () | 827173..828057 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| JR901_RS03955 () | 828163..829101 | + | 939 | WP_180492241.1 | hypothetical protein | - |
| JR901_RS03960 () | 829098..829907 | - | 810 | WP_023155731.1 | hypothetical protein | - |
| JR901_RS03965 () | 830349..831046 | - | 698 | Protein_779 | IS1 family transposase IS1R | Transposase |
| JR901_RS03970 () | 831102..831583 | - | 482 | Protein_780 | IS1 family transposase IS1A | Transposase |
| JR901_RS03975 () | 831826..832608 | - | 783 | Protein_781 | sodium/glutamate symporter | - |
| JR901_RS03980 () | 832623..833831 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| JR901_RS03985 () | 834167..834396 | - | 230 | Protein_783 | integrase | - |
| JR901_RS03990 () | 834575..835312 | + | 738 | WP_205899092.1 | outer membrane beta-barrel protein | - |
| JR901_RS03995 () | 835732..836628 | + | 897 | WP_072651053.1 | WYL domain-containing protein | - |
| JR901_RS04000 () | 836677..837756 | + | 1080 | WP_205899093.1 | chemotaxis protein | - |
| JR901_RS04005 () | 837803..839374 | + | 1572 | WP_001100175.1 | ATP--cob(I)alamin adenosyltransferase | - |
| JR901_RS04010 () | 839777..839974 | + | 198 | WP_001238009.1 | hypothetical protein | - |
| JR901_RS04015 () | 840027..841700 | + | 1674 | WP_024179174.1 | phosphoethanolamine transferase | - |
| JR901_RS04020 () | 841844..842176 | - | 333 | Protein_790 | tetratricopeptide repeat protein | - |
| JR901_RS04025 () | 842410..843945 | + | 1536 | WP_023181050.1 | IS21 family transposase ISSso4 | Transposase |
| JR901_RS04030 () | 843962..844717 | + | 756 | WP_001282653.1 | IS21 family transposase ISSso4 | Transposase |
| JR901_RS04035 () | 844714..844815 | - | 102 | Protein_793 | pcar domain protein | - |
| JR901_RS04040 () | 844813..845523 | - | 711 | Protein_794 | tetratricopeptide repeat protein | - |
| JR901_RS04045 () | 845573..845934 | + | 362 | Protein_795 | IS1 family transposase IS1A | Transposase |
| JR901_RS04050 () | 845923..846210 | + | 288 | Protein_796 | transposase | - |
| JR901_RS04055 () | 846788..848182 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| JR901_RS04060 () | 848377..849810 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| JR901_RS04065 () | 849807..851084 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| JR901_RS04070 () | 851147..853273 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| JR901_RS04075 () | 853369..854379 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| JR901_RS04080 () | 854529..855713 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| JR901_RS04090 () | 856071..856778 | - | 708 | WP_021557195.1 | DUF554 domain-containing protein | - |
| JR901_RS04095 () | 857177..859312 | + | 2136 | WP_001383513.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|