MGE detailed information
MGE type: Prophage MGE length: 47303 bp
Accession: NZ_CP070902 Location: 3646950..3694252 Organism: Escherichia coli strain 99COLEC Replicon: chromosome
Accession: NZ_CP070902 Location: 3646950..3694252 Organism: Escherichia coli strain 99COLEC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JR895_RS17495 () | 3643452..3645095 | + | 1644 | WP_086586080.1 | fimbrial adhesin EcpD | - |
| JR895_RS17500 () | 3645064..3645774 | + | 711 | WP_001301243.1 | fimbrial chaperone EcpE | - |
| JR895_RS17505 () | 3646087..3646416 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| JR895_RS17510 () | 3646546..3647243 | + | 698 | Protein_3419 | IS1 family transposase | - |
| JR895_RS17515 () | 3647578..3651120 | + | 3543 | WP_086586434.1 | hypothetical protein | - |
| JR895_RS17520 () | 3651467..3651595 | - | 129 | Protein_3421 | helix-turn-helix domain-containing protein | - |
| JR895_RS17525 () | 3651680..3652225 | + | 546 | WP_001026781.1 | serine acetyltransferase | - |
| JR895_RS17530 () | 3652236..3652808 | - | 573 | WP_089518730.1 | tail fiber assembly protein | - |
| JR895_RS17535 () | 3652808..3654376 | - | 1569 | WP_086586442.1 | terminase small subunit | - |
| JR895_RS17540 () | 3654765..3654998 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| JR895_RS17545 () | 3655055..3655465 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| JR895_RS17550 () | 3656144..3656632 | - | 489 | WP_086586439.1 | GIY-YIG nuclease family protein | - |
| JR895_RS17555 () | 3656838..3657296 | - | 459 | WP_001408742.1 | lysis protein | - |
| JR895_RS17560 () | 3657293..3657790 | - | 498 | WP_001135256.1 | lysozyme | - |
| JR895_RS17565 () | 3657790..3658005 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| JR895_RS17570 () | 3658579..3659661 | + | 1083 | WP_000737263.1 | porin OmpD | - |
| JR895_RS17575 () | 3659850..3660233 | - | 384 | WP_001204780.1 | antitermination protein QuuD | - |
| JR895_RS17580 () | 3660319..3660459 | - | 141 | WP_001393963.1 | YlcG family protein | - |
| JR895_RS17585 () | 3660456..3660818 | - | 363 | WP_001099712.1 | crossover junction endodeoxyribonuclease RusA | - |
| JR895_RS17590 () | 3660815..3661105 | - | 291 | WP_032176362.1 | DUF1364 domain-containing protein | - |
| JR895_RS17595 () | 3661098..3661268 | - | 171 | WP_000224907.1 | hypothetical protein | - |
| JR895_RS17600 () | 3661268..3661723 | - | 456 | WP_032176363.1 | DNA base-flipping protein YbcN | - |
| JR895_RS17605 () | 3661720..3661821 | - | 102 | WP_072186465.1 | hypothetical protein | - |
| JR895_RS17610 () | 3661918..3662169 | - | 252 | WP_167813973.1 | hypothetical protein | - |
| JR895_RS17615 () | 3662663..3662986 | - | 324 | WP_032176365.1 | hypothetical protein | - |
| JR895_RS17620 () | 3663098..3664624 | - | 1527 | WP_086586372.1 | hypothetical protein ; Integrase | Integrase |
| JR895_RS17625 () | 3664682..3664833 | - | 152 | Protein_3442 | hypothetical protein | - |
| JR895_RS17630 () | 3664882..3665214 | - | 333 | WP_086586370.1 | SMR family multidrug efflux protein EmrE | - |
| JR895_RS17635 () | 3665282..3665584 | - | 303 | WP_000145915.1 | protein ren | - |
| JR895_RS17640 () | 3665581..3665661 | - | 81 | Protein_3445 | Replication protein P | - |
| JR895_RS17645 () | 3665796..3666959 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JR895_RS17650 () | 3667164..3668135 | + | 972 | WP_170386723.1 | IS30 family transposase ISApl1 | Transposase |
| JR895_RS17655 () | 3668183..3669256 | + | 1074 | WP_053275266.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JR895_RS17660 () | 3669267..3670196 | + | 930 | WP_053275265.1 | hypothetical protein | - |
| JR895_RS17665 () | 3670264..3670491 | - | 228 | WP_001403510.1 | hypothetical protein | - |
| JR895_RS17670 () | 3670561..3671946 | - | 1386 | WP_205897068.1 | P-type conjugative transfer protein TrbL | - |
| JR895_RS17675 () | 3672131..3672925 | - | 795 | WP_053275263.1 | P-type conjugative transfer protein TrbJ | - |
| JR895_RS17680 () | 3672980..3673339 | - | 360 | WP_053275262.1 | conjugal transfer transcriptional regulator TraJ | - |
| JR895_RS17685 () | 3673626..3673895 | - | 270 | WP_024202049.1 | hypothetical protein | - |
| JR895_RS17690 () | 3674857..3675126 | + | 270 | WP_071606680.1 | HigA family addiction module antidote protein | - |
| JR895_RS17695 () | 3675210..3675992 | - | 783 | WP_024202048.1 | TIGR02646 family protein | - |
| JR895_RS17700 () | 3675970..3677598 | - | 1629 | WP_024202047.1 | AAA family ATPase | - |
| JR895_RS17705 () | 3677599..3678537 | - | 939 | WP_001403504.1 | retron St85 family RNA-directed DNA polymerase | - |
| JR895_RS17715 () | 3679179..3680432 | - | 1254 | WP_000893279.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JR895_RS17720 () | 3680444..3681547 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JR895_RS17725 () | 3681835..3682890 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JR895_RS17730 () | 3682929..3683330 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| JR895_RS17735 () | 3683388..3684632 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3684048..3684128 | - | 81 | NuclAT_9 | - | - |
| - () | 3684048..3684128 | - | 81 | NuclAT_9 | - | - |
| - () | 3684048..3684128 | - | 81 | NuclAT_9 | - | - |
| - () | 3684048..3684128 | - | 81 | NuclAT_9 | - | - |
| JR895_RS17740 () | 3684724..3685182 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JR895_RS17745 () | 3685443..3686900 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| JR895_RS17750 () | 3686957..3687478 | - | 522 | Protein_3466 | peptide chain release factor H | - |
| JR895_RS17755 () | 3687477..3687680 | - | 204 | Protein_3467 | RNA ligase RtcB family protein | - |
| JR895_RS17760 () | 3687926..3688378 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JR895_RS17765 () | 3688388..3688786 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JR895_RS17770 () | 3688789..3689082 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JR895_RS17775 () | 3689134..3690189 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JR895_RS17780 () | 3690260..3691045 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| JR895_RS17785 () | 3691017..3692729 | + | 1713 | Protein_3473 | Flagellar biosynthesis protein FlhA | VF |
| JR895_RS17790 () | 3692953..3693450 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| JR895_RS17795 () | 3693626..3694399 | - | 774 | WP_015675129.1 | Murein DD-endopeptidase MepH | VF |
| JR895_RS17800 () | 3694585..3694845 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| JR895_RS17805 () | 3694848..3695126 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| JR895_RS17810 () | 3695282..3696022 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| JR895_RS17815 () | 3695993..3696760 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| JR895_RS17820 () | 3696966..3697544 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|