MGE detailed information
MGE type: Conjugative plasmid MGE length: 136763 bp
Accession: NZ_CP070900 Location: 1..136763 Organism: Klebsiella pneumoniae strain JNQH116 Replicon: plasmid pJNQH116-2
Accession: NZ_CP070900 Location: 1..136763 Organism: Klebsiella pneumoniae strain JNQH116 Replicon: plasmid pJNQH116-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYA99_RS26500 () | 19..894 | + | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| JYA99_RS26505 () | 1559..2185 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| JYA99_RS26510 () | 2305..2484 | + | 180 | WP_006788217.1 | hypothetical protein | - |
| JYA99_RS26515 () | 2956..3750 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| JYA99_RS26520 () | 3948..4964 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| JYA99_RS26525 () | 4975..5289 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| JYA99_RS26530 () | 5316..5711 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| JYA99_RS26535 () | 5880..6185 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JYA99_RS26540 () | 6187..6405 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JYA99_RS26545 () | 7223..7513 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| JYA99_RS26550 () | 7510..8637 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| JYA99_RS26555 () | 8671..10263 | - | 1593 | WP_015344964.1 | hypothetical protein | - |
| JYA99_RS26560 () | 10470..11249 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| JYA99_RS26565 () | 11262..11762 | - | 501 | WP_013023779.1 | hypothetical protein | - |
| JYA99_RS26570 () | 12037..12300 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| JYA99_RS26575 () | 12297..12863 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| JYA99_RS26580 () | 12894..13388 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| JYA99_RS26585 () | 13432..13800 | + | 369 | WP_015344965.1 | hypothetical protein | - |
| JYA99_RS26590 () | 13834..14037 | + | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| JYA99_RS26595 () | 14086..14343 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| JYA99_RS26600 () | 14419..14673 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| JYA99_RS26605 () | 14809..15585 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| JYA99_RS26610 () | 15826..16149 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| JYA99_RS26615 () | 16328..16597 | - | 270 | Protein_23 | SOS response-associated peptidase family protein | - |
| JYA99_RS26620 () | 16733..16900 | + | 168 | Protein_24 | IS5 family transposase IS903 | Transposase |
| JYA99_RS26625 () | 16956..17105 | + | 150 | Protein_25 | IS110 family transposase | - |
| JYA99_RS26630 () | 17388..18569 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| JYA99_RS26635 () | 19761..20618 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| JYA99_RS26640 () | 20611..20688 | - | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| JYA99_RS26645 () | 20920..21189 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| JYA99_RS26650 () | 21307..21786 | - | 480 | WP_014343478.1 | Phospholipase D | VF |
| JYA99_RS26655 () | 21990..23567 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| JYA99_RS26660 () | 23891..24595 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JYA99_RS26665 () | 24650..25693 | + | 1044 | Protein_33 | type II site-specific deoxyribonuclease | - |
| JYA99_RS26670 () | 25727..27130 | - | 1404 | WP_072094655.1 | DNA cytosine methyltransferase | - |
| JYA99_RS26675 () | 27259..27531 | + | 273 | Protein_35 | IS1 family transposase IS1X2 | Transposase |
| JYA99_RS26680 () | 27542..27748 | - | 207 | WP_001749967.1 | hypothetical protein | - |
| JYA99_RS26685 () | 27753..28394 | - | 642 | WP_001749966.1 | restriction endonuclease | - |
| JYA99_RS26690 () | 28450..28761 | - | 312 | WP_001452736.1 | hypothetical protein | - |
| JYA99_RS26695 () | 28797..29111 | - | 315 | WP_001749965.1 | KikA protein | - |
| JYA99_RS26700 () | 29108..29452 | - | 345 | WP_001749964.1 | hypothetical protein | - |
| JYA99_RS26705 () | 29468..29818 | - | 351 | WP_024129965.1 | H-NS histone family protein | - |
| JYA99_RS26710 () | 29882..30616 | + | 735 | WP_001749963.1 | Type IV secretion system protein virB1 | VF |
| JYA99_RS26715 () | 30625..30906 | + | 282 | WP_000440698.1 | hypothetical protein | - |
| JYA99_RS26720 () | 30916..31209 | + | 294 | WP_001749962.1 | hypothetical protein | - |
| JYA99_RS26725 () | 31259..31576 | + | 318 | WP_000496058.1 | hypothetical protein | VF |
| JYA99_RS26730 () | 31576..34176 | + | 2601 | WP_001749961.1 | Type IV secretion system protein virB4 | VF |
| JYA99_RS26735 () | 34194..34907 | + | 714 | WP_001749960.1 | Type IV secretion system protein virB5 | VF |
| JYA99_RS26740 () | 34915..35142 | + | 228 | WP_001749959.1 | IncN-type entry exclusion lipoprotein EexN | - |
| JYA99_RS26745 () | 35158..36198 | + | 1041 | WP_001749958.1 | type IV secretion system protein | - |
| JYA99_RS26750 () | 36417..37115 | + | 699 | WP_000646594.1 | Type IV secretion system protein virB8 | VF |
| JYA99_RS26755 () | 37126..38010 | + | 885 | WP_000735066.1 | Type IV secretion system protein virB9 | VF |
| JYA99_RS26760 () | 38010..39170 | + | 1161 | WP_000101710.1 | Protein virB10 | VF |
| JYA99_RS26765 () | 39212..40207 | + | 996 | WP_000128596.1 | Type IV secretion system protein VirB11 | VF |
| JYA99_RS26770 () | 40207..40740 | + | 534 | WP_000792636.1 | Phospholipase D | VF |
| JYA99_RS26775 () | 40914..41042 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| JYA99_RS26780 () | 41468..41647 | + | 180 | Protein_56 | helix-turn-helix transcriptional regulator | - |
| JYA99_RS26785 () | 41712..42416 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JYA99_RS26790 () | 42470..43101 | - | 632 | Protein_58 | transposase | - |
| JYA99_RS26795 () | 43496..44152 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| JYA99_RS26800 () | 44471..45085 | - | 615 | WP_014839983.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| JYA99_RS26805 () | 45247..45429 | + | 183 | Protein_61 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| JYA99_RS26810 () | 45520..46110 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| JYA99_RS26815 () | 46247..46819 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| JYA99_RS26820 () | 46856..48252 | + | 1397 | Protein_64 | ISKra4 family transposase ISKpn19 | Transposase |
| JYA99_RS26825 () | 48285..49544 | - | 1260 | Protein_65 | 60 kDa chaperonin | VF |
| JYA99_RS26830 () | 49600..49890 | - | 291 | WP_004201172.1 | co-chaperone GroES | - |
| JYA99_RS26835 () | 50084..50413 | + | 330 | WP_004201171.1 | divalent-cation tolerance protein CutA | - |
| JYA99_RS26840 () | 50418..51449 | + | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| JYA99_RS26845 () | 51460..52098 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| JYA99_RS26850 () | 52103..52468 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| JYA99_RS26855 () | 52472..53284 | - | 813 | WP_004201164.1 | Metallo-beta-lactamase type 2 | ARG |
| JYA99_RS26860 () | 53385..53636 | - | 252 | Protein_72 | IS30 family transposase | - |
| JYA99_RS26865 () | 53713..56730 | - | 3018 | WP_021740570.1 | Tn3 family transposase TnpA_IS3000 | Transposase |
| JYA99_RS26870 () | 56872..57297 | - | 426 | Protein_74 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| JYA99_RS26875 () | 57351..58055 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JYA99_RS26880 () | 58120..58374 | + | 255 | Protein_76 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JYA99_RS26885 () | 58432..58674 | + | 243 | WP_000844627.1 | transposase | - |
| JYA99_RS26890 () | 58706..59356 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JYA99_RS26895 () | 59462..60661 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JYA99_RS26900 () | 60693..61577 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| JYA99_RS26905 () | 61715..62122 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| JYA99_RS26910 () | 62111..63862 | + | 1752 | Protein_82 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JYA99_RS26915 () | 64015..66810 | - | 2796 | Protein_83 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JYA99_RS26920 () | 66824..67156 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| JYA99_RS26925 () | 67203..68078 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| JYA99_RS26930 () | 68334..69596 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| JYA99_RS26935 () | 69802..69996 | - | 195 | Protein_87 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JYA99_RS26940 () | 70160..70717 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JYA99_RS26945 () | 70900..71760 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| JYA99_RS26950 () | 71993..72301 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| JYA99_RS26955 () | 72298..72948 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| JYA99_RS26960 () | 73004..73648 | - | 645 | WP_014343481.1 | hypothetical protein | - |
| JYA99_RS26965 () | 73698..74300 | - | 603 | WP_013023836.1 | hypothetical protein | - |
| JYA99_RS26970 () | 74461..75054 | - | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| JYA99_RS26975 () | 75126..75851 | - | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| JYA99_RS26980 () | 75932..81193 | - | 5262 | WP_205733671.1 | Multifunctional conjugation protein TraI | Relaxase |
| JYA99_RS26985 () | 81193..83505 | - | 2313 | Protein_97 | type IV conjugative transfer system coupling protein TraD | - |
| JYA99_RS26990 () | 83632..84321 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| JYA99_RS26995 () | 84514..85245 | - | 732 | WP_013023830.1 | complement resistance protein TraT | - |
| JYA99_RS27000 () | 85431..85964 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| JYA99_RS27005 () | 85967..88816 | - | 2850 | WP_013609534.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JYA99_RS27010 () | 88816..90195 | - | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| JYA99_RS27015 () | 90173..90616 | - | 444 | WP_014343488.1 | F-type conjugal transfer protein TrbF | - |
| JYA99_RS27020 () | 90662..91219 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JYA99_RS27025 () | 91191..91430 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JYA99_RS27030 () | 91441..92193 | - | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JYA99_RS27035 () | 92214..92540 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| JYA99_RS27040 () | 92553..92801 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| JYA99_RS27045 () | 92779..93033 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| JYA99_RS27050 () | 93065..95020 | - | 1956 | WP_013023827.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JYA99_RS27055 () | 95079..95717 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JYA99_RS27060 () | 95730..96719 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| JYA99_RS27065 () | 96716..97105 | - | 390 | WP_004194992.1 | hypothetical protein | - |
| JYA99_RS27070 () | 97147..97773 | - | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| JYA99_RS27075 () | 97773..98162 | - | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| JYA99_RS27080 () | 98162..100801 | - | 2640 | WP_013023824.1 | type IV secretion system protein TraC | - |
| JYA99_RS27085 () | 100873..101271 | - | 399 | WP_013609531.1 | hypothetical protein | - |
| JYA99_RS27090 () | 101647..102051 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| JYA99_RS27095 () | 102118..102429 | - | 312 | WP_015344986.1 | hypothetical protein | - |
| JYA99_RS27100 () | 102430..102648 | - | 219 | WP_015344987.1 | hypothetical protein | - |
| JYA99_RS27105 () | 102754..103164 | - | 411 | WP_009309869.1 | hypothetical protein | - |
| JYA99_RS27110 () | 103296..103880 | - | 585 | WP_009309868.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JYA99_RS27115 () | 103994..105418 | - | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| JYA99_RS27120 () | 105418..106158 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| JYA99_RS27125 () | 106145..106711 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| JYA99_RS27130 () | 106731..107036 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| JYA99_RS27135 () | 107050..107418 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| JYA99_RS27140 () | 107487..107687 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| JYA99_RS27145 () | 107773..108474 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| JYA99_RS27150 () | 108704..109096 | - | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| JYA99_RS27155 () | 109528..110013 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| JYA99_RS27160 () | 110046..110375 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| JYA99_RS27165 () | 110408..111229 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| JYA99_RS27170 () | 112037..113245 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| JYA99_RS27175 () | 113381..113794 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| JYA99_RS27180 () | 113795..114073 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| JYA99_RS27185 () | 114063..114383 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JYA99_RS27190 () | 114464..114688 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| JYA99_RS27195 () | 114699..114911 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| JYA99_RS27200 () | 114972..115328 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| JYA99_RS27205 () | 116170..116487 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| JYA99_RS27210 () | 116502..116852 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| JYA99_RS27215 () | 116849..117121 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| JYA99_RS27220 () | 117814..117972 | - | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| JYA99_RS27225 () | 118200..118574 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| JYA99_RS27230 () | 118630..118956 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| JYA99_RS27235 () | 118953..119681 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| JYA99_RS27240 () | 119678..120109 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| JYA99_RS27245 () | 120154..122211 | - | 2058 | WP_065519831.1 | ParB/RepB/Spo0J family partition protein | - |
| JYA99_RS27250 () | 122281..122529 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| JYA99_RS27255 () | 122578..123120 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| JYA99_RS27260 () | 123950..124513 | - | 564 | WP_004152756.1 | methyltransferase | - |
| JYA99_RS27265 () | 124561..125916 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| JYA99_RS27270 () | 125968..126198 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| JYA99_RS27275 () | 126290..126517 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| JYA99_RS27280 () | 127197..127517 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| JYA99_RS27285 () | 127552..127806 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| JYA99_RS27290 () | 127994..128185 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| JYA99_RS27295 () | 128228..128734 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| JYA99_RS27300 () | 128777..129205 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| JYA99_RS27305 () | 129886..130653 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| JYA99_RS27310 () | 130707..131126 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| JYA99_RS27315 () | 131136..131357 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| JYA99_RS27320 () | 131357..132058 | - | 702 | WP_001568041.1 | DNA methylase | - |
| JYA99_RS27325 () | 132495..132725 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| JYA99_RS27330 () | 132789..133460 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| JYA99_RS27335 () | 133463..134434 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| JYA99_RS27340 () | 134668..135099 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JYA99_RS27345 () | 135099..136370 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|