MGE detailed information
MGE type: IScluster/Tn MGE length: 8923 bp
Accession: NZ_CP070507 Location: 89801..98723 Organism: Pseudomonas sp. SDM007 Replicon: plasmid pSDM007
Accession: NZ_CP070507 Location: 89801..98723 Organism: Pseudomonas sp. SDM007 Replicon: plasmid pSDM007
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTY93_RS27950 () | 86423..89149 | - | 2727 | Protein_104 | translocation/assembly module TamB | - |
| JTY93_RS27955 () | 89146..89748 | - | 603 | Protein_105 | autotransporter assembly complex protein TamA | - |
| JTY93_RS27960 () | 89801..90505 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JTY93_RS27965 () | 90571..92538 | - | 1968 | Protein_107 | Tn3 family transposase ISPsy42 | Transposase |
| JTY93_RS27970 () | 92522..93124 | - | 603 | WP_010465829.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| JTY93_RS27975 () | 93316..93693 | + | 378 | WP_042933781.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JTY93_RS27980 () | 93674..94009 | + | 336 | WP_001172026.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| JTY93_RS27985 () | 94024..94359 | + | 336 | WP_000741275.1 | hypothetical protein | - |
| JTY93_RS27990 () | 94383..94709 | + | 327 | WP_000091614.1 | hypothetical protein | - |
| JTY93_RS27995 () | 94706..95086 | + | 381 | WP_001054412.1 | hypothetical protein | - |
| JTY93_RS28000 () | 95204..95545 | + | 342 | WP_205519058.1 | DUF3391 domain-containing protein | - |
| JTY93_RS28005 () | 95584..96498 | + | 915 | WP_001736514.1 | HD domain-containing protein | - |
| JTY93_RS28010 () | 96665..98023 | - | 1359 | Protein_116 | IS66 family transposase ISPpu30 | Transposase |
| JTY93_RS28015 () | 98074..98409 | - | 336 | WP_076965119.1 | IS66 family transposase ISSal1 | Transposase |
| JTY93_RS28020 () | 98406..98723 | - | 318 | WP_076965118.1 | IS66 family transposase ISPpu14 | Transposase |
| JTY93_RS28025 () | 98976..101477 | - | 2502 | WP_076965117.1 | Hsp70 family protein | - |
| JTY93_RS28030 () | 101474..101827 | - | 354 | WP_076965116.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|