MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 55979 bp
Accession: NZ_CP070371 Location: 517077..573055 Organism: Paracoccus sp. H4-D09 Replicon: chromosome
Accession: NZ_CP070371 Location: 517077..573055 Organism: Paracoccus sp. H4-D09 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JWJ88_RS15710 () | 512103..512921 | + | 819 | WP_205296643.1 | transglycosylase SLT domain-containing protein | - |
| JWJ88_RS15715 () | 512969..513550 | + | 582 | WP_205296644.1 | hypothetical protein | - |
| JWJ88_RS15720 () | 513667..514005 | - | 339 | WP_205296645.1 | DUF1801 domain-containing protein | - |
| JWJ88_RS15725 () | 514442..516181 | + | 1740 | WP_205296646.1 | DUF3363 domain-containing protein | - |
| JWJ88_RS15730 () | 516290..516541 | + | 252 | WP_205296647.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| JWJ88_RS15735 () | 516545..516982 | + | 438 | WP_205296648.1 | PIN domain-containing protein | - |
| JWJ88_RS15740 () | 517156..519180 | + | 2025 | WP_205296875.1 | Conjugal transfer protein TraG | VF |
| JWJ88_RS15745 () | 519184..519603 | + | 420 | WP_205296649.1 | CopG family transcriptional regulator | - |
| JWJ88_RS15750 () | 519897..520784 | + | 888 | WP_205296650.1 | Hca operon transcriptional activator HcaR | VF |
| JWJ88_RS15755 () | 520973..521674 | + | 702 | WP_205296651.1 | Putative conjugal transfer protein | VF |
| JWJ88_RS15760 () | 521671..522003 | + | 333 | WP_205296652.1 | TrbC/VirB2 family protein | - |
| JWJ88_RS15765 () | 522003..522284 | + | 282 | WP_205296653.1 | VirB3 family type IV secretion system protein | - |
| JWJ88_RS15770 () | 522297..524807 | + | 2511 | WP_205296654.1 | conjugal transfer protein TrbE | - |
| JWJ88_RS15775 () | 524804..525601 | + | 798 | WP_205296655.1 | P-type conjugative transfer protein TrbJ | - |
| JWJ88_RS15780 () | 525621..525917 | + | 297 | WP_205296656.1 | putative entry exclusion protein TrbK-alt | - |
| JWJ88_RS15785 () | 525923..527278 | + | 1356 | WP_205296657.1 | P-type conjugative transfer protein TrbL | - |
| JWJ88_RS15790 () | 527278..527967 | + | 690 | WP_205296658.1 | conjugal transfer protein TrbF | - |
| JWJ88_RS15795 () | 527964..528944 | + | 981 | WP_205296659.1 | Type IV secretion system protein PtlF | VF |
| JWJ88_RS15800 () | 528941..530104 | + | 1164 | WP_205296660.1 | Type IV secretion system protein virB10 | VF |
| JWJ88_RS15805 () | 530109..530351 | + | 243 | WP_205296661.1 | DUF2274 domain-containing protein | - |
| JWJ88_RS15810 () | 530326..530877 | + | 552 | WP_205296930.1 | IS21 family transposase ISSme2 | Transposase |
| JWJ88_RS15815 () | 531216..531512 | + | 297 | WP_205296662.1 | hypothetical protein | - |
| JWJ88_RS15820 () | 531651..533174 | + | 1524 | WP_205296663.1 | DUF305 domain-containing protein | - |
| JWJ88_RS15825 () | 533219..533491 | - | 273 | WP_205296664.1 | IS3 family transposase ISMlo4 | Transposase |
| JWJ88_RS15830 () | 533488..533817 | - | 330 | WP_205296665.1 | IS3 family transposase ISMlo4 | Transposase |
| JWJ88_RS15835 () | 533814..534110 | - | 297 | WP_205296666.1 | IS3 family transposase ISMlo4 | Transposase |
| JWJ88_RS15840 () | 534216..534821 | + | 606 | Protein_536 | IS110 family transposase ISMdi12 | Transposase |
| JWJ88_RS15845 () | 535264..536268 | + | 1005 | WP_205296876.1 | hypothetical protein | - |
| JWJ88_RS15850 () | 536425..536970 | - | 546 | WP_205296667.1 | hypothetical protein | - |
| JWJ88_RS15855 () | 537018..538373 | - | 1356 | WP_205296668.1 | hypothetical protein | - |
| JWJ88_RS15860 () | 538370..539539 | - | 1170 | WP_205296669.1 | YcaO-like family protein | - |
| JWJ88_RS15865 () | 539587..540063 | - | 477 | WP_205296670.1 | GNAT family N-acetyltransferase | - |
| JWJ88_RS15870 () | 540166..541956 | + | 1791 | WP_205296671.1 | tetratricopeptide repeat protein | - |
| JWJ88_RS15875 () | 542123..544114 | + | 1992 | Protein_543 | PhoX family phosphatase | - |
| JWJ88_RS15880 () | 544167..544805 | + | 639 | WP_205296877.1 | hypothetical protein | - |
| JWJ88_RS15885 () | 544815..545294 | + | 480 | WP_205296672.1 | VOC family protein | - |
| JWJ88_RS15890 () | 545281..547398 | + | 2118 | WP_205296673.1 | hypothetical protein | - |
| JWJ88_RS15895 () | 547587..548502 | - | 916 | Protein_547 | dihydrodipicolinate synthase family protein | - |
| JWJ88_RS15900 () | 548570..549501 | - | 932 | Protein_548 | IS5 family transposase | - |
| JWJ88_RS15905 () | 549549..549692 | + | 144 | WP_205296674.1 | DUF4167 domain-containing protein | - |
| JWJ88_RS15910 () | 549662..549986 | + | 325 | Protein_550 | hypothetical protein | - |
| JWJ88_RS15915 () | 549989..550198 | + | 210 | WP_205296675.1 | DUF2274 domain-containing protein | - |
| JWJ88_RS15920 () | 550267..551274 | + | 1008 | WP_205296676.1 | hypothetical protein | - |
| JWJ88_RS15925 () | 551268..552032 | + | 765 | WP_205296677.1 | hypothetical protein | - |
| JWJ88_RS15930 () | 552029..552691 | + | 663 | WP_205296678.1 | hypothetical protein | - |
| JWJ88_RS15935 () | 553017..554225 | - | 1209 | WP_205296878.1 | RNA polymerase subunit sigma-54 | - |
| JWJ88_RS15940 () | 554318..555331 | + | 1014 | WP_205296679.1 | NAD(+)/NADH kinase | - |
| JWJ88_RS15945 () | 555351..556331 | + | 981 | WP_205296680.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| JWJ88_RS15950 () | 556345..557352 | + | 1008 | WP_205296681.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| JWJ88_RS15955 () | 557354..558457 | + | 1104 | WP_205296682.1 | acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | - |
| JWJ88_RS15960 () | 558511..559299 | + | 789 | WP_205296683.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
| JWJ88_RS15965 () | 559296..559625 | + | 330 | WP_205296684.1 | carboxymuconolactone decarboxylase family protein | - |
| JWJ88_RS15970 () | 559637..560710 | + | 1074 | WP_205296685.1 | zinc-binding dehydrogenase | - |
| JWJ88_RS15975 () | 560792..562648 | + | 1857 | WP_205296686.1 | Acetoin catabolism regulatory protein | VF |
| JWJ88_RS15980 () | 563076..564020 | + | 945 | WP_205296687.1 | IS110 family transposase ISMdi9 | Transposase |
| JWJ88_RS15985 () | 564544..565044 | + | 501 | Protein_565 | IS3 family transposase IS1133 | Transposase |
| JWJ88_RS15990 () | 565035..565484 | - | 450 | WP_205296931.1 | hypothetical protein | - |
| JWJ88_RS15995 () | 565481..565909 | - | 429 | WP_205296688.1 | hypothetical protein | - |
| JWJ88_RS16000 () | 565906..568536 | - | 2631 | WP_205296689.1 | hypothetical protein | - |
| JWJ88_RS16005 () | 568533..569102 | - | 570 | WP_205296690.1 | phage tail length tape measure family protein | - |
| JWJ88_RS16010 () | 569410..569990 | + | 581 | Protein_570 | hypothetical protein | - |
| JWJ88_RS16015 () | 570235..571973 | + | 1739 | Protein_571 | DUF3363 domain-containing protein | - |
| JWJ88_RS16020 () | 571980..572309 | - | 330 | WP_205296691.1 | hypothetical protein | - |
| JWJ88_RS16025 () | 572326..572697 | - | 372 | WP_205296692.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JWJ88_RS16030 () | 572697..572888 | - | 192 | WP_205296693.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| JWJ88_RS16035 () | 573094..573511 | + | 418 | Protein_575 | conjugal transfer protein TraG | - |
| JWJ88_RS16045 () | 574843..575412 | + | 570 | WP_205296695.1 | hypothetical protein | - |
| JWJ88_RS16050 () | 575899..576625 | + | 727 | Protein_578 | TrbI/VirB10 family protein | - |
| JWJ88_RS16055 () | 576614..576967 | - | 354 | Protein_579 | helix-turn-helix domain-containing protein | - |
| JWJ88_RS16060 () | 577055..577963 | - | 909 | WP_205296696.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|