MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120691 bp
Accession: NZ_CP070282 Location: 1..120691 Organism: Escherichia albertii strain Sample 170 Replicon: plasmid pESA135_1
Accession: NZ_CP070282 Location: 1..120691 Organism: Escherichia albertii strain Sample 170 Replicon: plasmid pESA135_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JRC42_RS25275 | 397..588 | + | 192 | Protein_1 | hypothetical protein | - |
| JRC42_RS23345 (JRC42_23345) | 604..1185 | + | 582 | WP_223602139.1 | DUF2971 domain-containing protein | - |
| JRC42_RS25280 | 1221..1448 | + | 228 | WP_244259624.1 | hypothetical protein | - |
| JRC42_RS25285 | 1557..1961 | + | 405 | WP_244259625.1 | abortive infection family protein | - |
| JRC42_RS23355 (JRC42_23355) | 2109..3240 | - | 1132 | Protein_5 | DUF3800 domain-containing protein | - |
| JRC42_RS23360 (JRC42_23360) | 3492..3746 | + | 255 | WP_204620300.1 | hypothetical protein | - |
| JRC42_RS23365 (JRC42_23365) | 3746..4336 | + | 591 | WP_204620301.1 | hypothetical protein | - |
| JRC42_RS23370 (JRC42_23370) | 4599..6155 | + | 1557 | WP_000818361.1 | AAA family ATPase | - |
| JRC42_RS23375 (JRC42_23375) | 6350..6967 | + | 618 | WP_204620302.1 | ProQ/FINO family protein | - |
| JRC42_RS23380 (JRC42_23380) | 7154..8128 | - | 975 | Protein_10 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JRC42_RS23385 (JRC42_23385) | 8321..8896 | + | 576 | WP_204620303.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| JRC42_RS23390 (JRC42_23390) | 8925..11315 | + | 2391 | WP_204620304.1 | DEAD/DEAH box helicase family protein | - |
| JRC42_RS23395 (JRC42_23395) | 11337..14258 | + | 2922 | WP_204620305.1 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| JRC42_RS23400 (JRC42_23400) | 14294..14809 | - | 516 | Protein_14 | Tn3 family transposase | - |
| JRC42_RS23405 (JRC42_23405) | 14895..15314 | + | 420 | WP_204619039.1 | IS66 family transposase ISEc8 | Transposase |
| JRC42_RS23410 (JRC42_23410) | 15311..15658 | + | 348 | WP_204619037.1 | IS66 family transposase ISCro1 | Transposase |
| JRC42_RS23415 (JRC42_23415) | 15678..17249 | + | 1572 | WP_204619034.1 | IS66 family transposase ISCro1 | Transposase |
| JRC42_RS23420 (JRC42_23420) | 17442..20363 | - | 2922 | WP_204620305.1 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| JRC42_RS23425 (JRC42_23425) | 20385..22775 | - | 2391 | WP_204620304.1 | DEAD/DEAH box helicase family protein | - |
| JRC42_RS23430 (JRC42_23430) | 22804..23379 | - | 576 | WP_204620303.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| JRC42_RS25560 | 23861..23956 | - | 96 | WP_000609149.1 | DinQ-like type I toxin DqlB | - |
| JRC42_RS23435 (JRC42_23435) | 24743..26245 | - | 1503 | WP_204620306.1 | hypothetical protein | - |
| JRC42_RS23440 (JRC42_23440) | 26827..27252 | - | 426 | WP_012300440.1 | hypothetical protein | - |
| JRC42_RS23445 (JRC42_23445) | 27394..27591 | + | 198 | WP_204620307.1 | hypothetical protein | - |
| JRC42_RS23450 (JRC42_23450) | 27797..27919 | + | 123 | Protein_25 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JRC42_RS25290 | 27976..28180 | - | 205 | Protein_26 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JRC42_RS23455 (JRC42_23455) | 28284..31397 | - | 3114 | WP_208629369.1 | Invasin | VF |
| JRC42_RS23460 (JRC42_23460) | 32735..33592 | - | 858 | WP_204620308.1 | incFII family plasmid replication initiator RepA | - |
| JRC42_RS23465 (JRC42_23465) | 33585..33659 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JRC42_RS23470 (JRC42_23470) | 33904..34152 | - | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| JRC42_RS23475 (JRC42_23475) | 34381..34760 | - | 380 | Protein_31 | DUF2726 domain-containing protein | - |
| JRC42_RS23480 (JRC42_23480) | 35059..35222 | - | 164 | Protein_32 | IS3 family transposase IS1203 | Transposase |
| JRC42_RS23485 (JRC42_23485) | 35348..35749 | - | 402 | WP_204620309.1 | type II secretion system pilot lipoprotein GspS | - |
| JRC42_RS23490 (JRC42_23490) | 35843..36559 | - | 717 | WP_244259629.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JRC42_RS23495 (JRC42_23495) | 36728..37243 | - | 516 | WP_204620311.1 | Type II secretion system protein M | VF |
| JRC42_RS23500 (JRC42_23500) | 37230..38507 | - | 1278 | WP_244259626.1 | Type II secretion system protein L | VF |
| JRC42_RS23505 (JRC42_23505) | 38441..39418 | - | 978 | WP_204620313.1 | Putative type II secretion system protein K | VF |
| JRC42_RS23510 (JRC42_23510) | 39415..40014 | - | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| JRC42_RS23515 (JRC42_23515) | 40011..40358 | - | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| JRC42_RS23520 (JRC42_23520) | 40373..40924 | - | 552 | WP_204620314.1 | type II secretion system minor pseudopilin GspH | - |
| JRC42_RS23525 (JRC42_23525) | 40921..41355 | - | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| JRC42_RS23530 (JRC42_23530) | 41386..42609 | - | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| JRC42_RS23535 (JRC42_23535) | 42611..44116 | - | 1506 | WP_204620316.1 | Type II secretion system protein E | VF |
| JRC42_RS23540 (JRC42_23540) | 44113..46083 | - | 1971 | WP_204620317.1 | Type II secretion system protein D | VF |
| JRC42_RS23545 (JRC42_23545) | 46084..46959 | - | 876 | WP_204678060.1 | Type II secretion system protein C | VF |
| JRC42_RS23550 (JRC42_23550) | 47043..49703 | - | 2661 | WP_204678059.1 | Metalloprotease StcE | VF |
| JRC42_RS23555 (JRC42_23555) | 50148..50415 | - | 268 | Protein_47 | IS3 family transposase | - |
| JRC42_RS23560 (JRC42_23560) | 50440..53414 | - | 2975 | Protein_48 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| JRC42_RS23565 (JRC42_23565) | 53582..54223 | + | 642 | WP_204620318.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JRC42_RS23570 (JRC42_23570) | 54210..56321 | - | 2112 | WP_244259627.1 | Multifunctional conjugation protein TraI | Relaxase |
| JRC42_RS23575 (JRC42_23575) | 56321..58510 | - | 2190 | WP_204620319.1 | type IV conjugative transfer system coupling protein TraD | - |
| JRC42_RS23580 (JRC42_23580) | 58643..58870 | + | 228 | WP_000450523.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| JRC42_RS23585 (JRC42_23585) | 58870..59268 | + | 399 | WP_204620320.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| JRC42_RS23590 (JRC42_23590) | 59285..59653 | - | 369 | WP_244259628.1 | DUF2726 domain-containing protein | - |
| JRC42_RS23595 (JRC42_23595) | 60121..60858 | - | 738 | WP_000926075.1 | conjugal transfer complement resistance protein TraT | - |
| JRC42_RS23600 (JRC42_23600) | 60930..61580 | - | 651 | WP_001744120.1 | hypothetical protein | - |
| JRC42_RS25295 | 61595..62755 | - | 1161 | WP_244259614.1 | hypothetical protein | - |
| JRC42_RS25300 | 62849..64504 | - | 1656 | WP_244259615.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| JRC42_RS23610 (JRC42_23610) | 64504..65910 | - | 1407 | WP_204620278.1 | conjugal transfer pilus assembly protein TraH | - |
| JRC42_RS23615 (JRC42_23615) | 65963..66550 | - | 588 | WP_204620279.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JRC42_RS23620 (JRC42_23620) | 66552..66824 | - | 273 | WP_204620280.1 | hypothetical protein | - |
| JRC42_RS23625 (JRC42_23625) | 66837..67169 | - | 333 | WP_001744127.1 | hypothetical protein | - |
| JRC42_RS23630 (JRC42_23630) | 67205..67990 | - | 786 | WP_061361226.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JRC42_RS23635 (JRC42_23635) | 67992..69926 | - | 1935 | WP_204678058.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JRC42_RS23640 (JRC42_23640) | 69923..70540 | - | 618 | WP_244259616.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JRC42_RS23645 (JRC42_23645) | 70568..71020 | - | 453 | WP_198114231.1 | hypothetical protein | - |
| JRC42_RS23650 (JRC42_23650) | 71010..71354 | - | 345 | WP_204620281.1 | hypothetical protein | - |
| JRC42_RS23655 (JRC42_23655) | 71431..72006 | - | 576 | WP_204620282.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JRC42_RS25305 | 72046..72369 | - | 324 | WP_244259617.1 | hypothetical protein | - |
| JRC42_RS25310 | 72370..72807 | - | 438 | WP_244259618.1 | hypothetical protein | - |
| JRC42_RS23665 (JRC42_23665) | 72864..73862 | - | 999 | WP_204620283.1 | conjugal transfer pilus assembly protein TraU | - |
| JRC42_RS23670 (JRC42_23670) | 73859..74254 | - | 396 | WP_204620284.1 | hypothetical protein | - |
| JRC42_RS23675 (JRC42_23675) | 74251..74868 | - | 618 | WP_204620285.1 | type-F conjugative transfer system protein TraW | - |
| JRC42_RS23680 (JRC42_23680) | 74865..75089 | - | 225 | WP_000752802.1 | TraR/DksA C4-type zinc finger protein | - |
| JRC42_RS23685 (JRC42_23685) | 75092..75508 | - | 417 | WP_204620286.1 | type-F conjugative transfer system protein TrbI | - |
| JRC42_RS23690 (JRC42_23690) | 75487..78126 | - | 2640 | WP_204678056.1 | type IV secretion system protein TraC | - |
| JRC42_RS23695 (JRC42_23695) | 78123..78635 | - | 513 | WP_204620287.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JRC42_RS23700 (JRC42_23700) | 78647..79981 | - | 1335 | WP_204620288.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JRC42_RS23705 (JRC42_23705) | 79974..80753 | - | 780 | WP_053272385.1 | type-F conjugative transfer system secretin TraK | - |
| JRC42_RS23710 (JRC42_23710) | 80728..81306 | - | 579 | WP_000365870.1 | type IV conjugative transfer system protein TraE | - |
| JRC42_RS23715 (JRC42_23715) | 81317..81616 | - | 300 | WP_001204091.1 | type IV conjugative transfer system protein TraL | - |
| JRC42_RS23720 (JRC42_23720) | 81647..82018 | - | 372 | WP_204620289.1 | type IV conjugative transfer system pilin TraA | - |
| JRC42_RS23725 (JRC42_23725) | 82317..82466 | - | 150 | WP_001401982.1 | TraY domain-containing protein | - |
| JRC42_RS23730 (JRC42_23730) | 82606..83370 | - | 765 | WP_204620290.1 | hypothetical protein | - |
| JRC42_RS23735 (JRC42_23735) | 83531..83926 | - | 396 | WP_204620291.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JRC42_RS23740 (JRC42_23740) | 84451..84900 | + | 450 | WP_096981906.1 | hypothetical protein | VF |
| JRC42_RS23745 (JRC42_23745) | 85178..85999 | - | 822 | WP_001234447.1 | DUF932 domain-containing protein | - |
| JRC42_RS23750 (JRC42_23750) | 86110..86406 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| JRC42_RS23755 (JRC42_23755) | 86430..86636 | - | 207 | WP_024165775.1 | hypothetical protein | - |
| JRC42_RS25315 | 86706..86876 | + | 171 | Protein_90 | hypothetical protein | - |
| JRC42_RS23760 (JRC42_23760) | 87498..89171 | + | 1674 | WP_204620421.1 | group II intron reverse transcriptase/maturase | - |
| JRC42_RS23765 (JRC42_23765) | 89536..89727 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| JRC42_RS23770 (JRC42_23770) | 89724..90146 | - | 423 | WP_204620292.1 | DUF1380 family protein | - |
| JRC42_RS23775 (JRC42_23775) | 90193..90618 | - | 426 | WP_244259619.1 | antirestriction protein | - |
| JRC42_RS23785 (JRC42_23785) | 91029..91253 | - | 225 | Protein_95 | hypothetical protein | - |
| JRC42_RS23790 (JRC42_23790) | 91299..91853 | - | 555 | WP_204620322.1 | DUF1380 family protein | - |
| JRC42_RS23795 (JRC42_23795) | 91747..91968 | - | 222 | WP_137469800.1 | hypothetical protein | - |
| JRC42_RS23800 (JRC42_23800) | 91969..92652 | - | 684 | WP_000086125.1 | DNA methylase | - |
| JRC42_RS23805 (JRC42_23805) | 92728..93033 | - | 306 | WP_204620293.1 | hypothetical protein | - |
| JRC42_RS23810 (JRC42_23810) | 93037..93453 | - | 417 | Protein_100 | hypothetical protein | - |
| JRC42_RS23815 (JRC42_23815) | 93376..94572 | + | 1197 | Protein_101 | translesion error-prone DNA polymerase V subunit UmuC | - |
| JRC42_RS23820 (JRC42_23820) | 94713..95675 | - | 963 | WP_147697683.1 | ParB family protein | - |
| JRC42_RS23825 (JRC42_23825) | 95672..96877 | - | 1206 | WP_000817642.1 | Plasmid partition protein A | VF |
| JRC42_RS23830 (JRC42_23830) | 97251..97463 | + | 213 | WP_204620323.1 | hypothetical protein | - |
| JRC42_RS23835 (JRC42_23835) | 97637..97888 | + | 252 | WP_204620294.1 | antitoxin | Antitoxin Detail |
| JRC42_RS23840 (JRC42_23840) | 97885..98172 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JRC42_RS23845 (JRC42_23845) | 98174..98299 | + | 126 | Protein_107 | IS3 family transposase | - |
| JRC42_RS23850 (JRC42_23850) | 98293..98625 | - | 333 | Protein_108 | tyrosine-type recombinase/integrase | - |
| JRC42_RS23855 (JRC42_23855) | 98732..98863 | - | 132 | Protein_109 | serine/threonine protein kinase | - |
| JRC42_RS23860 (JRC42_23860) | 98936..99257 | + | 322 | Protein_110 | epoxyqueuosine reductase QueH | - |
| JRC42_RS23865 (JRC42_23865) | 99499..99876 | - | 378 | WP_204678055.1 | hypothetical protein | - |
| JRC42_RS23870 (JRC42_23870) | 100031..100249 | + | 219 | Protein_112 | IS200-IS605 family transposase ISEc46 | Transposase |
| JRC42_RS25320 | 100465..100737 | + | 273 | Protein_113 | secretion protein EspO | - |
| JRC42_RS23875 (JRC42_23875) | 101058..101204 | + | 147 | Protein_114 | IS3 family transposase | - |
| JRC42_RS25325 | 101373..102023 | + | 651 | WP_244259620.1 | Protein kinase OspG | VF |
| JRC42_RS23885 (JRC42_23885) | 102854..103150 | - | 297 | Protein_116 | IS256 family transposase IS1414 | Transposase |
| JRC42_RS23890 (JRC42_23890) | 103281..103412 | + | 132 | Protein_117 | IS21 family transposase | - |
| JRC42_RS23895 (JRC42_23895) | 103485..103694 | + | 210 | Protein_118 | transposase | - |
| JRC42_RS23900 (JRC42_23900) | 103693..103830 | - | 138 | Protein_119 | IS3 family transposase ISEc27 | Transposase |
| JRC42_RS23905 (JRC42_23905) | 103868..104704 | - | 837 | Protein_120 | IS630 family transposase | - |
| JRC42_RS23910 (JRC42_23910) | 104817..105041 | + | 225 | Protein_121 | IS3 family transposase IS629 | Transposase |
| JRC42_RS23915 (JRC42_23915) | 105222..106430 | + | 1209 | WP_204620295.1 | secretion protein EspV | - |
| JRC42_RS25330 | 106527..106658 | + | 132 | Protein_123 | tryptophan synthase subunit alpha | - |
| JRC42_RS23925 (JRC42_23925) | 106808..107167 | + | 360 | Protein_124 | IS481 family transposase ISErsp1 | Transposase |
| JRC42_RS23930 (JRC42_23930) | 107239..108446 | + | 1208 | Protein_125 | IS256 family transposase IS1414 | Transposase |
| JRC42_RS25335 | 108832..108999 | - | 168 | WP_244259621.1 | Secreted effector protein EspF(U) | VF |
| JRC42_RS25340 | 108941..109136 | + | 196 | Protein_127 | Secreted effector protein EspF(U) | VF |
| JRC42_RS23940 (JRC42_23940) | 109260..109794 | - | 535 | Protein_128 | IS66 family transposase IS679 | Transposase |
| JRC42_RS23945 (JRC42_23945) | 109814..110161 | - | 348 | WP_204619037.1 | IS66 family transposase ISCro1 | Transposase |
| JRC42_RS23950 (JRC42_23950) | 110158..110577 | - | 420 | WP_204619039.1 | IS66 family transposase ISEc8 | Transposase |
| JRC42_RS25345 | 110537..110752 | - | 216 | WP_244259622.1 | hypothetical protein | - |
| JRC42_RS23955 (JRC42_23955) | 110979..111107 | - | 129 | WP_244259630.1 | DUF5431 family protein | - |
| JRC42_RS23960 (JRC42_23960) | 111259..111441 | - | 183 | WP_000373383.1 | hypothetical protein | - |
| JRC42_RS23965 (JRC42_23965) | 111484..111813 | - | 330 | Protein_134 | hypothetical protein | - |
| JRC42_RS23970 (JRC42_23970) | 111906..112121 | - | 216 | WP_001180117.1 | hypothetical protein | - |
| JRC42_RS23975 (JRC42_23975) | 112111..112356 | - | 246 | WP_061104102.1 | hypothetical protein | - |
| JRC42_RS23980 (JRC42_23980) | 112400..112723 | - | 324 | WP_001181902.1 | hypothetical protein | - |
| JRC42_RS25350 | 112918..113034 | - | 117 | Protein_138 | molecular chaperone DnaJ | - |
| JRC42_RS23985 (JRC42_23985) | 113270..113620 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| JRC42_RS23990 (JRC42_23990) | 113617..113952 | - | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JRC42_RS23995 (JRC42_23995) | 115154..115570 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JRC42_RS24000 (JRC42_24000) | 115563..116543 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| JRC42_RS24005 (JRC42_24005) | 116957..117265 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| JRC42_RS24010 (JRC42_24010) | 117352..117996 | - | 645 | WP_204620298.1 | ParA family protein | - |
| JRC42_RS24015 (JRC42_24015) | 118176..118955 | - | 780 | WP_204678064.1 | site-specific integrase | - |
| JRC42_RS24020 (JRC42_24020) | 118957..119337 | - | 381 | WP_204620299.1 | hypothetical protein | - |
| JRC42_RS24025 (JRC42_24025) | 119863..120474 | + | 612 | WP_244259623.1 | DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|