MGE detailed information
MGE type: Prophage MGE length: 63491 bp
Accession: NZ_CP070232 Location: 2231811..2295301 Organism: Escherichia coli strain 10R Replicon: chromosome
Accession: NZ_CP070232 Location: 2231811..2295301 Organism: Escherichia coli strain 10R Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JTF63_RS10730 () | 2227710..2228930 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| JTF63_RS10735 () | 2229055..2229750 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JTF63_RS10740 () | 2229703..2230995 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JTF63_RS10745 () | 2231154..2231768 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JTF63_RS10750 () | 2231811..2232665 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| JTF63_RS10755 () | 2232667..2233284 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| JTF63_RS10760 () | 2233295..2235718 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| JTF63_RS10765 () | 2235779..2238205 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| JTF63_RS10770 () | 2238404..2238709 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JTF63_RS10775 () | 2238817..2239527 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JTF63_RS10780 () | 2239530..2240090 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JTF63_RS10785 () | 2240125..2240466 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JTF63_RS10790 () | 2240601..2240927 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JTF63_RS10795 () | 2241133..2242327 | + | 1195 | Protein_2107 | starvation-sensing protein RspA | - |
| JTF63_RS10800 () | 2242339..2243358 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JTF63_RS10805 () | 2243416..2243526 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| JTF63_RS10810 () | 2243546..2244826 | - | 1281 | WP_000876958.1 | site-specific integrase | - |
| JTF63_RS10815 () | 2244861..2245112 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JTF63_RS10820 () | 2245185..2247656 | - | 2472 | Protein_2112 | 3'-5' exoribonuclease | - |
| JTF63_RS10825 () | 2247749..2247940 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JTF63_RS10830 () | 2247937..2248125 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JTF63_RS10835 () | 2248693..2248911 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| JTF63_RS10840 () | 2249071..2249226 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JTF63_RS10845 () | 2249393..2249800 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JTF63_RS10850 () | 2249884..2250114 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JTF63_RS10855 () | 2250098..2250619 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| JTF63_RS10860 () | 2250600..2251565 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| JTF63_RS10865 () | 2251606..2252028 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| JTF63_RS10870 () | 2252025..2252381 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| JTF63_RS10875 () | 2252901..2254436 | - | 1536 | WP_001333339.1 | IS66-like element ISEc22 family transposase | - |
| JTF63_RS10880 () | 2254485..2254832 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JTF63_RS10885 () | 2254829..2255233 | - | 405 | WP_000839179.1 | IS66 family insertion sequence hypothetical protein | - |
| JTF63_RS10890 () | 2255455..2255742 | + | 288 | Protein_2126 | hypothetical protein | - |
| JTF63_RS10895 () | 2256511..2257824 | + | 1314 | WP_000589005.1 | ISNCY family transposase | - |
| JTF63_RS10900 () | 2258261..2258593 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JTF63_RS10905 () | 2258796..2259101 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JTF63_RS10910 () | 2259126..2259365 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JTF63_RS10915 () | 2259365..2259652 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JTF63_RS10920 () | 2259724..2259879 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JTF63_RS10925 () | 2260096..2260347 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| JTF63_RS10930 () | 2260414..2260692 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JTF63_RS10935 () | 2260694..2261743 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| JTF63_RS10940 () | 2261757..2262248 | + | 492 | WP_052424683.1 | antitermination protein | - |
| JTF63_RS10945 () | 2262282..2262979 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| JTF63_RS10950 () | 2263317..2263532 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JTF63_RS10955 () | 2263537..2263848 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JTF63_RS10960 () | 2263845..2264378 | + | 534 | WP_001092971.1 | lysozyme | - |
| JTF63_RS10965 () | 2264375..2264872 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JTF63_RS10970 () | 2265235..2265447 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JTF63_RS10975 () | 2265458..2265646 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JTF63_RS10980 () | 2265649..2265714 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JTF63_RS10985 () | 2265794..2265949 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JTF63_RS10990 () | 2266121..2266294 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JTF63_RS10995 () | 2266446..2266856 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JTF63_RS11000 () | 2266914..2267147 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JTF63_RS11005 () | 2267536..2268081 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| JTF63_RS11010 () | 2268056..2269981 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| JTF63_RS11015 () | 2269978..2270184 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JTF63_RS11020 () | 2270181..2271782 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| JTF63_RS11025 () | 2271763..2273082 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| JTF63_RS11030 () | 2273092..2273424 | + | 333 | WP_001295978.1 | head decoration protein | - |
| JTF63_RS11035 () | 2273481..2274506 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| JTF63_RS11040 () | 2274548..2274946 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| JTF63_RS11045 () | 2274958..2275311 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| JTF63_RS11050 () | 2275323..2275901 | + | 579 | WP_000975070.1 | phage tail protein | - |
| JTF63_RS11055 () | 2275898..2276293 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| JTF63_RS11060 () | 2276301..2277041 | + | 741 | WP_001349920.1 | phage tail protein | - |
| JTF63_RS11065 () | 2277057..2277479 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| JTF63_RS11070 () | 2277461..2277895 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| JTF63_RS11075 () | 2277888..2280449 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| JTF63_RS11080 () | 2280446..2280775 | + | 330 | WP_000847379.1 | phage tail protein | - |
| JTF63_RS11085 () | 2280775..2281473 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| JTF63_RS11090 () | 2281479..2282222 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| JTF63_RS11095 () | 2282159..2282791 | + | 633 | WP_000090895.1 | tail assembly protein | - |
| JTF63_RS11100 () | 2282852..2286349 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| JTF63_RS11105 () | 2286419..2287018 | + | 600 | WP_001230375.1 | Ail/Lom family protein | - |
| JTF63_RS11110 () | 2287083..2288750 | + | 1668 | Protein_2170 | prophage tail fiber N-terminal domain-containing protein | - |
| JTF63_RS11120 () | 2290516..2291418 | + | 903 | WP_044721746.1 | phage tail protein | - |
| JTF63_RS11125 () | 2291418..2291993 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JTF63_RS11130 () | 2292091..2292681 | - | 591 | WP_204689282.1 | recombinase family protein | - |
| JTF63_RS11135 () | 2292998..2293231 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JTF63_RS11140 () | 2293300..2293413 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JTF63_RS11145 () | 2293934..2295301 | + | 1368 | Protein_2177 | MHS family MFS transporter | - |
| JTF63_RS11150 () | 2295390..2296850 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JTF63_RS11155 () | 2296885..2297088 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JTF63_RS11160 () | 2297265..2297951 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JTF63_RS11165 () | 2298040..2298786 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|