MGE detailed information
MGE type: Genomic_island MGE length: 20775 bp
Accession: NZ_CP070162 Location: 727340..748114 Organism: Escherichia coli strain FDAARGOS_1283 Replicon: chromosome
Accession: NZ_CP070162 Location: 727340..748114 Organism: Escherichia coli strain FDAARGOS_1283 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K13_RS03370 (723459) | 723459..723884 | - | 426 | WP_000946069.1 | type VI secretion system baseplate subunit TssE | - |
| I6K13_RS03375 (723889) | 723889..725373 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K13_RS03380 (725396) | 725396..725899 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K13_RS03385 (726601) | 726601..727119 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K13_RS03390 (727340) | 727340..729322 | + | 1983 | WP_021537848.1 | Actin cross-linking toxin VgrG1 | VF |
| I6K13_RS03395 (729429) | 729429..730475 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K13_RS03400 (730468) | 730468..731430 | + | 963 | WP_021523751.1 | DUF4150 domain-containing protein | - |
| I6K13_RS25530 (731572) | 731572..731907 | + | 336 | WP_251121534.1 | cysteine peptidase family C39 domain-containing protein | - |
| I6K13_RS03405 (731882) | 731882..732172 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K13_RS03410 (732430) | 732430..733194 | + | 765 | Protein_676 | ISAs1 family transposase ISEc1 | Transposase |
| I6K13_RS03415 (733423) | 733423..733926 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K13_RS03420 (734020) | 734020..734508 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K13_RS03425 (734534) | 734534..734728 | + | 195 | Protein_679 | ISAs1 family transposase | - |
| I6K13_RS03430 (734780) | 734780..735550 | - | 771 | WP_021523754.1 | 2-oxoglutaramate amidase | - |
| I6K13_RS03435 (735731) | 735731..736177 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K13_RS03440 (736220) | 736220..738664 | - | 2445 | WP_021523755.1 | Acyl-coenzyme A dehydrogenase | VF |
| I6K13_RS03445 (738904) | 738904..739482 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| I6K13_RS03450 (739687) | 739687..740454 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| I6K13_RS03455 (740425) | 740425..741165 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K13_RS03460 (741477) | 741477..742226 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| I6K13_RS03465 (742402) | 742402..742899 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K13_RS03470 (742894) | 742894..743238 | - | 345 | WP_125093574.1 | hypothetical protein | - |
| I6K13_RS03475 (743317) | 743317..745023 | - | 1707 | Protein_689 | Flagellar biosynthesis protein FlhA | VF |
| I6K13_RS03480 (744995) | 744995..745780 | + | 786 | WP_061301231.1 | Chemotaxis protein LafU | VF |
| I6K13_RS03485 (745851) | 745851..746906 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K13_RS03490 (746958) | 746958..747251 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K13_RS03495 (747254) | 747254..747652 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K13_RS03500 (747662) | 747662..748114 | + | 453 | WP_071778924.1 | GNAT family N-acetyltransferase | - |
| I6K13_RS03505 (748304) | 748304..749443 | + | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| I6K13_RS03510 (749440) | 749440..750054 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K13_RS03515 (750111) | 750111..751568 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K13_RS03520 (751829) | 751829..752287 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - (752883) | 752883..752963 | + | 81 | NuclAT_4 | - | - |
| - (752883) | 752883..752963 | + | 81 | NuclAT_4 | - | - |
| - (752883) | 752883..752963 | + | 81 | NuclAT_4 | - | - |
| - (752883) | 752883..752963 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|