MGE detailed information
MGE type: Prophage MGE length: 50674 bp
Accession: NZ_CP070152 Location: 4926956..4977629 Organism: Escherichia coli strain FDAARGOS_1285 Replicon: chromosome
Accession: NZ_CP070152 Location: 4926956..4977629 Organism: Escherichia coli strain FDAARGOS_1285 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K15_RS24720 (4922945) | 4922945..4922992 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I6K15_RS23915 (4923006) | 4923006..4923989 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I6K15_RS25075 (4924264) | 4924264..4924437 | + | 174 | WP_001296046.1 | protein YnaL | - |
| I6K15_RS23920 (4924467) | 4924467..4925840 | + | 1374 | WP_022645642.1 | ATP-dependent RNA helicase DbpA | - |
| I6K15_RS23925 (4925969) | 4925969..4926904 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I6K15_RS23930 (4926956) | 4926956..4928191 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6K15_RS23935 (4928193) | 4928193..4928408 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (4928512) | 4928512..4928690 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4928512) | 4928512..4928690 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4928512) | 4928512..4928690 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (4928512) | 4928512..4928690 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I6K15_RS23940 (4928487) | 4928487..4928696 | - | 210 | WP_063814942.1 | double-strand break reduction protein RcbA | - |
| I6K15_RS23945 (4928689) | 4928689..4928883 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I6K15_RS23950 (4928940) | 4928940..4929749 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| I6K15_RS23955 (4929742) | 4929742..4932342 | - | 2601 | WP_000105124.1 | exodeoxyribonuclease VIII | - |
| I6K15_RS23960 (4932444) | 4932444..4932719 | - | 276 | WP_000632297.1 | protein RacC | - |
| I6K15_RS23965 (4932794) | 4932794..4932964 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| I6K15_RS23970 (4932964) | 4932964..4933185 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| I6K15_RS23975 (4933627) | 4933627..4934115 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| I6K15_RS23980 (4934112) | 4934112..4934267 | - | 156 | WP_053289980.1 | DUF1391 family protein | - |
| I6K15_RS23985 (4934587) | 4934587..4935063 | - | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| I6K15_RS23990 (4935187) | 4935187..4935483 | + | 297 | WP_000712069.1 | toxin YdaS | - |
| I6K15_RS23995 (4935506) | 4935506..4935927 | + | 422 | Protein_4597 | toxin YdaT family protein | - |
| I6K15_RS24000 (4935940) | 4935940..4936799 | + | 860 | Protein_4598 | DUF1376 domain-containing protein | - |
| I6K15_RS24005 (4936806) | 4936806..4937552 | + | 747 | WP_000788970.1 | ATP-binding protein | - |
| I6K15_RS24010 (4937575) | 4937575..4938336 | + | 762 | WP_000450662.1 | DUF1627 domain-containing protein | - |
| I6K15_RS24015 (4938352) | 4938352..4938774 | + | 423 | WP_001151150.1 | DUF977 family protein | - |
| I6K15_RS24020 (4938832) | 4938832..4939188 | + | 357 | WP_000403785.1 | hypothetical protein | - |
| I6K15_RS24025 (4939282) | 4939282..4939464 | + | 183 | WP_001224662.1 | hypothetical protein | - |
| I6K15_RS24030 (4939457) | 4939457..4939633 | + | 177 | WP_000753060.1 | hypothetical protein | - |
| I6K15_RS24035 (4939630) | 4939630..4939996 | + | 367 | Protein_4605 | hypothetical protein | - |
| I6K15_RS24040 (4940555) | 4940555..4940710 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6K15_RS24045 (4940878) | 4940878..4941150 | + | 273 | WP_023141427.1 | hypothetical protein | - |
| I6K15_RS24050 (4941152) | 4941152..4942201 | + | 1050 | WP_053289977.1 | DUF968 domain-containing protein | - |
| I6K15_RS24055 (4942214) | 4942214..4942588 | + | 375 | WP_053289978.1 | RusA family crossover junction endodeoxyribonuclease | - |
| I6K15_RS24060 (4942585) | 4942585..4943406 | + | 822 | WP_032342160.1 | antitermination protein | - |
| I6K15_RS24065 (4943687) | 4943687..4944727 | + | 1041 | WP_021562591.1 | hypothetical protein | - |
| I6K15_RS24070 (4944728) | 4944728..4945237 | + | 510 | WP_024233158.1 | hypothetical protein | - |
| I6K15_RS24075 (4945374) | 4945374..4945517 | - | 144 | WP_162721299.1 | hypothetical protein | - |
| I6K15_RS24080 (4945550) | 4945550..4945765 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| I6K15_RS24085 (4945770) | 4945770..4946114 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| I6K15_RS24090 (4946080) | 4946080..4946352 | - | 273 | WP_000370551.1 | hypothetical protein | - |
| I6K15_RS24095 (4946458) | 4946458..4946991 | + | 534 | WP_000992105.1 | lysozyme | - |
| I6K15_RS24100 (4947208) | 4947208..4947393 | + | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| I6K15_RS24105 (4947590) | 4947590..4949047 | + | 1458 | WP_204628467.1 | TrkH family potassium uptake protein | - |
| I6K15_RS24990 (4949185) | 4949185..4949442 | + | 258 | Protein_4620 | ParB/Srx family N-terminal domain-containing protein | - |
| I6K15_RS24115 (4949969) | 4949969..4950901 | + | 933 | WP_204628370.1 | hypothetical protein | - |
| I6K15_RS24120 (4950879) | 4950879..4951088 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| I6K15_RS24125 (4951092) | 4951092..4952185 | + | 1094 | Protein_4623 | terminase small subunit | - |
| I6K15_RS24130 (4952166) | 4952166..4953467 | + | 1302 | WP_063814925.1 | terminase family protein | - |
| I6K15_RS24135 (4953470) | 4953470..4954877 | + | 1408 | Protein_4625 | DUF4055 domain-containing protein | - |
| I6K15_RS24140 (4954861) | 4954861..4955973 | + | 1113 | WP_001351715.1 | phage minor head protein | - |
| I6K15_RS24145 (4956078) | 4956078..4956842 | + | 765 | WP_063814926.1 | hypothetical protein | - |
| I6K15_RS24150 (4956941) | 4956941..4958080 | + | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| I6K15_RS24155 (4958123) | 4958123..4958299 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| I6K15_RS24160 (4958303) | 4958303..4958698 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| I6K15_RS24165 (4958698) | 4958698..4959081 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| I6K15_RS24170 (4959082) | 4959082..4959462 | + | 381 | WP_063814927.1 | hypothetical protein | - |
| I6K15_RS24175 (4959459) | 4959459..4959851 | + | 393 | WP_000144678.1 | phage tail terminator-like protein | - |
| I6K15_RS24180 (4959878) | 4959878..4960840 | + | 963 | WP_000094292.1 | phage tail tube protein | - |
| I6K15_RS24185 (4960991) | 4960991..4961350 | + | 360 | WP_012565075.1 | protein YdaY | - |
| I6K15_RS24190 (4961824) | 4961824..4965057 | + | 3234 | WP_000840618.1 | phage tail tape measure protein | - |
| I6K15_RS24195 (4965050) | 4965050..4965388 | + | 339 | WP_000024051.1 | phage tail protein | - |
| I6K15_RS24200 (4965388) | 4965388..4966086 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| I6K15_RS24205 (4966092) | 4966092..4966835 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| I6K15_RS24210 (4966772) | 4966772..4967374 | + | 603 | WP_000090943.1 | tail assembly protein | - |
| I6K15_RS24215 (4967435) | 4967435..4970914 | + | 3480 | WP_000515675.1 | host specificity protein J | - |
| I6K15_RS24220 (4970982) | 4970982..4971581 | + | 600 | WP_001233093.1 | Outer membrane protein X | VF |
| I6K15_RS24225 (4971646) | 4971646..4974923 | + | 3278 | Protein_4643 | prophage tail fiber N-terminal domain-containing protein | - |
| I6K15_RS24230 (4974923) | 4974923..4975498 | + | 576 | WP_001351719.1 | tail fiber assembly protein | - |
| I6K15_RS24235 (4975596) | 4975596..4976185 | - | 590 | Protein_4645 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6K15_RS24240 (4976502) | 4976502..4976735 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6K15_RS24245 (4976804) | 4976804..4976917 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| I6K15_RS24255 (4978034) | 4978034..4978207 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| I6K15_RS24260 (4978472) | 4978472..4978906 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| I6K15_RS24265 (4979047) | 4979047..4980180 | - | 1134 | WP_000837933.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|