MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_CP070148 Location: 856496..877177 Organism: Escherichia coli strain FDAARGOS_1297 Replicon: chromosome
Accession: NZ_CP070148 Location: 856496..877177 Organism: Escherichia coli strain FDAARGOS_1297 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K27_RS04010 (852611) | 852611..853036 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| I6K27_RS04015 (853041) | 853041..854525 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K27_RS04020 (854548) | 854548..855051 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K27_RS04025 (855757) | 855757..856275 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K27_RS04030 (856496) | 856496..858478 | + | 1983 | WP_000053636.1 | hypothetical protein | VF |
| I6K27_RS04035 (858585) | 858585..859631 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K27_RS04040 (859624) | 859624..861063 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K27_RS04045 (861038) | 861038..861328 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K27_RS04050 (861586) | 861586..862350 | + | 765 | Protein_800 | ISAs1 family transposase ISEc1 | Transposase |
| I6K27_RS04055 (862579) | 862579..863082 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K27_RS04060 (863176) | 863176..863664 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K27_RS04065 (863690) | 863690..863884 | + | 195 | Protein_803 | ISAs1 family transposase | - |
| I6K27_RS04070 (863935) | 863935..864705 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K27_RS04075 (864886) | 864886..865332 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K27_RS04080 (865375) | 865375..867819 | - | 2445 | WP_000973137.1 | hypothetical protein | VF |
| I6K27_RS04085 (868059) | 868059..868637 | + | 579 | WP_000284050.1 | Tyrosine--tRNA ligase | VF |
| I6K27_RS04090 (868842) | 868842..869609 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K27_RS04095 (869580) | 869580..870320 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K27_RS04100 (870632) | 870632..871381 | + | 750 | WP_000093936.1 | HTH-type transcriptional regulator MhqR | VF |
| I6K27_RS04105 (871557) | 871557..872054 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K27_RS04110 (872137) | 872137..872295 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K27_RS04115 (872374) | 872374..874086 | - | 1713 | Protein_813 | Cbb3-type cytochrome c oxidase subunit CcoN1 | VF |
| I6K27_RS04120 (874058) | 874058..874843 | + | 786 | WP_000207544.1 | HTH-type transcriptional regulator NorG | VF |
| I6K27_RS04125 (874914) | 874914..875969 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K27_RS04130 (876021) | 876021..876314 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K27_RS04135 (876317) | 876317..876715 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K27_RS04140 (876725) | 876725..877177 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K27_RS04145 (877367) | 877367..878506 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K27_RS04150 (878503) | 878503..879117 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K27_RS04155 (879174) | 879174..880631 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K27_RS04160 (880892) | 880892..881350 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - (881946) | 881946..882026 | + | 81 | NuclAT_4 | - | - |
| - (881946) | 881946..882026 | + | 81 | NuclAT_4 | - | - |
| - (881946) | 881946..882026 | + | 81 | NuclAT_4 | - | - |
| - (881946) | 881946..882026 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|