MGE detailed information
MGE type: Conjugative plasmid MGE length: 69978 bp
Accession: NZ_CP070118 Location: 1..69978 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: plasmid unnamed3
Accession: NZ_CP070118 Location: 1..69978 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K28_RS25675 (228) | 228..545 | - | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| I6K28_RS25680 (532) | 532..1098 | - | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| I6K28_RS25685 (1088) | 1088..2539 | - | 1452 | WP_016235429.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| I6K28_RS25690 (2539) | 2539..3267 | - | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| I6K28_RS25695 (3254) | 3254..3820 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| I6K28_RS25700 (3842) | 3842..4153 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| I6K28_RS25705 (4168) | 4168..4530 | - | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| I6K28_RS25710 (4564) | 4564..4791 | - | 228 | WP_000589556.1 | conjugal transfer relaxosome protein TraY | - |
| I6K28_RS25715 (4911) | 4911..5558 | - | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| I6K28_RS25720 (5750) | 5750..6133 | - | 384 | WP_001151529.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| I6K28_RS25725 (6409) | 6409..7056 | + | 648 | WP_072144024.1 | hypothetical protein | VF |
| I6K28_RS25730 (7353) | 7353..8174 | - | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| I6K28_RS25735 (8285) | 8285..8581 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| I6K28_RS25740 (8881) | 8881..9177 | + | 297 | Protein_14 | hypothetical protein | - |
| I6K28_RS25745 (9478) | 9478..9600 | - | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| I6K28_RS26620 (9545) | 9545..9697 | - | 153 | Protein_16 | DUF5431 family protein | - |
| - (9705) | 9705..9890 | + | 186 | NuclAT_0 | - | - |
| - (9705) | 9705..9890 | - | 186 | NuclAT_0 | - | - |
| - (9705) | 9705..9890 | - | 186 | NuclAT_0 | - | - |
| - (9705) | 9705..9890 | - | 186 | NuclAT_0 | - | - |
| - (9705) | 9705..9890 | - | 186 | NuclAT_0 | - | - |
| I6K28_RS25750 (9847) | 9847..10161 | - | 315 | WP_001562885.1 | hypothetical protein | - |
| I6K28_RS25755 (10158) | 10158..10877 | - | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| I6K28_RS25760 (10874) | 10874..11308 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| I6K28_RS25765 (11377) | 11377..13341 | - | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K28_RS25770 (13402) | 13402..13635 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| I6K28_RS25775 (13693) | 13693..14220 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| I6K28_RS25780 (14522) | 14522..14959 | + | 438 | Protein_23 | hypothetical protein | - |
| I6K28_RS26625 (15045) | 15045..15607 | - | 563 | Protein_24 | class I SAM-dependent methyltransferase | - |
| I6K28_RS25790 (15654) | 15654..17015 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| I6K28_RS25795 (17067) | 17067..17297 | - | 231 | WP_001537563.1 | hypothetical protein | - |
| I6K28_RS25800 (17815) | 17815..18283 | + | 469 | Protein_27 | hypothetical protein | - |
| I6K28_RS25805 (18262) | 18262..18453 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| I6K28_RS25810 (18453) | 18453..18872 | - | 420 | WP_000271737.1 | DUF1380 family protein | - |
| I6K28_RS25815 (18919) | 18919..19344 | - | 426 | WP_001198895.1 | antirestriction protein | - |
| I6K28_RS25820 (19761) | 19761..20531 | - | 771 | WP_204628280.1 | hypothetical protein | - |
| I6K28_RS25825 (20576) | 20576..21094 | - | 519 | WP_251301793.1 | DUF1380 family protein | - |
| I6K28_RS25830 (21024) | 21024..21245 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| I6K28_RS25835 (21246) | 21246..21929 | - | 684 | WP_016235423.1 | DNA methylase | - |
| I6K28_RS25840 (22005) | 22005..22316 | - | 312 | WP_032142385.1 | hypothetical protein | - |
| I6K28_RS25845 (22313) | 22313..23215 | - | 903 | WP_077631593.1 | DUF1281 domain-containing protein | - |
| I6K28_RS26630 (23310) | 23310..23600 | - | 291 | WP_072262190.1 | hypothetical protein | - |
| I6K28_RS25855 (23624) | 23624..24046 | - | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| I6K28_RS25860 (24049) | 24049..25029 | - | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| I6K28_RS25865 (25231) | 25231..25350 | + | 120 | Protein_40 | transposase domain-containing protein | - |
| I6K28_RS25870 (25418) | 25418..25984 | - | 567 | WP_000587874.1 | hypothetical protein | - |
| I6K28_RS25875 (26632) | 26632..27189 | + | 558 | WP_000103553.1 | hypothetical protein | VF |
| I6K28_RS25880 (27498) | 27498..27788 | + | 291 | WP_000754127.1 | DUF2282 domain-containing protein | - |
| I6K28_RS25885 (27820) | 27820..28746 | + | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| I6K28_RS25890 (28715) | 28715..29473 | + | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| I6K28_RS25895 (29475) | 29475..30002 | + | 528 | WP_001196880.1 | DoxX family protein | - |
| I6K28_RS25900 (30335) | 30335..30697 | - | 363 | WP_000181069.1 | hypothetical protein | - |
| I6K28_RS25905 (30694) | 30694..30885 | - | 192 | WP_000175572.1 | DUF2164 family protein | - |
| I6K28_RS25910 (31082) | 31082..31183 | - | 102 | Protein_49 | methionyl-tRNA formyltransferase | - |
| I6K28_RS25915 (31198) | 31198..31707 | - | 510 | WP_000115001.1 | peptide deformylase | - |
| I6K28_RS25920 (32235) | 32235..32600 | + | 366 | WP_016235422.1 | hypothetical protein | - |
| I6K28_RS25925 (32600) | 32600..33787 | + | 1188 | Protein_52 | IS91 family transposase IS91 | Transposase |
| I6K28_RS25930 (34147) | 34147..34629 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| I6K28_RS25935 (34746) | 34746..35594 | - | 849 | WP_016235419.1 | 3'-5' exonuclease | - |
| I6K28_RS25940 (35640) | 35640..35918 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| I6K28_RS25945 (35918) | 35918..36187 | - | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| I6K28_RS25950 (37101) | 37101..37958 | - | 858 | WP_042018306.1 | incFII family plasmid replication initiator RepA | - |
| I6K28_RS25955 (37951) | 37951..38025 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| I6K28_RS25960 (38249) | 38249..38509 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| I6K28_RS25965 (38749) | 38749..39339 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| I6K28_RS25970 (39377) | 39377..39586 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| I6K28_RS25975 (39632) | 39632..40093 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| I6K28_RS25980 (40339) | 40339..40551 | - | 213 | WP_151854166.1 | ANR family transcriptional regulator | - |
| I6K28_RS25985 (40680) | 40680..41240 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| I6K28_RS25990 (41343) | 41343..42203 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| I6K28_RS25995 (42262) | 42262..43008 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| I6K28_RS26000 (43028) | 43028..48298 | - | 5271 | WP_097760904.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6K28_RS26005 (48298) | 48298..50523 | - | 2226 | WP_071667847.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6K28_RS26010 (50574) | 50574..51311 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| I6K28_RS26015 (51514) | 51514..52245 | - | 732 | WP_042018826.1 | conjugal transfer complement resistance protein TraT | - |
| I6K28_RS26020 (52259) | 52259..52768 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| I6K28_RS26025 (52765) | 52765..55611 | - | 2847 | WP_050009856.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| I6K28_RS26030 (55608) | 55608..56981 | - | 1374 | WP_001535740.1 | conjugal transfer pilus assembly protein TraH | - |
| I6K28_RS26035 (56968) | 56968..57360 | - | 393 | WP_032144618.1 | F-type conjugal transfer protein TrbF | - |
| I6K28_RS26040 (57314) | 57314..57628 | - | 315 | WP_001620812.1 | P-type conjugative transfer protein TrbJ | - |
| I6K28_RS26045 (57618) | 57618..58163 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6K28_RS26050 (58150) | 58150..58434 | - | 285 | WP_042017850.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6K28_RS26055 (58515) | 58515..58850 | + | 336 | WP_001620807.1 | hypothetical protein | - |
| I6K28_RS26060 (58831) | 58831..59172 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| I6K28_RS26065 (59186) | 59186..59929 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6K28_RS26070 (59922) | 59922..60179 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| I6K28_RS26075 (60206) | 60206..62056 | - | 1851 | WP_032195763.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6K28_RS26080 (62053) | 62053..62691 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6K28_RS26085 (62700) | 62700..63005 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| I6K28_RS26090 (63035) | 63035..64027 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| I6K28_RS26095 (64024) | 64024..64656 | - | 633 | WP_001203738.1 | type-F conjugative transfer system protein TraW | - |
| I6K28_RS26100 (64653) | 64653..65039 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| I6K28_RS26105 (65036) | 65036..67666 | - | 2631 | WP_001535744.1 | type IV secretion system protein TraC | - |
| I6K28_RS26110 (67792) | 67792..68139 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| I6K28_RS26115 (68167) | 68167..68385 | - | 219 | WP_001377841.1 | hypothetical protein | - |
| I6K28_RS26120 (68463) | 68463..68936 | - | 474 | WP_001620797.1 | hypothetical protein | - |
| I6K28_RS26125 (68929) | 68929..69342 | - | 414 | WP_000549581.1 | hypothetical protein | - |
| I6K28_RS26130 (69335) | 69335..69556 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|