MGE detailed information
MGE type: Conjugative plasmid MGE length: 150643 bp
Accession: NZ_CP070116 Location: 1..150643 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: plasmid unnamed1
Accession: NZ_CP070116 Location: 1..150643 Organism: Escherichia coli strain FDAARGOS_1298 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K28_RS24725 (535) | 535..714 | + | 180 | Protein_1 | integrase core domain-containing protein | - |
| I6K28_RS24730 (1518) | 1518..1907 | - | 390 | WP_050019148.1 | IS110 family transposase ISEc20 | Transposase |
| I6K28_RS24735 (2011) | 2011..2964 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| I6K28_RS24740 (3397) | 3397..4506 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| I6K28_RS24745 (4575) | 4575..5477 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| I6K28_RS24750 (5851) | 5851..6039 | + | 189 | WP_001332052.1 | hypothetical protein | - |
| I6K28_RS24755 (6160) | 6160..6900 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| I6K28_RS24760 (7185) | 7185..8162 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| I6K28_RS24765 (8908) | 8908..9231 | + | 324 | Protein_9 | IS21 family transposase IS21 | Transposase |
| I6K28_RS24770 (9233) | 9233..9337 | + | 105 | Protein_10 | AAA family ATPase | - |
| I6K28_RS24775 (9398) | 9398..9911 | + | 514 | Protein_11 | DUF4113 domain-containing protein | - |
| I6K28_RS24785 (11144) | 11144..12058 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| I6K28_RS24790 (12058) | 12058..12885 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| I6K28_RS24795 (12882) | 12882..13739 | + | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| I6K28_RS24800 (13736) | 13736..14593 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| I6K28_RS24805 (14827) | 14827..15084 | - | 258 | Protein_17 | Tn3 family transposase | - |
| I6K28_RS24810 (15082) | 15082..15495 | + | 414 | Protein_18 | phosphopyruvate hydratase | - |
| I6K28_RS24815 (15836) | 15836..16216 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| I6K28_RS24820 (16596) | 16596..17789 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| I6K28_RS24825 (17925) | 17925..19649 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| I6K28_RS24830 (19650) | 19650..20597 | + | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| I6K28_RS24835 (20597) | 20597..22339 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| I6K28_RS24840 (22336) | 22336..23669 | + | 1334 | Protein_24 | L-lysine N6-monooxygenase | VF |
| I6K28_RS24845 (23695) | 23695..25896 | + | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| I6K28_RS24850 (26421) | 26421..27118 | + | 698 | WP_223230114.1 | IS1 family transposase IS1G | Transposase |
| I6K28_RS24855 (27112) | 27112..27537 | - | 426 | WP_025492103.1 | hypothetical protein | - |
| I6K28_RS24860 (27977) | 27977..28456 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| I6K28_RS24865 (28598) | 28598..29023 | + | 426 | WP_223939846.1 | hypothetical protein | - |
| I6K28_RS24870 (29658) | 29658..31160 | + | 1503 | WP_000715081.1 | hypothetical protein | - |
| I6K28_RS24875 (31410) | 31410..31577 | + | 168 | WP_000638861.1 | hypothetical protein | - |
| I6K28_RS26710 (31946) | 31946..32041 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| I6K28_RS26715 (32864) | 32864..32959 | + | 96 | WP_000609144.1 | DinQ-like type I toxin DqlB | - |
| I6K28_RS24880 (33185) | 33185..33882 | + | 698 | WP_223230354.1 | IS1 family transposase IS1S | Transposase |
| I6K28_RS24885 (34182) | 34182..35348 | + | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| I6K28_RS24890 (35348) | 35348..36319 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| I6K28_RS26570 (36956) | 36956..37125 | + | 170 | Protein_37 | hypothetical protein | - |
| I6K28_RS24895 (37122) | 37122..37469 | + | 348 | WP_001350917.1 | hypothetical protein | - |
| I6K28_RS24900 (37538) | 37538..38113 | + | 576 | WP_000343071.1 | hypothetical protein | - |
| I6K28_RS24905 (38126) | 38126..38338 | + | 213 | WP_000092896.1 | hypothetical protein | - |
| I6K28_RS24910 (38599) | 38599..39570 | - | 972 | WP_000082155.1 | IS110 family transposase ISEc32 | Transposase |
| I6K28_RS24915 (39972) | 39972..40397 | + | 426 | WP_001198922.1 | antirestriction protein | - |
| I6K28_RS24920 (40397) | 40397..40858 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| I6K28_RS24925 (40858) | 40858..41040 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| I6K28_RS26575 (41264) | 41264..41517 | - | 254 | Protein_45 | hypothetical protein | - |
| I6K28_RS24935 (42034) | 42034..42264 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| I6K28_RS24940 (42316) | 42316..43677 | + | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| I6K28_RS24945 (43725) | 43725..44288 | + | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| I6K28_RS24950 (44374) | 44374..44793 | - | 420 | WP_015056142.1 | hypothetical protein | - |
| I6K28_RS24955 (45094) | 45094..45591 | + | 498 | Protein_50 | single-stranded DNA-binding protein | - |
| I6K28_RS24960 (45689) | 45689..45922 | + | 234 | WP_000005988.1 | DUF905 family protein | - |
| I6K28_RS24965 (45986) | 45986..47944 | + | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K28_RS24970 (47999) | 47999..48433 | + | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| I6K28_RS24975 (48430) | 48430..49216 | + | 787 | Protein_54 | plasmid SOS inhibition protein A | - |
| - (49161) | 49161..49372 | + | 212 | NuclAT_0 | - | - |
| - (49161) | 49161..49372 | + | 212 | NuclAT_0 | - | - |
| - (49161) | 49161..49372 | + | 212 | NuclAT_0 | - | - |
| - (49161) | 49161..49372 | + | 212 | NuclAT_0 | - | - |
| - (49161) | 49161..49372 | - | 212 | NuclAT_0 | - | - |
| I6K28_RS26580 (49406) | 49406..49519 | + | 114 | Protein_55 | DUF5431 family protein | - |
| I6K28_RS24980 (49464) | 49464..49586 | + | 123 | WP_223195199.1 | Hok/Gef family protein | - |
| I6K28_RS24985 (49887) | 49887..50184 | - | 298 | Protein_57 | hypothetical protein | - |
| I6K28_RS24990 (50485) | 50485..50772 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| I6K28_RS24995 (50891) | 50891..51712 | + | 822 | WP_050019138.1 | DUF932 domain-containing protein | - |
| I6K28_RS25000 (52008) | 52008..52517 | - | 510 | WP_000759163.1 | hypothetical protein | VF |
| I6K28_RS25005 (52932) | 52932..53315 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| I6K28_RS25010 (53502) | 53502..54191 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| I6K28_RS25015 (54284) | 54284..54685 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| I6K28_RS25020 (54718) | 54718..55083 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| I6K28_RS25025 (55098) | 55098..55409 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| I6K28_RS25030 (55431) | 55431..55997 | + | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| I6K28_RS25035 (55984) | 55984..56712 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| I6K28_RS25040 (56712) | 56712..58139 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| I6K28_RS25045 (58129) | 58129..58719 | + | 591 | WP_000002796.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| I6K28_RS25050 (58706) | 58706..58903 | + | 198 | WP_001324648.1 | conjugal transfer protein TrbD | - |
| I6K28_RS25055 (58915) | 58915..59166 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| I6K28_RS25060 (59163) | 59163..59678 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| I6K28_RS25065 (59813) | 59813..60034 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| I6K28_RS25070 (60194) | 60194..62821 | + | 2628 | WP_001064251.1 | type IV secretion system protein TraC | - |
| I6K28_RS25075 (62818) | 62818..63204 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| I6K28_RS25080 (63201) | 63201..63833 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| I6K28_RS25085 (63830) | 63830..64822 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| I6K28_RS25090 (64831) | 64831..65469 | + | 639 | WP_022630459.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| I6K28_RS25095 (65466) | 65466..67274 | + | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| I6K28_RS25100 (67301) | 67301..67558 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| I6K28_RS25105 (67551) | 67551..68294 | + | 744 | WP_001030389.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| I6K28_RS25110 (68310) | 68310..68657 | + | 348 | WP_001287676.1 | conjugal transfer protein TrbA | - |
| I6K28_RS25115 (68776) | 68776..69060 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| I6K28_RS25120 (69047) | 69047..69592 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| I6K28_RS25125 (69522) | 69522..69884 | + | 363 | WP_071779407.1 | P-type conjugative transfer protein TrbJ | - |
| I6K28_RS25130 (69884) | 69884..71257 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| I6K28_RS25135 (71254) | 71254..74076 | + | 2823 | WP_001007012.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| I6K28_RS25140 (74091) | 74091..74594 | + | 504 | WP_000605510.1 | hypothetical protein | - |
| I6K28_RS25145 (74626) | 74626..75357 | + | 732 | WP_001447147.1 | conjugal transfer complement resistance protein TraT | - |
| I6K28_RS25150 (75609) | 75609..77807 | + | 2199 | WP_001496532.1 | type IV conjugative transfer system coupling protein TraD | - |
| I6K28_RS25155 (77807) | 77807..83077 | + | 5271 | WP_000986988.1 | Multifunctional conjugation protein TraI | Relaxase |
| I6K28_RS25160 (83097) | 83097..83843 | + | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| I6K28_RS25165 (83898) | 83898..84458 | + | 561 | WP_000139342.1 | fertility inhibition protein FinO | - |
| I6K28_RS25170 (84590) | 84590..84802 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| I6K28_RS25175 (85048) | 85048..85509 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| I6K28_RS25180 (85555) | 85555..85764 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| I6K28_RS25185 (85802) | 85802..86392 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| I6K28_RS25190 (86454) | 86454..89216 | - | 2763 | Protein_98 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| I6K28_RS25195 (89334) | 89334..90542 | + | 1209 | WP_204628278.1 | IS4 family transposase IS10R | Transposase |
| I6K28_RS25200 (90558) | 90558..90677 | - | 120 | Protein_100 | LysR family transcriptional regulator | - |
| I6K28_RS25205 (90908) | 90908..92113 | - | 1206 | WP_000599530.1 | sodium/glutamate symporter | - |
| I6K28_RS25210 (92557) | 92557..92877 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| I6K28_RS25215 (92870) | 92870..93256 | + | 387 | WP_050019060.1 | hypothetical protein | - |
| I6K28_RS25220 (93264) | 93264..93950 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| I6K28_RS25225 (93928) | 93928..94551 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| I6K28_RS25230 (94633) | 94633..95838 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| I6K28_RS25235 (95951) | 95951..96544 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| I6K28_RS25240 (96632) | 96632..97048 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| I6K28_RS25245 (97058) | 97058..98266 | - | 1209 | Protein_109 | IS4 family transposase IS10R | Transposase |
| I6K28_RS25250 (98621) | 98621..99235 | + | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| I6K28_RS25255 (99300) | 99300..100429 | + | 1130 | WP_085959879.1 | IS3 family transposase IS1133 | Transposase |
| I6K28_RS25260 (100536) | 100536..101339 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| I6K28_RS25265 (101339) | 101339..102175 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| I6K28_RS25270 (102497) | 102497..102751 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| I6K28_RS26585 (102790) | 102790..103026 | - | 237 | WP_223228793.1 | replication protein RepA | - |
| I6K28_RS26590 (103017) | 103017..103064 | + | 48 | WP_077822033.1 | hypothetical protein | - |
| I6K28_RS25280 (103057) | 103057..103914 | + | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| I6K28_RS25285 (104830) | 104830..105099 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| I6K28_RS25290 (105099) | 105099..105377 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| I6K28_RS25295 (105423) | 105423..106271 | + | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| I6K28_RS25300 (106457) | 106457..108337 | + | 1881 | WP_001283335.1 | colicin Ia central receptor-binding domain-containing protein | - |
| I6K28_RS25305 (108359) | 108359..108694 | - | 336 | WP_001080729.1 | colicin 1A immunity protein | - |
| I6K28_RS25310 (108941) | 108941..109345 | + | 405 | WP_000839181.1 | IS66 family transposase ISEc22 | Transposase |
| I6K28_RS25315 (109342) | 109342..109689 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| I6K28_RS25320 (109738) | 109738..111276 | + | 1539 | WP_000099202.1 | IS66 family transposase ISEc22 | Transposase |
| I6K28_RS25325 (111324) | 111324..111500 | + | 177 | Protein_126 | DUF6404 family protein | - |
| I6K28_RS25330 (111562) | 111562..112152 | - | 591 | WP_001350923.1 | hypothetical protein | - |
| I6K28_RS25335 (112149) | 112149..112409 | - | 261 | WP_000343091.1 | hypothetical protein | - |
| I6K28_RS25340 (112702) | 112702..113154 | + | 453 | WP_000670963.1 | acyltransferase | - |
| I6K28_RS25345 (113210) | 113210..113476 | - | 267 | WP_001017350.1 | FAD-dependent oxidoreductase | - |
| I6K28_RS25350 (113473) | 113473..113742 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| I6K28_RS26595 (113744) | 113744..114148 | - | 405 | WP_001389361.1 | hypothetical protein | - |
| I6K28_RS26600 (114120) | 114120..114563 | - | 444 | WP_001323891.1 | dehydrogenase | - |
| I6K28_RS25360 (114682) | 114682..114918 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| I6K28_RS25365 (114896) | 114896..115207 | + | 312 | WP_001259758.1 | colicin V | - |
| I6K28_RS25370 (115377) | 115377..117473 | - | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| I6K28_RS25375 (117466) | 117466..118740 | - | 1275 | WP_000489608.1 | HlyD family secretion protein | - |
| I6K28_RS25380 (119351) | 119351..119619 | + | 269 | Protein_138 | type II toxin-antitoxin system antitoxin YacA | - |
| I6K28_RS25385 (119619) | 119619..119744 | + | 126 | Protein_139 | type II toxin-antitoxin system toxin YacB | - |
| I6K28_RS25390 (119912) | 119912..120205 | + | 294 | WP_000269327.1 | DUF6404 family protein | - |
| I6K28_RS26605 (120283) | 120283..120584 | - | 302 | Protein_141 | hypothetical protein | - |
| I6K28_RS25395 (120765) | 120765..121799 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| I6K28_RS25400 (122654) | 122654..124831 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| I6K28_RS25405 (124876) | 124876..125832 | - | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| I6K28_RS25410 (125917) | 125917..127146 | - | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| I6K28_RS25415 (127250) | 127250..130909 | - | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| I6K28_RS25420 (131049) | 131049..132164 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| I6K28_RS25425 (133475) | 133475..134499 | - | 1025 | Protein_148 | integrase core domain-containing protein | - |
| I6K28_RS25430 (135053) | 135053..135252 | + | 200 | Protein_149 | lysis protein | - |
| I6K28_RS25435 (135310) | 135310..135603 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| I6K28_RS25440 (136230) | 136230..137458 | + | 1229 | WP_162858268.1 | IS3 family transposase IS2 | Transposase |
| I6K28_RS25445 (138682) | 138682..139875 | + | 1194 | WP_000450494.1 | GTP-binding protein | - |
| I6K28_RS25450 (140053) | 140053..140202 | + | 150 | Protein_153 | IS3 family transposase IS2 | Transposase |
| I6K28_RS25455 (140512) | 140512..141901 | + | 1390 | Protein_154 | ISNCY family transposase ISKpn21 | Transposase |
| I6K28_RS25460 (142136) | 142136..143077 | + | 942 | WP_000974762.1 | hypothetical protein | - |
| I6K28_RS25465 (143206) | 143206..143400 | - | 195 | Protein_156 | IS200-IS605 family transposase IS200C | Transposase |
| I6K28_RS25470 (143874) | 143874..145244 | - | 1371 | WP_012512746.1 | efflux transporter outer membrane subunit | - |
| I6K28_RS25475 (145248) | 145248..147188 | - | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| I6K28_RS25480 (147185) | 147185..148372 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| I6K28_RS26610 (148967) | 148967..149307 | - | 341 | Protein_160 | IS3 family transposase | - |
| I6K28_RS25485 (149353) | 149353..149678 | + | 326 | Protein_161 | IS3 family transposase IS911 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|