MGE detailed information
MGE type: Prophage MGE length: 58499 bp
Accession: NZ_CP070098 Location: 1655810..1714308 Organism: Escherichia coli strain FDAARGOS_1370 Replicon: chromosome
Accession: NZ_CP070098 Location: 1655810..1714308 Organism: Escherichia coli strain FDAARGOS_1370 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L00_RS08425 (1651200) | 1651200..1651898 | + | 699 | WP_020233615.1 | GntR family transcriptional regulator | - |
| I6L00_RS08430 (1651943) | 1651943..1652842 | - | 900 | WP_000087220.1 | O-acetylserine/cysteine exporter | - |
| I6L00_RS08435 (1653037) | 1653037..1654224 | + | 1188 | WP_001523325.1 | efflux MFS transporter YdeE | - |
| I6L00_RS08440 (1654351) | 1654351..1654446 | + | 96 | WP_000901367.1 | protein MgtS | - |
| I6L00_RS25660 (1654446) | 1654446..1654550 | + | 105 | WP_211180496.1 | protein MgtT | - |
| I6L00_RS08445 (1654665) | 1654665..1655555 | - | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
| I6L00_RS08450 (1655810) | 1655810..1656202 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| I6L00_RS25815 (1656442) | 1656442..1656522 | + | 81 | Protein_1536 | hypothetical protein | - |
| I6L00_RS08455 (1656567) | 1656567..1658612 | - | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| I6L00_RS08460 (1658749) | 1658749..1659495 | + | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| I6L00_RS08465 (1659584) | 1659584..1660270 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| I6L00_RS08470 (1660448) | 1660448..1660651 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I6L00_RS08475 (1660687) | 1660687..1662147 | - | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| I6L00_RS08480 (1662236) | 1662236..1663519 | - | 1284 | Protein_1542 | MHS family MFS transporter YdfJ | - |
| I6L00_RS08485 (1664123) | 1664123..1664236 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| I6L00_RS08490 (1664305) | 1664305..1664538 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6L00_RS08495 (1664855) | 1664855..1665445 | + | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6L00_RS08500 (1665543) | 1665543..1665653 | - | 111 | Protein_1546 | tail fiber assembly protein | - |
| I6L00_RS08505 (1665673) | 1665673..1665966 | - | 294 | WP_000355609.1 | hypothetical protein | - |
| I6L00_RS08510 (1665977) | 1665977..1666681 | - | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| I6L00_RS08515 (1666691) | 1666691..1666972 | - | 282 | WP_000654154.1 | hypothetical protein | - |
| I6L00_RS08520 (1666969) | 1666969..1669368 | - | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6L00_RS08525 (1669489) | 1669489..1669947 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6L00_RS08530 (1670144) | 1670144..1670743 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| I6L00_RS08535 (1670811) | 1670811..1674290 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6L00_RS08540 (1674351) | 1674351..1674892 | - | 542 | Protein_1554 | tail assembly protein | - |
| I6L00_RS08545 (1674889) | 1674889..1675632 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| I6L00_RS08550 (1675638) | 1675638..1676336 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| I6L00_RS08555 (1676336) | 1676336..1676665 | - | 330 | WP_000847345.1 | phage tail protein | - |
| I6L00_RS08560 (1676662) | 1676662..1679223 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| I6L00_RS08565 (1679216) | 1679216..1679650 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| I6L00_RS08570 (1679632) | 1679632..1680054 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| I6L00_RS08575 (1680070) | 1680070..1680810 | - | 741 | WP_001349920.1 | phage tail protein | - |
| I6L00_RS08580 (1680818) | 1680818..1681213 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| I6L00_RS08585 (1681210) | 1681210..1681788 | - | 579 | WP_000975070.1 | phage tail protein | - |
| I6L00_RS08590 (1681800) | 1681800..1682153 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| I6L00_RS08595 (1682165) | 1682165..1682563 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| I6L00_RS08600 (1682605) | 1682605..1683630 | - | 1026 | WP_033550722.1 | major capsid protein | - |
| I6L00_RS08605 (1683685) | 1683685..1684017 | - | 333 | WP_001708751.1 | head decoration protein | - |
| I6L00_RS08610 (1684027) | 1684027..1685346 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| I6L00_RS08615 (1685327) | 1685327..1686928 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| I6L00_RS08620 (1686925) | 1686925..1687131 | - | 207 | WP_000198149.1 | gpW family protein | - |
| I6L00_RS08625 (1687128) | 1687128..1689053 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| I6L00_RS08630 (1689028) | 1689028..1689573 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I6L00_RS08635 (1689962) | 1689962..1690195 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6L00_RS08640 (1690253) | 1690253..1690663 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6L00_RS08645 (1690815) | 1690815..1690988 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6L00_RS08650 (1691160) | 1691160..1691390 | - | 231 | WP_000720962.1 | protein YnfN | - |
| I6L00_RS08655 (1691395) | 1691395..1691460 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| I6L00_RS08660 (1691463) | 1691463..1691651 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I6L00_RS08665 (1691662) | 1691662..1691874 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6L00_RS08670 (1692237) | 1692237..1692734 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6L00_RS08675 (1692731) | 1692731..1693264 | - | 534 | WP_001092971.1 | lysozyme | - |
| I6L00_RS08680 (1693261) | 1693261..1693572 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| I6L00_RS08685 (1693577) | 1693577..1693792 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6L00_RS25665 (1694012) | 1694012..1694182 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I6L00_RS08690 (1694348) | 1694348..1694806 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6L00_RS08695 (1695257) | 1695257..1695472 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6L00_RS08700 (1695773) | 1695773..1695985 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I6L00_RS08705 (1696040) | 1696040..1696129 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I6L00_RS08710 (1696407) | 1696407..1697159 | - | 753 | WP_001047135.1 | antitermination protein | - |
| I6L00_RS08715 (1697173) | 1697173..1698222 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| I6L00_RS08720 (1698224) | 1698224..1698502 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I6L00_RS08725 (1698569) | 1698569..1698820 | - | 252 | WP_000980994.1 | protein Rem | - |
| I6L00_RS08730 (1699037) | 1699037..1699192 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6L00_RS08735 (1699264) | 1699264..1699551 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6L00_RS08740 (1699551) | 1699551..1699790 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I6L00_RS08745 (1699815) | 1699815..1700120 | + | 306 | WP_001326990.1 | protein YdfV | - |
| I6L00_RS08750 (1700323) | 1700323..1700655 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| I6L00_RS25820 (1701092) | 1701092..1701241 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6L00_RS08755 (1701362) | 1701362..1702384 | - | 1023 | Protein_1599 | ISNCY family transposase ISCARN112 | Transposase |
| I6L00_RS08760 (1702889) | 1702889..1703911 | - | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| I6L00_RS08765 (1703914) | 1703914..1704528 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| I6L00_RS08770 (1704737) | 1704737..1705402 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| I6L00_RS08775 (1705605) | 1705605..1706003 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| I6L00_RS08780 (1706044) | 1706044..1707009 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| I6L00_RS08785 (1706990) | 1706990..1707511 | - | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| I6L00_RS08790 (1707495) | 1707495..1707722 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| I6L00_RS08795 (1707803) | 1707803..1708210 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| I6L00_RS08800 (1708379) | 1708379..1708534 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I6L00_RS26015 (1708536) | 1708536..1708637 | + | 102 | Protein_1609 | protein YdfB | - |
| I6L00_RS08810 (1709598) | 1709598..1709786 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I6L00_RS08815 (1709783) | 1709783..1709974 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| I6L00_RS08820 (1710068) | 1710068..1712539 | + | 2472 | WP_000048363.1 | exonuclease | - |
| I6L00_RS08825 (1712612) | 1712612..1712863 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| I6L00_RS08830 (1712898) | 1712898..1714178 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6L00_RS08840 (1714366) | 1714366..1715385 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| I6L00_RS08845 (1715397) | 1715397..1716611 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6L00_RS08850 (1716817) | 1716817..1717143 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| I6L00_RS08855 (1717278) | 1717278..1717619 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| I6L00_RS08860 (1717654) | 1717654..1718214 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| I6L00_RS08865 (1718217) | 1718217..1718915 | - | 699 | WP_126709151.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|