MGE detailed information
MGE type: Prophage MGE length: 48340 bp
Accession: NZ_CP070098 Location: 1405096..1453435 Organism: Escherichia coli strain FDAARGOS_1370 Replicon: chromosome
Accession: NZ_CP070098 Location: 1405096..1453435 Organism: Escherichia coli strain FDAARGOS_1370 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L00_RS07260 (1400592) | 1400592..1400891 | - | 300 | Protein_1290 | sensor domain-containing diguanylate cyclase | - |
| I6L00_RS25650 (1401085) | 1401085..1401132 | + | 48 | WP_211180494.1 | protein YnaN | - |
| I6L00_RS07265 (1401146) | 1401146..1402129 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| I6L00_RS26005 (1402404) | 1402404..1402577 | + | 174 | WP_001296046.1 | protein YnaL | - |
| I6L00_RS07270 (1402607) | 1402607..1403980 | + | 1374 | WP_000123748.1 | ATP-dependent RNA helicase DbpA | - |
| I6L00_RS07275 (1404109) | 1404109..1405044 | - | 936 | WP_001523172.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| I6L00_RS07280 (1405096) | 1405096..1406331 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6L00_RS07285 (1406333) | 1406333..1406548 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (1406652) | 1406652..1406830 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1406652) | 1406652..1406830 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1406652) | 1406652..1406830 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1406652) | 1406652..1406830 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| I6L00_RS07290 (1406648) | 1406648..1406836 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| I6L00_RS07295 (1406874) | 1406874..1407023 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| I6L00_RS07300 (1407079) | 1407079..1407888 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| I6L00_RS07305 (1407881) | 1407881..1410481 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| I6L00_RS07310 (1410583) | 1410583..1410858 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| I6L00_RS07315 (1410933) | 1410933..1411103 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| I6L00_RS07320 (1411103) | 1411103..1411324 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| I6L00_RS07325 (1411766) | 1411766..1412254 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| I6L00_RS07330 (1412251) | 1412251..1412406 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| I6L00_RS26010 (1412417) | 1412417..1412551 | - | 135 | WP_000233809.1 | phage protein | - |
| I6L00_RS07335 (1412839) | 1412839..1413258 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| I6L00_RS07340 (1413338) | 1413338..1413592 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| I6L00_RS07345 (1413589) | 1413589..1414011 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| I6L00_RS07350 (1414089) | 1414089..1414877 | + | 789 | WP_001396581.1 | hypothetical protein | - |
| I6L00_RS07355 (1414884) | 1414884..1415630 | + | 747 | WP_020233967.1 | ATP-binding protein | - |
| I6L00_RS07360 (1415653) | 1415653..1416414 | + | 762 | WP_000450716.1 | DUF1627 domain-containing protein | - |
| I6L00_RS07365 (1416430) | 1416430..1416852 | + | 423 | WP_029702111.1 | DUF977 family protein | - |
| I6L00_RS07370 (1417014) | 1417014..1417517 | + | 504 | WP_000137958.1 | hypothetical protein | - |
| I6L00_RS07375 (1417638) | 1417638..1418411 | - | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| I6L00_RS07380 (1418934) | 1418934..1419059 | + | 126 | WP_001445775.1 | Hok/Gef family protein | - |
| I6L00_RS07385 (1419142) | 1419142..1419483 | - | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| I6L00_RS07390 (1420351) | 1420351..1420950 | + | 600 | WP_000940344.1 | DUF1367 family protein | - |
| I6L00_RS07395 (1420950) | 1420950..1421240 | + | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| I6L00_RS07400 (1421237) | 1421237..1421779 | + | 543 | WP_000640106.1 | DUF1133 family protein | - |
| I6L00_RS07405 (1422001) | 1422001..1422570 | + | 570 | WP_001208722.1 | hypothetical protein | - |
| I6L00_RS07410 (1422539) | 1422539..1422754 | - | 216 | WP_152948782.1 | hypothetical protein | - |
| I6L00_RS07415 (1422918) | 1422918..1423259 | + | 342 | WP_000781775.1 | phage holin, lambda family | - |
| I6L00_RS07420 (1423263) | 1423263..1423739 | + | 477 | WP_023153991.1 | glycoside hydrolase family protein | - |
| I6L00_RS07425 (1423956) | 1423956..1424141 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| I6L00_RS07430 (1424338) | 1424338..1425795 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| I6L00_RS25795 (1425933) | 1425933..1426190 | + | 258 | Protein_1328 | ParB/Srx family N-terminal domain-containing protein | - |
| I6L00_RS07440 (1426717) | 1426717..1427649 | + | 933 | WP_033550553.1 | hypothetical protein | - |
| I6L00_RS07445 (1427627) | 1427627..1427836 | + | 210 | WP_000126788.1 | hypothetical protein | - |
| I6L00_RS07450 (1427840) | 1427840..1428934 | + | 1095 | WP_000089448.1 | terminase small subunit | - |
| I6L00_RS07455 (1428915) | 1428915..1430216 | + | 1302 | WP_000625348.1 | terminase family protein | - |
| I6L00_RS07460 (1430219) | 1430219..1431625 | + | 1407 | WP_000763701.1 | DUF4055 domain-containing protein | - |
| I6L00_RS07465 (1431609) | 1431609..1432721 | + | 1113 | WP_001363932.1 | phage minor head protein | - |
| I6L00_RS07470 (1432826) | 1432826..1433590 | + | 765 | WP_000770042.1 | hypothetical protein | - |
| I6L00_RS07475 (1433689) | 1433689..1434222 | + | 534 | Protein_1336 | P22 coat - protein 5 family protein | - |
| I6L00_RS07480 (1434328) | 1434328..1435536 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| I6L00_RS07485 (1435549) | 1435549..1436166 | + | 618 | Protein_1338 | P22 coat - protein 5 family protein | - |
| I6L00_RS07490 (1436209) | 1436209..1436385 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| I6L00_RS07495 (1436389) | 1436389..1436784 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| I6L00_RS07500 (1436784) | 1436784..1437167 | + | 384 | WP_000524260.1 | hypothetical protein | - |
| I6L00_RS07505 (1437168) | 1437168..1437548 | + | 381 | WP_001029815.1 | hypothetical protein | - |
| I6L00_RS07510 (1437545) | 1437545..1437937 | + | 393 | WP_000673077.1 | phage tail terminator-like protein | - |
| I6L00_RS07515 (1437964) | 1437964..1438926 | + | 963 | WP_001328756.1 | phage tail tube protein | - |
| I6L00_RS07520 (1439077) | 1439077..1439436 | + | 360 | WP_122452218.1 | protein YdaY | - |
| I6L00_RS07525 (1439544) | 1439544..1439744 | + | 201 | WP_032139919.1 | hypothetical protein | - |
| I6L00_RS07530 (1439908) | 1439908..1443141 | + | 3234 | WP_023153989.1 | phage tail tape measure protein | - |
| I6L00_RS07535 (1443134) | 1443134..1443472 | + | 339 | WP_000024051.1 | phage tail protein | - |
| I6L00_RS07540 (1443472) | 1443472..1444170 | + | 699 | WP_001152432.1 | phage minor tail protein L | - |
| I6L00_RS07545 (1444176) | 1444176..1444919 | + | 744 | WP_001351716.1 | C40 family peptidase | - |
| I6L00_RS07550 (1444916) | 1444916..1445457 | + | 542 | Protein_1351 | tail assembly protein | - |
| I6L00_RS07555 (1445518) | 1445518..1448997 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6L00_RS07560 (1449065) | 1449065..1449664 | + | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| I6L00_RS07565 (1449729) | 1449729..1452104 | + | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6L00_RS07570 (1452104) | 1452104..1452385 | + | 282 | WP_000654155.1 | hypothetical protein | - |
| I6L00_RS07575 (1452395) | 1452395..1453435 | + | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| I6L00_RS07580 (1453478) | 1453478..1453771 | + | 294 | WP_001405873.1 | hypothetical protein | - |
| I6L00_RS07585 (1454041) | 1454041..1454227 | - | 187 | Protein_1358 | DinI-like family protein | - |
| I6L00_RS07590 (1454317) | 1454317..1455111 | - | 795 | WP_000354607.1 | hypothetical protein | - |
| I6L00_RS07595 (1455584) | 1455584..1456441 | - | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| I6L00_RS07600 (1456438) | 1456438..1457295 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| I6L00_RS07605 (1457292) | 1457292..1458119 | - | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|