MGE detailed information
MGE type: Prophage MGE length: 54014 bp
Accession: NZ_CP070077 Location: 4567430..4621443 Organism: Escherichia coli strain FDAARGOS_1371 Replicon: chromosome
Accession: NZ_CP070077 Location: 4567430..4621443 Organism: Escherichia coli strain FDAARGOS_1371 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L01_RS21535 (4562823) | 4562823..4563521 | + | 699 | WP_126709151.1 | YnfC family lipoprotein | - |
| I6L01_RS21540 (4563524) | 4563524..4564084 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| I6L01_RS21545 (4564119) | 4564119..4564460 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| I6L01_RS21550 (4564595) | 4564595..4564921 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| I6L01_RS21555 (4565127) | 4565127..4566341 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6L01_RS21560 (4566353) | 4566353..4567372 | + | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| I6L01_RS21570 (4567560) | 4567560..4568840 | - | 1281 | WP_021523105.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| I6L01_RS21575 (4568875) | 4568875..4569126 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| I6L01_RS21580 (4569199) | 4569199..4571670 | - | 2472 | WP_000048363.1 | exonuclease | - |
| I6L01_RS21585 (4571764) | 4571764..4571955 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| I6L01_RS21590 (4571952) | 4571952..4572140 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I6L01_RS24875 (4573101) | 4573101..4573202 | - | 102 | Protein_4237 | protein YdfB | - |
| I6L01_RS21600 (4573204) | 4573204..4573359 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I6L01_RS21605 (4573528) | 4573528..4573935 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| I6L01_RS21610 (4574016) | 4574016..4574243 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| I6L01_RS21615 (4574227) | 4574227..4574748 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| I6L01_RS21620 (4574729) | 4574729..4575694 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| I6L01_RS21625 (4575735) | 4575735..4576133 | + | 399 | Protein_4243 | DUF977 family protein | - |
| I6L01_RS21630 (4576336) | 4576336..4577001 | + | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| I6L01_RS21635 (4577210) | 4577210..4577824 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| I6L01_RS21640 (4577827) | 4577827..4578849 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| I6L01_RS21645 (4579354) | 4579354..4580376 | + | 1023 | Protein_4247 | ISNCY family transposase ISCARN112 | Transposase |
| I6L01_RS24765 (4580497) | 4580497..4580646 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6L01_RS21650 (4581083) | 4581083..4581415 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| I6L01_RS21655 (4581618) | 4581618..4581923 | - | 306 | WP_001326990.1 | protein YdfV | - |
| I6L01_RS21660 (4581948) | 4581948..4582187 | + | 240 | WP_204628246.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| I6L01_RS21665 (4582187) | 4582187..4582474 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6L01_RS21670 (4582546) | 4582546..4582701 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6L01_RS21675 (4582918) | 4582918..4583169 | + | 252 | WP_000980994.1 | protein Rem | - |
| I6L01_RS21680 (4583236) | 4583236..4583514 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| I6L01_RS21685 (4583516) | 4583516..4584565 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| I6L01_RS21690 (4584579) | 4584579..4585331 | + | 753 | WP_001047135.1 | antitermination protein | - |
| I6L01_RS21695 (4585609) | 4585609..4585698 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| I6L01_RS21700 (4585753) | 4585753..4585965 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I6L01_RS21705 (4586266) | 4586266..4586481 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6L01_RS21710 (4586932) | 4586932..4587390 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6L01_RS24525 (4587556) | 4587556..4587726 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I6L01_RS21715 (4587946) | 4587946..4588161 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6L01_RS21720 (4588166) | 4588166..4588477 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| I6L01_RS21725 (4588474) | 4588474..4589007 | + | 534 | WP_001092971.1 | lysozyme | - |
| I6L01_RS21730 (4589004) | 4589004..4589501 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6L01_RS21735 (4589864) | 4589864..4590076 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6L01_RS21740 (4590087) | 4590087..4590275 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| I6L01_RS21745 (4590278) | 4590278..4590343 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| I6L01_RS21750 (4590348) | 4590348..4590578 | + | 231 | WP_000720962.1 | protein YnfN | - |
| I6L01_RS21755 (4590750) | 4590750..4590923 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6L01_RS21760 (4591075) | 4591075..4591485 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6L01_RS21765 (4591543) | 4591543..4591776 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6L01_RS21770 (4592165) | 4592165..4592710 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I6L01_RS21775 (4592685) | 4592685..4594610 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| I6L01_RS21780 (4594607) | 4594607..4594813 | + | 207 | WP_000198149.1 | gpW family protein | - |
| I6L01_RS21785 (4594810) | 4594810..4596411 | + | 1602 | WP_001356819.1 | phage portal protein | - |
| I6L01_RS21790 (4596392) | 4596392..4597711 | + | 1320 | WP_020233915.1 | S49 family peptidase | - |
| I6L01_RS21795 (4597721) | 4597721..4598053 | + | 333 | WP_001708751.1 | head decoration protein | - |
| I6L01_RS21800 (4598108) | 4598108..4599133 | + | 1026 | WP_033550722.1 | major capsid protein | - |
| I6L01_RS21805 (4599175) | 4599175..4599573 | + | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| I6L01_RS21810 (4599585) | 4599585..4599938 | + | 354 | WP_000752979.1 | head-tail joining protein | - |
| I6L01_RS21815 (4599950) | 4599950..4600528 | + | 579 | WP_000975070.1 | phage tail protein | - |
| I6L01_RS21820 (4600525) | 4600525..4600920 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| I6L01_RS21825 (4600928) | 4600928..4601668 | + | 741 | WP_001349920.1 | phage tail protein | - |
| I6L01_RS21830 (4601684) | 4601684..4602106 | + | 423 | WP_000479153.1 | phage minor tail protein G | - |
| I6L01_RS21835 (4602088) | 4602088..4602522 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| I6L01_RS21840 (4602515) | 4602515..4605076 | + | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| I6L01_RS21845 (4605073) | 4605073..4605402 | + | 330 | WP_000847345.1 | phage tail protein | - |
| I6L01_RS21850 (4605402) | 4605402..4606100 | + | 699 | WP_001551186.1 | phage minor tail protein L | - |
| I6L01_RS21855 (4606106) | 4606106..4606849 | + | 744 | WP_032153655.1 | C40 family peptidase | - |
| I6L01_RS21860 (4606846) | 4606846..4607387 | + | 542 | Protein_4292 | tail assembly protein | - |
| I6L01_RS21865 (4607448) | 4607448..4610927 | + | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6L01_RS21870 (4610995) | 4610995..4611594 | + | 600 | WP_001542091.1 | hypothetical protein | VF |
| I6L01_RS21875 (4611659) | 4611659..4614058 | + | 2400 | WP_032152843.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6L01_RS21880 (4614055) | 4614055..4614336 | + | 282 | WP_000654154.1 | hypothetical protein | - |
| I6L01_RS21885 (4614346) | 4614346..4615050 | + | 705 | WP_000235967.1 | tail fiber domain-containing protein | - |
| I6L01_RS21890 (4615061) | 4615061..4615354 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| I6L01_RS21895 (4615374) | 4615374..4615484 | + | 111 | Protein_4299 | tail fiber assembly protein | - |
| I6L01_RS21900 (4615582) | 4615582..4616172 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| I6L01_RS21905 (4616489) | 4616489..4616722 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| I6L01_RS21910 (4616791) | 4616791..4616904 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| I6L01_RS21915 (4617508) | 4617508..4618791 | + | 1284 | Protein_4303 | MHS family MFS transporter YdfJ | - |
| I6L01_RS21920 (4618880) | 4618880..4620340 | + | 1461 | WP_000527786.1 | mannitol dehydrogenase family protein | - |
| I6L01_RS21925 (4620376) | 4620376..4620579 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| I6L01_RS21930 (4620757) | 4620757..4621443 | - | 687 | WP_000215553.1 | DNA-binding transcriptional regulator rspR | - |
| I6L01_RS21935 (4621532) | 4621532..4622278 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| I6L01_RS21940 (4622415) | 4622415..4624460 | + | 2046 | WP_001523328.1 | peptidyl-dipeptidase Dcp | - |
| I6L01_RS24770 (4624505) | 4624505..4624585 | - | 81 | Protein_4309 | hypothetical protein | - |
| I6L01_RS21945 (4624825) | 4624825..4625217 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| I6L01_RS21950 (4625472) | 4625472..4626362 | + | 891 | WP_001523326.1 | diguanylate cyclase DgcZ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|