MGE detailed information
MGE type: Genomic_island MGE length: 20354 bp
Accession: NZ_CP069996 Location: 934258..954611 Organism: Escherichia coli strain FDAARGOS_1300 Replicon: chromosome
Accession: NZ_CP069996 Location: 934258..954611 Organism: Escherichia coli strain FDAARGOS_1300 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K30_RS04565 (929623) | 929623..930081 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| I6K30_RS04570 (930342) | 930342..931799 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K30_RS04575 (931856) | 931856..932470 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K30_RS04580 (932467) | 932467..933606 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K30_RS04585 (933796) | 933796..934248 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K30_RS04590 (934258) | 934258..934656 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K30_RS04595 (934659) | 934659..934952 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K30_RS04600 (935004) | 935004..936059 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K30_RS04605 (936130) | 936130..936915 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| I6K30_RS04610 (936887) | 936887..938599 | + | 1713 | Protein_907 | hypothetical protein | VF |
| I6K30_RS04615 (938678) | 938678..938836 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K30_RS04620 (938919) | 938919..939416 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| I6K30_RS04625 (939592) | 939592..940341 | - | 750 | WP_000093934.1 | Putative antitoxin YwqK | VF |
| I6K30_RS04630 (940653) | 940653..941393 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K30_RS04635 (941364) | 941364..942131 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K30_RS04640 (942336) | 942336..942914 | - | 579 | WP_000284050.1 | Protein-L-isoaspartate O-methyltransferase | VF |
| I6K30_RS04645 (943154) | 943154..945598 | + | 2445 | WP_000973137.1 | hypothetical protein | VF |
| I6K30_RS04650 (945641) | 945641..946087 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K30_RS04655 (946268) | 946268..947038 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K30_RS04660 (947089) | 947089..947283 | - | 195 | Protein_917 | ISAs1 family transposase | - |
| I6K30_RS04665 (947309) | 947309..947797 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K30_RS04670 (948008) | 948008..948394 | - | 387 | WP_001513602.1 | hypothetical protein | - |
| I6K30_RS04675 (948623) | 948623..949387 | - | 765 | Protein_920 | ISAs1 family transposase ISEc1 | Transposase |
| I6K30_RS04680 (949645) | 949645..949935 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K30_RS04685 (949910) | 949910..951349 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K30_RS04690 (951342) | 951342..952388 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K30_RS04695 (952495) | 952495..954476 | - | 1982 | Protein_924 | hypothetical protein | VF |
| I6K30_RS04700 (954697) | 954697..955215 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K30_RS04705 (955921) | 955921..956424 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| I6K30_RS04710 (956447) | 956447..957931 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| I6K30_RS04715 (957936) | 957936..958361 | + | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|