MGE detailed information
MGE type: Genomic_island MGE length: 18131 bp
Accession: NZ_CP069990 Location: 2554629..2572759 Organism: Escherichia coli strain FDAARGOS_1304 Replicon: chromosome
Accession: NZ_CP069990 Location: 2554629..2572759 Organism: Escherichia coli strain FDAARGOS_1304 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K34_RS12465 (2549994) | 2549994..2550452 | - | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| I6K34_RS12470 (2550713) | 2550713..2552170 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| I6K34_RS12475 (2552227) | 2552227..2552841 | - | 615 | WP_000602123.1 | peptide chain release factor H | - |
| I6K34_RS12480 (2552838) | 2552838..2553977 | - | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| I6K34_RS12485 (2554167) | 2554167..2554619 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| I6K34_RS12490 (2554629) | 2554629..2555027 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| I6K34_RS12495 (2555030) | 2555030..2555323 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| I6K34_RS12500 (2555375) | 2555375..2556430 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| I6K34_RS12505 (2556501) | 2556501..2557286 | - | 786 | WP_000207544.1 | hypothetical protein | VF |
| I6K34_RS12510 (2557258) | 2557258..2558970 | + | 1713 | Protein_2472 | hypothetical protein | VF |
| I6K34_RS12515 (2559049) | 2559049..2559207 | + | 159 | WP_014639450.1 | hypothetical protein | - |
| I6K34_RS12520 (2559290) | 2559290..2559787 | - | 498 | WP_079437275.1 | REP-associated tyrosine transposase RayT | - |
| I6K34_RS12525 (2559963) | 2559963..2560712 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| I6K34_RS12530 (2561024) | 2561024..2561764 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| I6K34_RS12535 (2561735) | 2561735..2562502 | - | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| I6K34_RS12540 (2562707) | 2562707..2563285 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| I6K34_RS12545 (2563525) | 2563525..2565969 | + | 2445 | WP_000973137.1 | hypothetical protein | VF |
| I6K34_RS12550 (2566012) | 2566012..2566458 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| I6K34_RS12555 (2566639) | 2566639..2567409 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| I6K34_RS12560 (2567460) | 2567460..2567654 | - | 195 | Protein_2482 | ISAs1 family transposase | - |
| I6K34_RS12565 (2567680) | 2567680..2568168 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| I6K34_RS12570 (2568262) | 2568262..2568765 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| I6K34_RS12575 (2568994) | 2568994..2569758 | - | 765 | Protein_2485 | ISAs1 family transposase ISEc1 | Transposase |
| I6K34_RS12580 (2570016) | 2570016..2570306 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| I6K34_RS12585 (2570281) | 2570281..2571720 | - | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| I6K34_RS12590 (2571713) | 2571713..2572759 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| I6K34_RS12595 (2572866) | 2572866..2574848 | - | 1983 | WP_000053636.1 | type VI secretion system tip protein VgrG | - |
| I6K34_RS12600 (2575069) | 2575069..2575587 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| I6K34_RS12605 (2576293) | 2576293..2576796 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|