MGE detailed information
MGE type: Prophage MGE length: 51722 bp
Accession: NZ_CP069973 Location: 3848200..3899921 Organism: Escherichia coli strain FDAARGOS_1280 Replicon: chromosome
Accession: NZ_CP069973 Location: 3848200..3899921 Organism: Escherichia coli strain FDAARGOS_1280 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K10_RS19265 (3843516) | 3843516..3844343 | + | 828 | WP_029702064.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| I6K10_RS19270 (3844340) | 3844340..3845197 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| I6K10_RS19275 (3845194) | 3845194..3846051 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| I6K10_RS19280 (3846524) | 3846524..3847318 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| I6K10_RS19285 (3847408) | 3847408..3847594 | + | 187 | Protein_3606 | DinI-like family protein | - |
| I6K10_RS19290 (3847864) | 3847864..3848157 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| I6K10_RS19295 (3848200) | 3848200..3849240 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| I6K10_RS19300 (3849250) | 3849250..3849531 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| I6K10_RS19305 (3849531) | 3849531..3851906 | - | 2376 | WP_042099016.1 | prophage tail fiber N-terminal domain-containing protein | - |
| I6K10_RS19310 (3851971) | 3851971..3852570 | - | 600 | WP_001542091.1 | Outer membrane protein X | VF |
| I6K10_RS19315 (3852638) | 3852638..3856117 | - | 3480 | WP_021523093.1 | host specificity protein J | - |
| I6K10_RS19320 (3856178) | 3856178..3856780 | - | 603 | WP_049286672.1 | tail assembly protein | - |
| I6K10_RS19325 (3856717) | 3856717..3857460 | - | 744 | WP_032153655.1 | C40 family peptidase | - |
| I6K10_RS19330 (3857466) | 3857466..3858164 | - | 699 | WP_001551186.1 | phage minor tail protein L | - |
| I6K10_RS19335 (3858164) | 3858164..3858493 | - | 330 | WP_000847345.1 | phage tail protein | - |
| I6K10_RS19340 (3858490) | 3858490..3861051 | - | 2562 | WP_032153656.1 | phage tail tape measure protein | - |
| I6K10_RS19345 (3861044) | 3861044..3861478 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| I6K10_RS19350 (3861460) | 3861460..3861882 | - | 423 | WP_000479153.1 | phage minor tail protein G | - |
| I6K10_RS19355 (3861898) | 3861898..3862638 | - | 741 | WP_001349920.1 | phage tail protein | - |
| I6K10_RS19360 (3862646) | 3862646..3863041 | - | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| I6K10_RS19365 (3863038) | 3863038..3863616 | - | 579 | WP_000975070.1 | phage tail protein | - |
| I6K10_RS19370 (3863628) | 3863628..3863981 | - | 354 | WP_000752979.1 | head-tail joining protein | - |
| I6K10_RS19375 (3863993) | 3863993..3864391 | - | 399 | WP_020233914.1 | DNA-packaging protein FI | - |
| I6K10_RS19380 (3864433) | 3864433..3865458 | - | 1026 | WP_000063277.1 | major capsid protein | - |
| I6K10_RS19385 (3865513) | 3865513..3865845 | - | 333 | WP_001708751.1 | head decoration protein | - |
| I6K10_RS19390 (3865855) | 3865855..3867174 | - | 1320 | WP_020233915.1 | S49 family peptidase | - |
| I6K10_RS19395 (3867155) | 3867155..3868756 | - | 1602 | WP_001356819.1 | phage portal protein | - |
| I6K10_RS19400 (3868753) | 3868753..3868959 | - | 207 | WP_000198149.1 | gpW family protein | - |
| I6K10_RS19405 (3868956) | 3868956..3870881 | - | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| I6K10_RS19410 (3870856) | 3870856..3871401 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| I6K10_RS19415 (3871790) | 3871790..3872023 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| I6K10_RS19420 (3872081) | 3872081..3872491 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| I6K10_RS19425 (3872643) | 3872643..3872816 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| I6K10_RS19430 (3872988) | 3872988..3873218 | - | 231 | WP_000720962.1 | protein YnfN | - |
| I6K10_RS19435 (3873223) | 3873223..3873288 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| I6K10_RS19440 (3873291) | 3873291..3873479 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| I6K10_RS19445 (3873490) | 3873490..3873702 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| I6K10_RS19450 (3874065) | 3874065..3874562 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| I6K10_RS19455 (3874559) | 3874559..3875092 | - | 534 | WP_001092971.1 | lysozyme | - |
| I6K10_RS19460 (3875089) | 3875089..3875400 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| I6K10_RS19465 (3875405) | 3875405..3875620 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| I6K10_RS26870 (3875840) | 3875840..3876010 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| I6K10_RS19470 (3876177) | 3876177..3876635 | - | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| I6K10_RS19475 (3877086) | 3877086..3877301 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| I6K10_RS19480 (3877602) | 3877602..3877814 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| I6K10_RS19485 (3877869) | 3877869..3877958 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| I6K10_RS19490 (3878236) | 3878236..3878988 | - | 753 | WP_001047135.1 | antitermination protein | - |
| I6K10_RS19495 (3879002) | 3879002..3880051 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| I6K10_RS19500 (3880053) | 3880053..3880331 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| I6K10_RS19505 (3880398) | 3880398..3880649 | - | 252 | WP_000980994.1 | protein Rem | - |
| I6K10_RS19510 (3880866) | 3880866..3881021 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| I6K10_RS19515 (3881093) | 3881093..3881380 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| I6K10_RS19520 (3881380) | 3881380..3881619 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| I6K10_RS19525 (3881644) | 3881644..3881949 | + | 306 | WP_001326990.1 | protein YdfV | - |
| I6K10_RS19530 (3882152) | 3882152..3882484 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| I6K10_RS27110 (3882921) | 3882921..3883070 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| I6K10_RS19535 (3883191) | 3883191..3884213 | - | 1023 | Protein_3658 | ISNCY family transposase ISCARN112 | Transposase |
| I6K10_RS19540 (3884718) | 3884718..3885740 | - | 1023 | WP_251301666.1 | DUF4868 domain-containing protein | - |
| I6K10_RS19545 (3885743) | 3885743..3886357 | - | 615 | WP_001265627.1 | hypothetical protein | - |
| I6K10_RS19550 (3886566) | 3886566..3887231 | - | 666 | WP_021523102.1 | epoxyqueuosine reductase QueH | - |
| I6K10_RS19555 (3887434) | 3887434..3887832 | - | 399 | WP_001151242.1 | DUF977 family protein | - |
| I6K10_RS19560 (3887873) | 3887873..3888838 | - | 966 | WP_000054487.1 | hypothetical protein | - |
| I6K10_RS19565 (3888819) | 3888819..3889340 | - | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| I6K10_RS19570 (3889324) | 3889324..3889551 | - | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| I6K10_RS19575 (3889632) | 3889632..3890039 | + | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| I6K10_RS19580 (3890208) | 3890208..3890363 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| I6K10_RS27305 (3890365) | 3890365..3890466 | + | 102 | Protein_3668 | protein YdfB | - |
| I6K10_RS19590 (3891427) | 3891427..3891615 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| I6K10_RS19595 (3891612) | 3891612..3891803 | + | 192 | WP_001083276.1 | lysis protein YdfD | - |
| I6K10_RS19600 (3891897) | 3891897..3894368 | + | 2472 | WP_000048363.1 | exonuclease | - |
| I6K10_RS19605 (3894441) | 3894441..3894692 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| I6K10_RS19610 (3894763) | 3894763..3895440 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| I6K10_RS19615 (3895440) | 3895440..3895787 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| I6K10_RS19620 (3895807) | 3895807..3897378 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| I6K10_RS19625 (3897434) | 3897434..3898714 | + | 1281 | WP_021523105.1 | Putative defective protein IntQ ; Integrase | Integrase |
| I6K10_RS19635 (3898902) | 3898902..3899921 | - | 1020 | WP_000836037.1 | Zn-dependent oxidoreductase | - |
| I6K10_RS19640 (3899933) | 3899933..3901147 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| I6K10_RS19645 (3901353) | 3901353..3901679 | - | 327 | WP_001314753.1 | YnfA family protein | - |
| I6K10_RS19650 (3901814) | 3901814..3902155 | + | 342 | WP_000705205.1 | DUF1283 family protein | - |
| I6K10_RS19655 (3902190) | 3902190..3902750 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| I6K10_RS19660 (3902753) | 3902753..3903463 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| I6K10_RS19665 (3903571) | 3903571..3903876 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|